Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 AL080312.1-201ENST00000256654 824 ntBASIC4.05□□□□□ -1.76
CKS1BP61024 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
CKS1BP61024 TINAG-202ENST00000370864 692 ntTSL 2 BASIC4.05□□□□□ -1.76
CKS1BP61024 SNORA70.6-201ENST00000383934 134 ntBASIC4.05□□□□□ -1.76
CKS1BP61024 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
CKS1BP61024 RNU6-1320P-201ENST00000390838 107 ntBASIC4.05□□□□□ -1.76
CKS1BP61024 RNU6-1269P-201ENST00000391139 107 ntBASIC4.05□□□□□ -1.76
CKS1BP61024 AL078599.1-201ENST00000402075 293 ntBASIC4.05□□□□□ -1.76
CKS1BP61024 AL139100.1-201ENST00000408001 498 ntBASIC4.05□□□□□ -1.76
CKS1BP61024 MIR1271-201ENST00000408537 86 ntBASIC4.05□□□□□ -1.76
CKS1BP61024 MYL6P5-201ENST00000412707 459 ntBASIC4.05□□□□□ -1.76
CKS1BP61024 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC4.05□□□□□ -1.76
CKS1BP61024 GAPDHP49-201ENST00000421421 961 ntBASIC4.05□□□□□ -1.76
CKS1BP61024 CLCN3P1-201ENST00000423965 1017 ntBASIC4.05□□□□□ -1.76
CKS1BP61024 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC4.05□□□□□ -1.76
CKS1BP61024 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC4.05□□□□□ -1.76
CKS1BP61024 AL389925.1-201ENST00000432257 728 ntBASIC4.05□□□□□ -1.76
CKS1BP61024 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC4.05□□□□□ -1.76
CKS1BP61024 OR3D1P-201ENST00000438288 955 ntBASIC4.05□□□□□ -1.76
CKS1BP61024 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC4.05□□□□□ -1.76
CKS1BP61024 AC009244.1-201ENST00000450566 258 ntBASIC4.05□□□□□ -1.76
CKS1BP61024 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC4.05□□□□□ -1.76
CKS1BP61024 RNU6-599P-201ENST00000459383 107 ntBASIC4.05□□□□□ -1.76
CKS1BP61024 RNU6-1193P-201ENST00000459461 107 ntBASIC4.05□□□□□ -1.76
CKS1BP61024 PFN2-209ENST00000481275 560 ntTSL 4 BASIC4.05□□□□□ -1.76
CKS1BP61024 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.05□□□□□ -1.76
CKS1BP61024 AC083795.1-201ENST00000491760 320 ntBASIC4.05□□□□□ -1.76
CKS1BP61024 ARL4AP1-201ENST00000503220 705 ntBASIC4.05□□□□□ -1.76
CKS1BP61024 AC018645.1-201ENST00000505003 109 ntBASIC4.05□□□□□ -1.76
CKS1BP61024 SNX18P24-201ENST00000505249 671 ntBASIC4.05□□□□□ -1.76
CKS1BP61024 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC4.05□□□□□ -1.76
CKS1BP61024 KHDC1P1-201ENST00000511053 508 ntBASIC4.05□□□□□ -1.76
CKS1BP61024 RN7SKP288-201ENST00000516227 268 ntBASIC4.05□□□□□ -1.76
CKS1BP61024 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC4.05□□□□□ -1.76
CKS1BP61024 AC007991.4-201ENST00000522970 605 ntTSL 3 BASIC4.05□□□□□ -1.76
CKS1BP61024 AL133399.1-201ENST00000527476 298 ntBASIC4.05□□□□□ -1.76
CKS1BP61024 AP002004.1-206ENST00000532441 876 ntBASIC4.05□□□□□ -1.76
CKS1BP61024 AC103855.4-201ENST00000533158 265 ntBASIC4.05□□□□□ -1.76
CKS1BP61024 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC4.05□□□□□ -1.76
CKS1BP61024 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC4.05□□□□□ -1.76
CKS1BP61024 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC4.05□□□□□ -1.76
CKS1BP61024 AC037479.1-201ENST00000558361 625 ntBASIC4.05□□□□□ -1.76
CKS1BP61024 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC4.05□□□□□ -1.76
CKS1BP61024 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC4.05□□□□□ -1.76
CKS1BP61024 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC4.05□□□□□ -1.76
CKS1BP61024 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC4.05□□□□□ -1.76
CKS1BP61024 AC005323.1-203ENST00000585303 566 ntTSL 5 BASIC4.05□□□□□ -1.76
CKS1BP61024 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC4.05□□□□□ -1.76
CKS1BP61024 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC4.05□□□□□ -1.76
CKS1BP61024 AC023206.1-201ENST00000605824 298 ntBASIC4.05□□□□□ -1.76
CKS1BP61024 AC141002.1-201ENST00000607025 279 ntBASIC4.05□□□□□ -1.76
CKS1BP61024 RN7SL261P-201ENST00000613441 282 ntBASIC4.05□□□□□ -1.76
CKS1BP61024 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CKS1BP61024 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC4.05□□□□□ -1.76
CKS1BP61024 RNU6-368P-201ENST00000620928 107 ntBASIC4.05□□□□□ -1.76
CKS1BP61024 RNU6-538P-201ENST00000622329 107 ntBASIC4.05□□□□□ -1.76
CKS1BP61024 AC117503.3-201ENST00000623811 601 ntBASIC4.05□□□□□ -1.76
CKS1BP61024 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
CKS1BP61024 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
CKS1BP61024 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
CKS1BP61024 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
CKS1BP61024 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC4.05□□□□□ -1.76
CKS1BP61024 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CKS1BP61024 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC4.05□□□□□ -1.76
CKS1BP61024 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.05□□□□□ -1.76
CKS1BP61024 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CKS1BP61024 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC4.05□□□□□ -1.76
CKS1BP61024 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CKS1BP61024 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CKS1BP61024 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC4.04□□□□□ -1.76
CKS1BP61024 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CKS1BP61024 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
CKS1BP61024 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CKS1BP61024 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.04□□□□□ -1.76
CKS1BP61024 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC4.04□□□□□ -1.76
CKS1BP61024 OR7A2P-201ENST00000304105 930 ntBASIC4.04□□□□□ -1.76
CKS1BP61024 OR9K1P-201ENST00000326513 941 ntBASIC4.04□□□□□ -1.76
CKS1BP61024 OR10R3P-201ENST00000361688 942 ntBASIC4.04□□□□□ -1.76
CKS1BP61024 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
CKS1BP61024 GGA1-205ENST00000405147 575 ntTSL 4 BASIC4.04□□□□□ -1.76
CKS1BP61024 MRPL32P1-201ENST00000406301 247 ntBASIC4.04□□□□□ -1.76
CKS1BP61024 RNA5SP156-201ENST00000410250 110 ntBASIC4.04□□□□□ -1.76
CKS1BP61024 RN7SKP199-201ENST00000410325 305 ntBASIC4.04□□□□□ -1.76
CKS1BP61024 RN7SKP121-201ENST00000410842 305 ntBASIC4.04□□□□□ -1.76
CKS1BP61024 AL356968.2-201ENST00000412769 1257 ntBASIC4.04□□□□□ -1.76
CKS1BP61024 CYCSP10-201ENST00000417973 294 ntBASIC4.04□□□□□ -1.76
CKS1BP61024 ELOBP4-201ENST00000423418 296 ntBASIC4.04□□□□□ -1.76
CKS1BP61024 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC4.04□□□□□ -1.76
CKS1BP61024 AL138479.1-201ENST00000426913 484 ntBASIC4.04□□□□□ -1.76
CKS1BP61024 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC4.04□□□□□ -1.76
CKS1BP61024 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CKS1BP61024 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC4.04□□□□□ -1.76
CKS1BP61024 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC4.04□□□□□ -1.76
CKS1BP61024 SLC25A24P1-202ENST00000434803 1220 ntBASIC4.04□□□□□ -1.76
CKS1BP61024 GTF2IP14-201ENST00000441415 586 ntBASIC4.04□□□□□ -1.76
CKS1BP61024 GEMIN8P3-201ENST00000445417 720 ntBASIC4.04□□□□□ -1.76
CKS1BP61024 AF196972.1-201ENST00000445586 653 ntTSL 3 BASIC4.04□□□□□ -1.76
CKS1BP61024 AL929410.2-201ENST00000451170 189 ntBASIC4.04□□□□□ -1.76
CKS1BP61024 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC4.04□□□□□ -1.76
CKS1BP61024 RNU1-88P-201ENST00000459274 128 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms