Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 AC006499.5-201ENST00000505037 514 ntBASIC6.99□□□□□ -1.29
PCDH1Q08174 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
PCDH1Q08174 ROPN1B-207ENST00000511082 782 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
PCDH1Q08174 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC6.99□□□□□ -1.29
PCDH1Q08174 AC005832.3-201ENST00000537929 631 ntBASIC6.99□□□□□ -1.29
PCDH1Q08174 RNASE11-206ENST00000553849 1101 ntAPPRIS P2 TSL 1 (best) BASIC6.99□□□□□ -1.29
PCDH1Q08174 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
PCDH1Q08174 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC6.99□□□□□ -1.29
PCDH1Q08174 SNORA59B-202ENST00000578183 701 ntBASIC6.99□□□□□ -1.29
PCDH1Q08174 BNIP3P33-201ENST00000598912 569 ntBASIC6.99□□□□□ -1.29
PCDH1Q08174 AL049840.5-201ENST00000602827 552 ntBASIC6.99□□□□□ -1.29
PCDH1Q08174 AC023158.2-201ENST00000614876 543 ntBASIC6.99□□□□□ -1.29
PCDH1Q08174 AC072046.2-201ENST00000618366 268 ntBASIC6.99□□□□□ -1.29
PCDH1Q08174 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC6.99□□□□□ -1.29
PCDH1Q08174 LINC01002-204ENST00000631644 473 ntTSL 5 BASIC6.99□□□□□ -1.29
PCDH1Q08174 AL590396.3-201ENST00000636334 300 ntBASIC6.99□□□□□ -1.29
PCDH1Q08174 AC073869.7-201ENST00000640874 297 ntBASIC6.99□□□□□ -1.29
PCDH1Q08174 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
PCDH1Q08174 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
PCDH1Q08174 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC6.99□□□□□ -1.29
PCDH1Q08174 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC6.99□□□□□ -1.29
PCDH1Q08174 KCNMB3P1-202ENST00000493696 3389 ntBASIC6.99□□□□□ -1.29
PCDH1Q08174 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC6.99□□□□□ -1.29
PCDH1Q08174 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
PCDH1Q08174 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC6.99□□□□□ -1.29
PCDH1Q08174 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
PCDH1Q08174 IL5RA-204ENST00000418488 5521 ntTSL 5 BASIC6.99□□□□□ -1.29
PCDH1Q08174 GDNF-202ENST00000344622 3655 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
PCDH1Q08174 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
PCDH1Q08174 OR51M1-203ENST00000642046 4092 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
PCDH1Q08174 CD163-209ENST00000541972 3590 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
PCDH1Q08174 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC6.99□□□□□ -1.29
PCDH1Q08174 ZC3H11B-201ENST00000367211 2994 ntAPPRIS P5 TSL 5 BASIC6.99□□□□□ -1.29
PCDH1Q08174 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
PCDH1Q08174 OLR1-201ENST00000309539 2462 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
PCDH1Q08174 TCP11X2-202ENST00000453326 1747 ntAPPRIS P1 TSL 2 BASIC6.98□□□□□ -1.29
PCDH1Q08174 TCP11X1-201ENST00000597070 1747 ntTSL 2 BASIC6.98□□□□□ -1.29
PCDH1Q08174 CLUL1-201ENST00000338387 1897 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
PCDH1Q08174 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC6.98□□□□□ -1.29
PCDH1Q08174 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC6.98□□□□□ -1.29
PCDH1Q08174 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC6.98□□□□□ -1.29
PCDH1Q08174 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
PCDH1Q08174 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
PCDH1Q08174 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
PCDH1Q08174 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
PCDH1Q08174 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
PCDH1Q08174 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
PCDH1Q08174 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
PCDH1Q08174 AL157713.1-201ENST00000379752 1531 ntBASIC6.98□□□□□ -1.29
PCDH1Q08174 IFNW1-201ENST00000380229 1932 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
PCDH1Q08174 LARP1B-203ENST00000432347 2707 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
PCDH1Q08174 AC096564.2-201ENST00000512428 3147 ntTSL 5 BASIC6.98□□□□□ -1.29
PCDH1Q08174 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
PCDH1Q08174 GALNTL5-206ENST00000431418 1678 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
PCDH1Q08174 METTL21EP-201ENST00000298105 713 ntBASIC6.98□□□□□ -1.29
PCDH1Q08174 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
PCDH1Q08174 OR51M1-201ENST00000328611 1058 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
PCDH1Q08174 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
PCDH1Q08174 RN7SKP107-201ENST00000364157 290 ntBASIC6.98□□□□□ -1.29
PCDH1Q08174 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC6.98□□□□□ -1.29
PCDH1Q08174 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC6.98□□□□□ -1.29
PCDH1Q08174 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
PCDH1Q08174 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC6.98□□□□□ -1.29
PCDH1Q08174 VTA1P1-201ENST00000414044 866 ntBASIC6.98□□□□□ -1.29
PCDH1Q08174 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC6.98□□□□□ -1.29
PCDH1Q08174 PPIAP30-201ENST00000415473 519 ntBASIC6.98□□□□□ -1.29
PCDH1Q08174 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC6.98□□□□□ -1.29
PCDH1Q08174 AL050320.1-201ENST00000420044 446 ntTSL 2 BASIC6.98□□□□□ -1.29
PCDH1Q08174 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC6.98□□□□□ -1.29
PCDH1Q08174 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC6.98□□□□□ -1.29
PCDH1Q08174 AC079781.1-201ENST00000441505 394 ntBASIC6.98□□□□□ -1.29
PCDH1Q08174 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC6.98□□□□□ -1.29
PCDH1Q08174 RN7SL325P-201ENST00000460434 283 ntBASIC6.98□□□□□ -1.29
PCDH1Q08174 AC115223.1-201ENST00000466377 870 ntBASIC6.98□□□□□ -1.29
PCDH1Q08174 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC6.98□□□□□ -1.29
PCDH1Q08174 RN7SL563P-201ENST00000481233 298 ntBASIC6.98□□□□□ -1.29
PCDH1Q08174 RPL34P33-201ENST00000486062 334 ntBASIC6.98□□□□□ -1.29
PCDH1Q08174 RN7SL797P-201ENST00000486314 297 ntBASIC6.98□□□□□ -1.29
PCDH1Q08174 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC6.98□□□□□ -1.29
PCDH1Q08174 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC6.98□□□□□ -1.29
PCDH1Q08174 AC008967.1-201ENST00000504843 163 ntBASIC6.98□□□□□ -1.29
PCDH1Q08174 AC091874.2-201ENST00000505889 720 ntBASIC6.98□□□□□ -1.29
PCDH1Q08174 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC6.98□□□□□ -1.29
PCDH1Q08174 ATP1B1P1-201ENST00000509767 915 ntBASIC6.98□□□□□ -1.29
PCDH1Q08174 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC6.98□□□□□ -1.29
PCDH1Q08174 AC103974.1-201ENST00000527285 874 ntTSL 3 BASIC6.98□□□□□ -1.29
PCDH1Q08174 SLC25A51P2-201ENST00000535708 889 ntBASIC6.98□□□□□ -1.29
PCDH1Q08174 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC6.98□□□□□ -1.29
PCDH1Q08174 HIGD1AP9-201ENST00000550710 279 ntBASIC6.98□□□□□ -1.29
PCDH1Q08174 NTS-203ENST00000551529 801 ntTSL 3 BASIC6.98□□□□□ -1.29
PCDH1Q08174 AC010333.1-201ENST00000563116 563 ntTSL 4 BASIC6.98□□□□□ -1.29
PCDH1Q08174 CMC2-213ENST00000565914 528 ntAPPRIS P1 TSL 3 BASIC6.98□□□□□ -1.29
PCDH1Q08174 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
PCDH1Q08174 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC6.98□□□□□ -1.29
PCDH1Q08174 AC008385.1-201ENST00000604421 355 ntBASIC6.98□□□□□ -1.29
PCDH1Q08174 AL109936.2-201ENST00000605350 650 ntBASIC6.98□□□□□ -1.29
PCDH1Q08174 AP001330.5-201ENST00000607176 411 ntBASIC6.98□□□□□ -1.29
PCDH1Q08174 HOTTIP_2.1-201ENST00000616633 376 ntBASIC6.98□□□□□ -1.29
PCDH1Q08174 AC244196.5-201ENST00000617347 406 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
PCDH1Q08174 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC6.98□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms