Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 FAM72A-208ENST00000607379 1139 ntBASIC6.86□□□□□ -1.31
CTR9Q6PD62 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC6.86□□□□□ -1.31
CTR9Q6PD62 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.86□□□□□ -1.31
CTR9Q6PD62 AC000095.2-202ENST00000637415 154 ntBASIC6.86□□□□□ -1.31
CTR9Q6PD62 MIR4302-201ENST00000638058 60 ntBASIC6.86□□□□□ -1.31
CTR9Q6PD62 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC6.86□□□□□ -1.31
CTR9Q6PD62 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CTR9Q6PD62 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC6.86□□□□□ -1.31
CTR9Q6PD62 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC6.86□□□□□ -1.31
CTR9Q6PD62 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
CTR9Q6PD62 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC6.86□□□□□ -1.31
CTR9Q6PD62 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
CTR9Q6PD62 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.85□□□□□ -1.31
CTR9Q6PD62 AP004607.3-201ENST00000530354 3915 ntBASIC6.85□□□□□ -1.31
CTR9Q6PD62 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
CTR9Q6PD62 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
CTR9Q6PD62 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
CTR9Q6PD62 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC6.85□□□□□ -1.31
CTR9Q6PD62 ZNF101P1-201ENST00000435701 1720 ntBASIC6.85□□□□□ -1.31
CTR9Q6PD62 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
CTR9Q6PD62 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CTR9Q6PD62 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC6.85□□□□□ -1.31
CTR9Q6PD62 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CTR9Q6PD62 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
CTR9Q6PD62 RNA5SP46-201ENST00000362370 120 ntBASIC6.85□□□□□ -1.31
CTR9Q6PD62 AC019205.1-201ENST00000421830 730 ntBASIC6.85□□□□□ -1.31
CTR9Q6PD62 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC6.85□□□□□ -1.31
CTR9Q6PD62 RPS3AP38-201ENST00000435889 763 ntBASIC6.85□□□□□ -1.31
CTR9Q6PD62 YWHAEP1-201ENST00000453697 763 ntBASIC6.85□□□□□ -1.31
CTR9Q6PD62 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC6.85□□□□□ -1.31
CTR9Q6PD62 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.85□□□□□ -1.31
CTR9Q6PD62 AC073610.1-201ENST00000489971 396 ntBASIC6.85□□□□□ -1.31
CTR9Q6PD62 AC138866.2-201ENST00000508650 584 ntBASIC6.85□□□□□ -1.31
CTR9Q6PD62 AC106872.4-201ENST00000510050 523 ntBASIC6.85□□□□□ -1.31
CTR9Q6PD62 AC074087.1-201ENST00000512059 724 ntBASIC6.85□□□□□ -1.31
CTR9Q6PD62 RNU6-615P-201ENST00000516065 106 ntBASIC6.85□□□□□ -1.31
CTR9Q6PD62 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC6.85□□□□□ -1.31
CTR9Q6PD62 AC078899.1-201ENST00000521432 1185 ntBASIC6.85□□□□□ -1.31
CTR9Q6PD62 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC6.85□□□□□ -1.31
CTR9Q6PD62 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC6.85□□□□□ -1.31
CTR9Q6PD62 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC6.85□□□□□ -1.31
CTR9Q6PD62 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CTR9Q6PD62 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC6.85□□□□□ -1.31
CTR9Q6PD62 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC6.85□□□□□ -1.31
CTR9Q6PD62 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CTR9Q6PD62 AC006484.1-201ENST00000435086 1884 ntBASIC6.85□□□□□ -1.31
CTR9Q6PD62 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CTR9Q6PD62 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC6.85□□□□□ -1.31
CTR9Q6PD62 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
CTR9Q6PD62 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CTR9Q6PD62 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CTR9Q6PD62 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC6.84□□□□□ -1.31
CTR9Q6PD62 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
CTR9Q6PD62 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC6.84□□□□□ -1.31
CTR9Q6PD62 AC117409.1-201ENST00000470499 1310 ntBASIC6.84□□□□□ -1.31
CTR9Q6PD62 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.84□□□□□ -1.31
CTR9Q6PD62 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
CTR9Q6PD62 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CTR9Q6PD62 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CTR9Q6PD62 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
CTR9Q6PD62 SNORD1C-201ENST00000363315 78 ntBASIC6.84□□□□□ -1.31
CTR9Q6PD62 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.31
CTR9Q6PD62 BMS1P17-202ENST00000416720 316 ntBASIC6.84□□□□□ -1.31
CTR9Q6PD62 NIFKP3-201ENST00000417799 865 ntBASIC6.84□□□□□ -1.31
CTR9Q6PD62 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC6.84□□□□□ -1.31
CTR9Q6PD62 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CTR9Q6PD62 RNU1-88P-201ENST00000459274 128 ntBASIC6.84□□□□□ -1.31
CTR9Q6PD62 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CTR9Q6PD62 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC6.84□□□□□ -1.31
CTR9Q6PD62 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC6.84□□□□□ -1.31
CTR9Q6PD62 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC6.84□□□□□ -1.31
CTR9Q6PD62 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC6.84□□□□□ -1.31
CTR9Q6PD62 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.84□□□□□ -1.31
CTR9Q6PD62 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.84□□□□□ -1.31
CTR9Q6PD62 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC6.84□□□□□ -1.31
CTR9Q6PD62 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
CTR9Q6PD62 SRRM1P3-201ENST00000426911 2678 ntBASIC6.83□□□□□ -1.32
CTR9Q6PD62 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
CTR9Q6PD62 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CTR9Q6PD62 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CTR9Q6PD62 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
CTR9Q6PD62 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CTR9Q6PD62 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC6.83□□□□□ -1.32
CTR9Q6PD62 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC6.83□□□□□ -1.32
CTR9Q6PD62 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.83□□□□□ -1.32
CTR9Q6PD62 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
CTR9Q6PD62 AL162456.1-201ENST00000634535 2006 ntBASIC6.83□□□□□ -1.32
CTR9Q6PD62 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
CTR9Q6PD62 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
CTR9Q6PD62 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC6.83□□□□□ -1.32
CTR9Q6PD62 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC6.83□□□□□ -1.32
CTR9Q6PD62 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.83□□□□□ -1.32
CTR9Q6PD62 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
CTR9Q6PD62 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CTR9Q6PD62 AL596448.1-201ENST00000415024 392 ntBASIC6.83□□□□□ -1.32
CTR9Q6PD62 EEF1A1P29-201ENST00000416082 1096 ntBASIC6.83□□□□□ -1.32
CTR9Q6PD62 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC6.83□□□□□ -1.32
CTR9Q6PD62 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC6.83□□□□□ -1.32
CTR9Q6PD62 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC6.83□□□□□ -1.32
CTR9Q6PD62 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC6.83□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms