Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC5.8□□□□□ -1.48
SUMO3P55854 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SUMO3P55854 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
SUMO3P55854 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SUMO3P55854 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SUMO3P55854 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SUMO3P55854 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SUMO3P55854 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC5.8□□□□□ -1.48
SUMO3P55854 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.8□□□□□ -1.48
SUMO3P55854 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC5.8□□□□□ -1.48
SUMO3P55854 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SUMO3P55854 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
SUMO3P55854 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC5.8□□□□□ -1.48
SUMO3P55854 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SUMO3P55854 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC5.8□□□□□ -1.48
SUMO3P55854 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
SUMO3P55854 RNU6-452P-201ENST00000384406 107 ntBASIC5.8□□□□□ -1.48
SUMO3P55854 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SUMO3P55854 AP000357.1-201ENST00000409926 1165 ntBASIC5.8□□□□□ -1.48
SUMO3P55854 RN7SKP161-201ENST00000411110 305 ntBASIC5.8□□□□□ -1.48
SUMO3P55854 OR51B3P-201ENST00000412287 913 ntBASIC5.8□□□□□ -1.48
SUMO3P55854 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
SUMO3P55854 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC5.8□□□□□ -1.48
SUMO3P55854 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC5.8□□□□□ -1.48
SUMO3P55854 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC5.8□□□□□ -1.48
SUMO3P55854 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC5.8□□□□□ -1.48
SUMO3P55854 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.8□□□□□ -1.48
SUMO3P55854 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SUMO3P55854 AC073476.1-201ENST00000452854 407 ntBASIC5.8□□□□□ -1.48
SUMO3P55854 AC099670.1-201ENST00000455141 783 ntBASIC5.8□□□□□ -1.48
SUMO3P55854 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC5.8□□□□□ -1.48
SUMO3P55854 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC5.8□□□□□ -1.48
SUMO3P55854 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC5.8□□□□□ -1.48
SUMO3P55854 RPS7P10-201ENST00000464254 603 ntBASIC5.8□□□□□ -1.48
SUMO3P55854 RN7SL612P-201ENST00000497704 295 ntBASIC5.8□□□□□ -1.48
SUMO3P55854 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC5.8□□□□□ -1.48
SUMO3P55854 NACAP5-201ENST00000509863 636 ntBASIC5.8□□□□□ -1.48
SUMO3P55854 SNORA74.1-201ENST00000516320 180 ntBASIC5.8□□□□□ -1.48
SUMO3P55854 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC5.8□□□□□ -1.48
SUMO3P55854 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC5.8□□□□□ -1.48
SUMO3P55854 FCF1-203ENST00000553615 954 ntTSL 3 BASIC5.8□□□□□ -1.48
SUMO3P55854 OR11H3P-201ENST00000554547 982 ntBASIC5.8□□□□□ -1.48
SUMO3P55854 AL121579.2-201ENST00000555466 590 ntBASIC5.8□□□□□ -1.48
SUMO3P55854 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC5.8□□□□□ -1.48
SUMO3P55854 AL356801.1-201ENST00000559320 294 ntBASIC5.8□□□□□ -1.48
SUMO3P55854 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC5.8□□□□□ -1.48
SUMO3P55854 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC5.8□□□□□ -1.48
SUMO3P55854 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC5.8□□□□□ -1.48
SUMO3P55854 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC5.8□□□□□ -1.48
SUMO3P55854 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SUMO3P55854 AL450336.1-201ENST00000605180 586 ntBASIC5.8□□□□□ -1.48
SUMO3P55854 NQO2-209ENST00000606474 470 ntTSL 3 BASIC5.8□□□□□ -1.48
SUMO3P55854 AC106052.1-201ENST00000608029 497 ntBASIC5.8□□□□□ -1.48
SUMO3P55854 AL008723.3-201ENST00000608926 449 ntBASIC5.8□□□□□ -1.48
SUMO3P55854 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SUMO3P55854 AC015660.5-201ENST00000623238 564 ntBASIC5.8□□□□□ -1.48
SUMO3P55854 AC006963.1-201ENST00000624003 1052 ntBASIC5.8□□□□□ -1.48
SUMO3P55854 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC5.8□□□□□ -1.48
SUMO3P55854 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SUMO3P55854 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC5.8□□□□□ -1.48
SUMO3P55854 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SUMO3P55854 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC5.8□□□□□ -1.48
SUMO3P55854 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SUMO3P55854 ST7-203ENST00000393443 2360 ntTSL 2 BASIC5.8□□□□□ -1.48
SUMO3P55854 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC5.8□□□□□ -1.48
SUMO3P55854 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC5.8□□□□□ -1.48
SUMO3P55854 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SUMO3P55854 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SUMO3P55854 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
SUMO3P55854 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SUMO3P55854 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SUMO3P55854 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.79□□□□□ -1.48
SUMO3P55854 PCF11-AS1-201ENST00000602322 1516 ntBASIC5.79□□□□□ -1.48
SUMO3P55854 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SUMO3P55854 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
SUMO3P55854 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SUMO3P55854 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SUMO3P55854 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SUMO3P55854 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SUMO3P55854 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
SUMO3P55854 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SUMO3P55854 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
SUMO3P55854 SNORD8-201ENST00000363915 110 ntBASIC5.79□□□□□ -1.48
SUMO3P55854 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SUMO3P55854 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.79□□□□□ -1.48
SUMO3P55854 RNU6-185P-201ENST00000384421 107 ntBASIC5.79□□□□□ -1.48
SUMO3P55854 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC5.79□□□□□ -1.48
SUMO3P55854 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC5.79□□□□□ -1.48
SUMO3P55854 CYP4F30P-202ENST00000420048 405 ntBASIC5.79□□□□□ -1.48
SUMO3P55854 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.79□□□□□ -1.48
SUMO3P55854 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
SUMO3P55854 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC5.79□□□□□ -1.48
SUMO3P55854 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC5.79□□□□□ -1.48
SUMO3P55854 USP9YP24-201ENST00000434374 697 ntBASIC5.79□□□□□ -1.48
SUMO3P55854 AL390879.1-201ENST00000439143 386 ntBASIC5.79□□□□□ -1.48
SUMO3P55854 OR2L9P-201ENST00000444456 913 ntBASIC5.79□□□□□ -1.48
SUMO3P55854 USP9YP17-201ENST00000444617 696 ntBASIC5.79□□□□□ -1.48
SUMO3P55854 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC5.79□□□□□ -1.48
SUMO3P55854 TRY2P-201ENST00000448860 689 ntBASIC5.79□□□□□ -1.48
SUMO3P55854 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms