Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC6.55□□□□□ -1.36
CCNA1P78396 AC126615.2-201ENST00000553003 515 ntBASIC6.55□□□□□ -1.36
CCNA1P78396 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
CCNA1P78396 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC6.55□□□□□ -1.36
CCNA1P78396 AC007346.2-201ENST00000564816 892 ntBASIC6.55□□□□□ -1.36
CCNA1P78396 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC6.55□□□□□ -1.36
CCNA1P78396 RPSAP73-201ENST00000614820 330 ntBASIC6.55□□□□□ -1.36
CCNA1P78396 AC009120.7-201ENST00000623452 780 ntBASIC6.55□□□□□ -1.36
CCNA1P78396 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.55□□□□□ -1.36
CCNA1P78396 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.54□□□□□ -1.36
CCNA1P78396 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCNA1P78396 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCNA1P78396 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCNA1P78396 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCNA1P78396 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC6.54□□□□□ -1.36
CCNA1P78396 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.54□□□□□ -1.36
CCNA1P78396 RNA5SP507-201ENST00000363603 121 ntBASIC6.54□□□□□ -1.36
CCNA1P78396 RNA5SP30-201ENST00000365552 115 ntBASIC6.54□□□□□ -1.36
CCNA1P78396 TRAV35-201ENST00000390462 330 ntBASIC6.54□□□□□ -1.36
CCNA1P78396 NACAP7-201ENST00000407371 609 ntBASIC6.54□□□□□ -1.36
CCNA1P78396 RNU6ATAC18P-201ENST00000408413 101 ntBASIC6.54□□□□□ -1.36
CCNA1P78396 NENFP1-201ENST00000419476 466 ntBASIC6.54□□□□□ -1.36
CCNA1P78396 RPL7L1P9-201ENST00000431298 745 ntBASIC6.54□□□□□ -1.36
CCNA1P78396 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC6.54□□□□□ -1.36
CCNA1P78396 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC6.54□□□□□ -1.36
CCNA1P78396 AP000547.1-201ENST00000454360 617 ntBASIC6.54□□□□□ -1.36
CCNA1P78396 AC005532.2-201ENST00000467154 373 ntBASIC6.54□□□□□ -1.36
CCNA1P78396 AC079841.1-201ENST00000481228 950 ntBASIC6.54□□□□□ -1.36
CCNA1P78396 AC093270.2-201ENST00000486157 792 ntBASIC6.54□□□□□ -1.36
CCNA1P78396 HMGN2P47-201ENST00000559378 272 ntBASIC6.54□□□□□ -1.36
CCNA1P78396 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC6.54□□□□□ -1.36
CCNA1P78396 MIR4700-201ENST00000578311 74 ntBASIC6.54□□□□□ -1.36
CCNA1P78396 AC241377.1-201ENST00000619797 406 ntBASIC6.54□□□□□ -1.36
CCNA1P78396 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
CCNA1P78396 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCNA1P78396 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.54□□□□□ -1.36
CCNA1P78396 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CCNA1P78396 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.54□□□□□ -1.36
CCNA1P78396 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC6.54□□□□□ -1.36
CCNA1P78396 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CCNA1P78396 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC6.54□□□□□ -1.36
CCNA1P78396 OR5AQ1P-202ENST00000641257 1534 ntBASIC6.54□□□□□ -1.36
CCNA1P78396 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCNA1P78396 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCNA1P78396 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCNA1P78396 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCNA1P78396 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCNA1P78396 AL353763.1-201ENST00000624467 1628 ntBASIC6.54□□□□□ -1.36
CCNA1P78396 AP004607.3-201ENST00000530354 3915 ntBASIC6.54□□□□□ -1.36
CCNA1P78396 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCNA1P78396 AC087516.1-201ENST00000561236 2428 ntBASIC6.54□□□□□ -1.36
CCNA1P78396 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.54□□□□□ -1.36
CCNA1P78396 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CCNA1P78396 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC6.53□□□□□ -1.36
CCNA1P78396 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CCNA1P78396 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
CCNA1P78396 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CCNA1P78396 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC6.53□□□□□ -1.36
CCNA1P78396 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.53□□□□□ -1.36
CCNA1P78396 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CCNA1P78396 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CCNA1P78396 RPL35AP24-201ENST00000413846 330 ntBASIC6.53□□□□□ -1.36
CCNA1P78396 RPL23AP27-201ENST00000415161 451 ntBASIC6.53□□□□□ -1.36
CCNA1P78396 RPS17P17-201ENST00000419392 409 ntBASIC6.53□□□□□ -1.36
CCNA1P78396 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC6.53□□□□□ -1.36
CCNA1P78396 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC6.53□□□□□ -1.36
CCNA1P78396 EEF1B2P5-201ENST00000444820 548 ntBASIC6.53□□□□□ -1.36
CCNA1P78396 RPS23P2-201ENST00000463671 415 ntBASIC6.53□□□□□ -1.36
CCNA1P78396 RPS21P4-201ENST00000487122 248 ntBASIC6.53□□□□□ -1.36
CCNA1P78396 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC6.53□□□□□ -1.36
CCNA1P78396 MAL2-207ENST00000522828 603 ntTSL 3 BASIC6.53□□□□□ -1.36
CCNA1P78396 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC6.53□□□□□ -1.36
CCNA1P78396 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC6.53□□□□□ -1.36
CCNA1P78396 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CCNA1P78396 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC6.53□□□□□ -1.36
CCNA1P78396 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC6.53□□□□□ -1.36
CCNA1P78396 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC6.53□□□□□ -1.36
CCNA1P78396 AL355974.3-201ENST00000617383 467 ntBASIC6.53□□□□□ -1.36
CCNA1P78396 AC136428.4-201ENST00000634254 1155 ntBASIC6.53□□□□□ -1.36
CCNA1P78396 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
CCNA1P78396 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC6.53□□□□□ -1.36
CCNA1P78396 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CCNA1P78396 AC007938.2-201ENST00000604666 2634 ntBASIC6.53□□□□□ -1.36
CCNA1P78396 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CCNA1P78396 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6.53□□□□□ -1.36
CCNA1P78396 MFSD8-219ENST00000641228 2559 ntBASIC6.53□□□□□ -1.36
CCNA1P78396 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.52□□□□□ -1.36
CCNA1P78396 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC6.52□□□□□ -1.36
CCNA1P78396 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC6.52□□□□□ -1.36
CCNA1P78396 FBXL21-201ENST00000297158 1305 ntBASIC6.52□□□□□ -1.37
CCNA1P78396 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
CCNA1P78396 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CCNA1P78396 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC6.52□□□□□ -1.37
CCNA1P78396 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CCNA1P78396 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CCNA1P78396 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC6.52□□□□□ -1.37
CCNA1P78396 RNA5SP183-201ENST00000362452 119 ntBASIC6.52□□□□□ -1.37
CCNA1P78396 AL645927.1-201ENST00000396783 406 ntBASIC6.52□□□□□ -1.37
CCNA1P78396 SEPT7P2-202ENST00000398921 823 ntBASIC6.52□□□□□ -1.37
CCNA1P78396 AC116036.1-201ENST00000412199 367 ntBASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms