Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CDKL3Q8IVW4 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CDKL3Q8IVW4 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
CDKL3Q8IVW4 AC092451.3-201ENST00000625067 1343 ntBASIC5.79□□□□□ -1.48
CDKL3Q8IVW4 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.79□□□□□ -1.48
CDKL3Q8IVW4 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.79□□□□□ -1.48
CDKL3Q8IVW4 CASC19-260ENST00000641828 2001 ntBASIC5.79□□□□□ -1.48
CDKL3Q8IVW4 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
CDKL3Q8IVW4 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.79□□□□□ -1.48
CDKL3Q8IVW4 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.79□□□□□ -1.48
CDKL3Q8IVW4 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.79□□□□□ -1.48
CDKL3Q8IVW4 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CDKL3Q8IVW4 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
CDKL3Q8IVW4 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
CDKL3Q8IVW4 MED28P3-201ENST00000444288 531 ntBASIC5.79□□□□□ -1.48
CDKL3Q8IVW4 SNRPCP3-201ENST00000474888 476 ntBASIC5.79□□□□□ -1.48
CDKL3Q8IVW4 RPS3AP15-201ENST00000483874 781 ntBASIC5.79□□□□□ -1.48
CDKL3Q8IVW4 RN7SL649P-201ENST00000496974 275 ntBASIC5.79□□□□□ -1.48
CDKL3Q8IVW4 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.79□□□□□ -1.48
CDKL3Q8IVW4 RN7SKP253-201ENST00000516424 309 ntBASIC5.79□□□□□ -1.48
CDKL3Q8IVW4 AC060775.1-201ENST00000518241 520 ntBASIC5.79□□□□□ -1.48
CDKL3Q8IVW4 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CDKL3Q8IVW4 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.79□□□□□ -1.48
CDKL3Q8IVW4 AC068305.2-201ENST00000550567 1205 ntBASIC5.79□□□□□ -1.48
CDKL3Q8IVW4 HSPE1P2-201ENST00000554777 306 ntBASIC5.79□□□□□ -1.48
CDKL3Q8IVW4 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC5.79□□□□□ -1.48
CDKL3Q8IVW4 MIR6780B-201ENST00000610307 79 ntBASIC5.79□□□□□ -1.48
CDKL3Q8IVW4 MIR6133-201ENST00000617057 108 ntBASIC5.79□□□□□ -1.48
CDKL3Q8IVW4 AC025262.3-201ENST00000623666 360 ntBASIC5.79□□□□□ -1.48
CDKL3Q8IVW4 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.79□□□□□ -1.48
CDKL3Q8IVW4 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CDKL3Q8IVW4 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.79□□□□□ -1.48
CDKL3Q8IVW4 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CDKL3Q8IVW4 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.79□□□□□ -1.48
CDKL3Q8IVW4 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
CDKL3Q8IVW4 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
CDKL3Q8IVW4 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CDKL3Q8IVW4 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
CDKL3Q8IVW4 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.78□□□□□ -1.48
CDKL3Q8IVW4 PROS2P-201ENST00000474651 1951 ntBASIC5.78□□□□□ -1.48
CDKL3Q8IVW4 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
CDKL3Q8IVW4 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.78□□□□□ -1.48
CDKL3Q8IVW4 AC097063.1-201ENST00000426714 1797 ntBASIC5.78□□□□□ -1.48
CDKL3Q8IVW4 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
CDKL3Q8IVW4 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.78□□□□□ -1.48
CDKL3Q8IVW4 RN7SKP145-201ENST00000363291 303 ntBASIC5.78□□□□□ -1.48
CDKL3Q8IVW4 RNA5SP433-201ENST00000364491 114 ntBASIC5.78□□□□□ -1.48
CDKL3Q8IVW4 SNORA70.6-201ENST00000383934 134 ntBASIC5.78□□□□□ -1.48
CDKL3Q8IVW4 U3.28-201ENST00000391249 210 ntBASIC5.78□□□□□ -1.48
CDKL3Q8IVW4 OR7E101P-201ENST00000400428 513 ntBASIC5.78□□□□□ -1.48
CDKL3Q8IVW4 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.78□□□□□ -1.48
CDKL3Q8IVW4 NPM1P18-201ENST00000434232 732 ntBASIC5.78□□□□□ -1.48
CDKL3Q8IVW4 MTND2P40-201ENST00000436718 841 ntBASIC5.78□□□□□ -1.48
CDKL3Q8IVW4 AC110602.1-201ENST00000437414 318 ntBASIC5.78□□□□□ -1.48
CDKL3Q8IVW4 AL512637.1-201ENST00000439523 1231 ntBASIC5.78□□□□□ -1.48
CDKL3Q8IVW4 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC5.78□□□□□ -1.48
CDKL3Q8IVW4 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.78□□□□□ -1.48
CDKL3Q8IVW4 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC5.78□□□□□ -1.48
CDKL3Q8IVW4 AC083899.1-201ENST00000454465 3819 ntBASIC5.78□□□□□ -1.48
CDKL3Q8IVW4 PSAT1P4-201ENST00000466500 526 ntBASIC5.78□□□□□ -1.48
CDKL3Q8IVW4 RN7SL188P-201ENST00000469842 285 ntBASIC5.78□□□□□ -1.48
CDKL3Q8IVW4 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC5.78□□□□□ -1.48
CDKL3Q8IVW4 AC093815.1-201ENST00000508637 280 ntBASIC5.78□□□□□ -1.48
CDKL3Q8IVW4 SNORA70.20-201ENST00000516848 126 ntBASIC5.78□□□□□ -1.48
CDKL3Q8IVW4 IGLV3-24-201ENST00000517477 197 ntBASIC5.78□□□□□ -1.48
CDKL3Q8IVW4 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC5.78□□□□□ -1.48
CDKL3Q8IVW4 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.78□□□□□ -1.48
CDKL3Q8IVW4 AC092121.1-201ENST00000569452 202 ntBASIC5.78□□□□□ -1.48
CDKL3Q8IVW4 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.78□□□□□ -1.48
CDKL3Q8IVW4 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.78□□□□□ -1.48
CDKL3Q8IVW4 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.78□□□□□ -1.48
CDKL3Q8IVW4 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC5.78□□□□□ -1.48
CDKL3Q8IVW4 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CDKL3Q8IVW4 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CDKL3Q8IVW4 AC063977.5-201ENST00000601044 974 ntBASIC5.78□□□□□ -1.48
CDKL3Q8IVW4 AC007938.2-201ENST00000604666 2634 ntBASIC5.78□□□□□ -1.48
CDKL3Q8IVW4 AL139124.1-201ENST00000609123 421 ntBASIC5.78□□□□□ -1.48
CDKL3Q8IVW4 RNA5SP439-201ENST00000617595 124 ntBASIC5.78□□□□□ -1.48
CDKL3Q8IVW4 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.78□□□□□ -1.48
CDKL3Q8IVW4 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.78□□□□□ -1.48
CDKL3Q8IVW4 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.78□□□□□ -1.48
CDKL3Q8IVW4 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CDKL3Q8IVW4 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
CDKL3Q8IVW4 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.78□□□□□ -1.48
CDKL3Q8IVW4 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CDKL3Q8IVW4 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CDKL3Q8IVW4 NEPNP-201ENST00000404786 1371 ntBASIC5.78□□□□□ -1.48
CDKL3Q8IVW4 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.78□□□□□ -1.48
CDKL3Q8IVW4 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.78□□□□□ -1.48
CDKL3Q8IVW4 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.78□□□□□ -1.48
CDKL3Q8IVW4 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.77□□□□□ -1.49
CDKL3Q8IVW4 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CDKL3Q8IVW4 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.77□□□□□ -1.49
CDKL3Q8IVW4 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
CDKL3Q8IVW4 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CDKL3Q8IVW4 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
CDKL3Q8IVW4 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
CDKL3Q8IVW4 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.77□□□□□ -1.49
CDKL3Q8IVW4 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CDKL3Q8IVW4 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms