Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 SAMM50P1-201ENST00000455403 1399 ntBASIC5.48□□□□□ -1.53
VSX2P58304 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.48□□□□□ -1.53
VSX2P58304 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
VSX2P58304 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
VSX2P58304 RN7SKP69-201ENST00000365390 305 ntBASIC5.48□□□□□ -1.53
VSX2P58304 RN7SKP81-201ENST00000365603 331 ntBASIC5.48□□□□□ -1.53
VSX2P58304 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
VSX2P58304 SEPT7P2-202ENST00000398921 823 ntBASIC5.48□□□□□ -1.53
VSX2P58304 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
VSX2P58304 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.48□□□□□ -1.53
VSX2P58304 AC017078.1-201ENST00000416146 368 ntBASIC5.48□□□□□ -1.53
VSX2P58304 NIFKP3-201ENST00000417799 865 ntBASIC5.48□□□□□ -1.53
VSX2P58304 AL662874.1-201ENST00000426065 230 ntBASIC5.48□□□□□ -1.53
VSX2P58304 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.48□□□□□ -1.53
VSX2P58304 RPL5P2-201ENST00000429598 854 ntBASIC5.48□□□□□ -1.53
VSX2P58304 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.48□□□□□ -1.53
VSX2P58304 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
VSX2P58304 FRG2FP-204ENST00000453982 852 ntBASIC5.48□□□□□ -1.53
VSX2P58304 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.48□□□□□ -1.53
VSX2P58304 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.48□□□□□ -1.53
VSX2P58304 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.48□□□□□ -1.53
VSX2P58304 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.48□□□□□ -1.53
VSX2P58304 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC5.48□□□□□ -1.53
VSX2P58304 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.48□□□□□ -1.53
VSX2P58304 RNU6-615P-201ENST00000516065 106 ntBASIC5.48□□□□□ -1.53
VSX2P58304 snoU109.5-201ENST00000516231 132 ntBASIC5.48□□□□□ -1.53
VSX2P58304 SNORA43.3-201ENST00000517240 103 ntBASIC5.48□□□□□ -1.53
VSX2P58304 GTF2IP11-201ENST00000526931 420 ntBASIC5.48□□□□□ -1.53
VSX2P58304 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC5.48□□□□□ -1.53
VSX2P58304 AC027544.3-201ENST00000535082 757 ntBASIC5.48□□□□□ -1.53
VSX2P58304 AL121594.2-201ENST00000541658 472 ntBASIC5.48□□□□□ -1.53
VSX2P58304 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.48□□□□□ -1.53
VSX2P58304 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.48□□□□□ -1.53
VSX2P58304 OOSP1P2-201ENST00000579644 351 ntBASIC5.48□□□□□ -1.53
VSX2P58304 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.48□□□□□ -1.53
VSX2P58304 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.48□□□□□ -1.53
VSX2P58304 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.48□□□□□ -1.53
VSX2P58304 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
VSX2P58304 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.48□□□□□ -1.53
VSX2P58304 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
VSX2P58304 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.48□□□□□ -1.53
VSX2P58304 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
VSX2P58304 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.48□□□□□ -1.53
VSX2P58304 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.48□□□□□ -1.53
VSX2P58304 MRE11P1-201ENST00000464884 2127 ntBASIC5.48□□□□□ -1.53
VSX2P58304 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
VSX2P58304 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.48□□□□□ -1.53
VSX2P58304 AC109446.4-201ENST00000623235 2755 ntBASIC5.48□□□□□ -1.53
VSX2P58304 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
VSX2P58304 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
VSX2P58304 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
VSX2P58304 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC5.48□□□□□ -1.53
VSX2P58304 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
VSX2P58304 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
VSX2P58304 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
VSX2P58304 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
VSX2P58304 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
VSX2P58304 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
VSX2P58304 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.47□□□□□ -1.53
VSX2P58304 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.47□□□□□ -1.53
VSX2P58304 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC5.47□□□□□ -1.53
VSX2P58304 AC087752.1-201ENST00000391360 558 ntBASIC5.47□□□□□ -1.53
VSX2P58304 RN7SKP286-201ENST00000410894 299 ntBASIC5.47□□□□□ -1.53
VSX2P58304 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.47□□□□□ -1.53
VSX2P58304 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.47□□□□□ -1.53
VSX2P58304 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.47□□□□□ -1.53
VSX2P58304 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.47□□□□□ -1.53
VSX2P58304 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC5.47□□□□□ -1.53
VSX2P58304 AC073410.1-201ENST00000435125 589 ntBASIC5.47□□□□□ -1.53
VSX2P58304 AC242426.1-201ENST00000435270 960 ntBASIC5.47□□□□□ -1.53
VSX2P58304 AL391987.1-201ENST00000441025 200 ntBASIC5.47□□□□□ -1.53
VSX2P58304 EEF1B2P6-201ENST00000445713 673 ntBASIC5.47□□□□□ -1.53
VSX2P58304 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.47□□□□□ -1.53
VSX2P58304 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC5.47□□□□□ -1.53
VSX2P58304 RPS23P2-201ENST00000463671 415 ntBASIC5.47□□□□□ -1.53
VSX2P58304 RN7SL570P-201ENST00000484405 292 ntBASIC5.47□□□□□ -1.53
VSX2P58304 AC012123.2-201ENST00000485809 248 ntBASIC5.47□□□□□ -1.53
VSX2P58304 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.47□□□□□ -1.53
VSX2P58304 AC074255.1-201ENST00000511259 501 ntBASIC5.47□□□□□ -1.53
VSX2P58304 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.47□□□□□ -1.53
VSX2P58304 IGBP1P1-201ENST00000554337 1009 ntBASIC5.47□□□□□ -1.53
VSX2P58304 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.47□□□□□ -1.53
VSX2P58304 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.47□□□□□ -1.53
VSX2P58304 DPPA2P4-201ENST00000563717 878 ntBASIC5.47□□□□□ -1.53
VSX2P58304 AC010547.6-201ENST00000571789 193 ntBASIC5.47□□□□□ -1.53
VSX2P58304 AC006115.2-201ENST00000596823 202 ntBASIC5.47□□□□□ -1.53
VSX2P58304 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
VSX2P58304 AL513327.3-201ENST00000602618 469 ntBASIC5.47□□□□□ -1.53
VSX2P58304 LSM1P2-201ENST00000604911 322 ntBASIC5.47□□□□□ -1.53
VSX2P58304 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.47□□□□□ -1.53
VSX2P58304 AC090607.5-201ENST00000615692 224 ntBASIC5.47□□□□□ -1.53
VSX2P58304 MIR4302-201ENST00000638058 60 ntBASIC5.47□□□□□ -1.53
VSX2P58304 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.47□□□□□ -1.53
VSX2P58304 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.47□□□□□ -1.53
VSX2P58304 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
VSX2P58304 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
VSX2P58304 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.47□□□□□ -1.53
VSX2P58304 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
VSX2P58304 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
VSX2P58304 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms