Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 AC096775.1-201ENST00000437724 448 ntBASIC4.76□□□□□ -1.65
LMO4P61968 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC4.76□□□□□ -1.65
LMO4P61968 AC007386.1-201ENST00000455212 582 ntBASIC4.76□□□□□ -1.65
LMO4P61968 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
LMO4P61968 OR7L1P-201ENST00000456181 380 ntBASIC4.76□□□□□ -1.65
LMO4P61968 AC110749.1-201ENST00000462007 357 ntBASIC4.76□□□□□ -1.65
LMO4P61968 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC4.76□□□□□ -1.65
LMO4P61968 SIAH1P1-201ENST00000479411 923 ntBASIC4.76□□□□□ -1.65
LMO4P61968 RN7SL184P-201ENST00000488308 297 ntBASIC4.76□□□□□ -1.65
LMO4P61968 AC073610.1-201ENST00000489971 396 ntBASIC4.76□□□□□ -1.65
LMO4P61968 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
LMO4P61968 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC4.76□□□□□ -1.65
LMO4P61968 AC112206.4-201ENST00000515142 405 ntBASIC4.76□□□□□ -1.65
LMO4P61968 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC4.76□□□□□ -1.65
LMO4P61968 NRBF2P4-201ENST00000520874 850 ntBASIC4.76□□□□□ -1.65
LMO4P61968 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC4.76□□□□□ -1.65
LMO4P61968 AC130364.2-201ENST00000528639 604 ntBASIC4.76□□□□□ -1.65
LMO4P61968 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC4.76□□□□□ -1.65
LMO4P61968 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC4.76□□□□□ -1.65
LMO4P61968 EIF1AXP2-201ENST00000555940 413 ntBASIC4.76□□□□□ -1.65
LMO4P61968 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC4.76□□□□□ -1.65
LMO4P61968 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC4.76□□□□□ -1.65
LMO4P61968 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC4.76□□□□□ -1.65
LMO4P61968 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC4.76□□□□□ -1.65
LMO4P61968 AC016542.1-201ENST00000608259 493 ntBASIC4.76□□□□□ -1.65
LMO4P61968 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LMO4P61968 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LMO4P61968 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LMO4P61968 DMD-222ENST00000474231 5209 ntTSL 5 BASIC4.76□□□□□ -1.65
LMO4P61968 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
LMO4P61968 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LMO4P61968 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LMO4P61968 AC137056.2-201ENST00000624055 1958 ntBASIC4.76□□□□□ -1.65
LMO4P61968 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LMO4P61968 AP004607.3-201ENST00000530354 3915 ntBASIC4.76□□□□□ -1.65
LMO4P61968 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LMO4P61968 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC4.75□□□□□ -1.65
LMO4P61968 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
LMO4P61968 FBXL21-201ENST00000297158 1305 ntBASIC4.75□□□□□ -1.65
LMO4P61968 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
LMO4P61968 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
LMO4P61968 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC4.75□□□□□ -1.65
LMO4P61968 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC4.75□□□□□ -1.65
LMO4P61968 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
LMO4P61968 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
LMO4P61968 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
LMO4P61968 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
LMO4P61968 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
LMO4P61968 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC4.75□□□□□ -1.65
LMO4P61968 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
LMO4P61968 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC4.75□□□□□ -1.65
LMO4P61968 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC4.75□□□□□ -1.65
LMO4P61968 NACAP7-201ENST00000407371 609 ntBASIC4.75□□□□□ -1.65
LMO4P61968 SNORA11B-201ENST00000408175 129 ntBASIC4.75□□□□□ -1.65
LMO4P61968 NPM1P4-201ENST00000414095 812 ntBASIC4.75□□□□□ -1.65
LMO4P61968 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC4.75□□□□□ -1.65
LMO4P61968 EIF4A1P7-201ENST00000421800 1220 ntBASIC4.75□□□□□ -1.65
LMO4P61968 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC4.75□□□□□ -1.65
LMO4P61968 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
LMO4P61968 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
LMO4P61968 AL390119.1-201ENST00000440329 312 ntBASIC4.75□□□□□ -1.65
LMO4P61968 CYCSP51-201ENST00000443545 318 ntBASIC4.75□□□□□ -1.65
LMO4P61968 SPRYD7P1-201ENST00000443861 570 ntBASIC4.75□□□□□ -1.65
LMO4P61968 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC4.75□□□□□ -1.65
LMO4P61968 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC4.75□□□□□ -1.65
LMO4P61968 TPRKBP1-201ENST00000456243 481 ntBASIC4.75□□□□□ -1.65
LMO4P61968 LDHBP2-201ENST00000456969 1005 ntBASIC4.75□□□□□ -1.65
LMO4P61968 AC004129.2-201ENST00000457229 287 ntBASIC4.75□□□□□ -1.65
LMO4P61968 AL445687.2-201ENST00000458156 728 ntBASIC4.75□□□□□ -1.65
LMO4P61968 AL355032.1-201ENST00000472981 438 ntBASIC4.75□□□□□ -1.65
LMO4P61968 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC4.75□□□□□ -1.65
LMO4P61968 GOLGA5P1-201ENST00000507317 980 ntBASIC4.75□□□□□ -1.65
LMO4P61968 AC021146.10-201ENST00000515628 706 ntBASIC4.75□□□□□ -1.65
LMO4P61968 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC4.75□□□□□ -1.65
LMO4P61968 OR4A46P-201ENST00000527255 933 ntBASIC4.75□□□□□ -1.65
LMO4P61968 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
LMO4P61968 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC4.75□□□□□ -1.65
LMO4P61968 AC126615.2-201ENST00000553003 515 ntBASIC4.75□□□□□ -1.65
LMO4P61968 NPM1P5-201ENST00000557228 838 ntBASIC4.75□□□□□ -1.65
LMO4P61968 AC015720.2-201ENST00000567709 334 ntBASIC4.75□□□□□ -1.65
LMO4P61968 AC023389.2-201ENST00000580031 955 ntBASIC4.75□□□□□ -1.65
LMO4P61968 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC4.75□□□□□ -1.65
LMO4P61968 AL035661.1-201ENST00000620459 1144 ntBASIC4.75□□□□□ -1.65
LMO4P61968 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC4.75□□□□□ -1.65
LMO4P61968 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
LMO4P61968 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
LMO4P61968 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC4.75□□□□□ -1.65
LMO4P61968 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
LMO4P61968 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
LMO4P61968 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
LMO4P61968 AFP-201ENST00000226359 1914 ntTSL 5 BASIC4.75□□□□□ -1.65
LMO4P61968 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC4.75□□□□□ -1.65
LMO4P61968 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
LMO4P61968 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
LMO4P61968 MTCO1P22-201ENST00000604619 1360 ntBASIC4.75□□□□□ -1.65
LMO4P61968 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
LMO4P61968 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC4.75□□□□□ -1.65
LMO4P61968 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
LMO4P61968 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
LMO4P61968 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms