Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.29□□□□□ -1.4
VCPP55072 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC6.29□□□□□ -1.4
VCPP55072 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
VCPP55072 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
VCPP55072 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
VCPP55072 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
VCPP55072 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
VCPP55072 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
VCPP55072 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
VCPP55072 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
VCPP55072 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.28□□□□□ -1.4
VCPP55072 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
VCPP55072 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
VCPP55072 SELE-204ENST00000367776 3576 ntTSL 5 BASIC6.28□□□□□ -1.4
VCPP55072 SELE-205ENST00000367777 3576 ntTSL 5 BASIC6.28□□□□□ -1.4
VCPP55072 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
VCPP55072 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
VCPP55072 AL645927.1-201ENST00000396783 406 ntBASIC6.28□□□□□ -1.4
VCPP55072 RN7SKP166-201ENST00000410812 305 ntBASIC6.28□□□□□ -1.4
VCPP55072 CCNB1IP1P1-201ENST00000428976 839 ntBASIC6.28□□□□□ -1.4
VCPP55072 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC6.28□□□□□ -1.4
VCPP55072 AL645937.3-201ENST00000453647 936 ntBASIC6.28□□□□□ -1.4
VCPP55072 AC011225.1-201ENST00000457751 369 ntBASIC6.28□□□□□ -1.4
VCPP55072 AC090589.1-201ENST00000473109 362 ntBASIC6.28□□□□□ -1.4
VCPP55072 RPL23AP40-201ENST00000487630 390 ntBASIC6.28□□□□□ -1.4
VCPP55072 TRBV5-2-201ENST00000489095 273 ntBASIC6.28□□□□□ -1.4
VCPP55072 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC6.28□□□□□ -1.4
VCPP55072 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC6.28□□□□□ -1.4
VCPP55072 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC6.28□□□□□ -1.4
VCPP55072 CASP5-209ENST00000531367 879 ntTSL 5 BASIC6.28□□□□□ -1.4
VCPP55072 PCNAP4-201ENST00000532690 730 ntBASIC6.28□□□□□ -1.4
VCPP55072 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC6.28□□□□□ -1.4
VCPP55072 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
VCPP55072 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC6.28□□□□□ -1.4
VCPP55072 STARD6-202ENST00000577499 696 ntTSL 2 BASIC6.28□□□□□ -1.4
VCPP55072 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC6.28□□□□□ -1.4
VCPP55072 AC107993.1-201ENST00000591343 684 ntBASIC6.28□□□□□ -1.4
VCPP55072 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
VCPP55072 HOTTIP_3.1-201ENST00000619957 337 ntBASIC6.28□□□□□ -1.4
VCPP55072 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC6.28□□□□□ -1.4
VCPP55072 MAPK10-350ENST00000641777 965 ntBASIC6.28□□□□□ -1.4
VCPP55072 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
VCPP55072 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC6.28□□□□□ -1.4
VCPP55072 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
VCPP55072 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
VCPP55072 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
VCPP55072 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC6.28□□□□□ -1.4
VCPP55072 AL592429.1-201ENST00000403909 1473 ntBASIC6.28□□□□□ -1.4
VCPP55072 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC6.27□□□□□ -1.4
VCPP55072 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC6.27□□□□□ -1.4
VCPP55072 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
VCPP55072 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
VCPP55072 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
VCPP55072 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
VCPP55072 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
VCPP55072 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
VCPP55072 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
VCPP55072 OR5AQ1P-202ENST00000641257 1534 ntBASIC6.27□□□□□ -1.41
VCPP55072 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
VCPP55072 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
VCPP55072 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
VCPP55072 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
VCPP55072 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
VCPP55072 OR7E101P-201ENST00000400428 513 ntBASIC6.27□□□□□ -1.41
VCPP55072 SNRPEP6-201ENST00000407465 277 ntBASIC6.27□□□□□ -1.41
VCPP55072 RN7SKP279-201ENST00000411383 298 ntBASIC6.27□□□□□ -1.41
VCPP55072 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC6.27□□□□□ -1.41
VCPP55072 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
VCPP55072 FMO7P-201ENST00000436045 768 ntBASIC6.27□□□□□ -1.41
VCPP55072 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC6.27□□□□□ -1.41
VCPP55072 AL606490.1-201ENST00000452266 765 ntBASIC6.27□□□□□ -1.41
VCPP55072 snoU13.29-201ENST00000459370 104 ntBASIC6.27□□□□□ -1.41
VCPP55072 AL122020.1-201ENST00000472287 459 ntBASIC6.27□□□□□ -1.41
VCPP55072 TOMM22P4-201ENST00000511318 336 ntBASIC6.27□□□□□ -1.41
VCPP55072 RNA5SP228-201ENST00000516232 133 ntBASIC6.27□□□□□ -1.41
VCPP55072 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC6.27□□□□□ -1.41
VCPP55072 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC6.27□□□□□ -1.41
VCPP55072 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC6.27□□□□□ -1.41
VCPP55072 NPM1P42-201ENST00000560329 862 ntBASIC6.27□□□□□ -1.41
VCPP55072 AC083837.1-201ENST00000565297 2994 ntBASIC6.27□□□□□ -1.41
VCPP55072 MIR3691-201ENST00000578066 90 ntBASIC6.27□□□□□ -1.41
VCPP55072 AP002884.5-201ENST00000595053 1132 ntBASIC6.27□□□□□ -1.41
VCPP55072 AC125494.2-201ENST00000602431 657 ntBASIC6.27□□□□□ -1.41
VCPP55072 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC6.27□□□□□ -1.41
VCPP55072 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC6.27□□□□□ -1.41
VCPP55072 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
VCPP55072 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC6.27□□□□□ -1.41
VCPP55072 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
VCPP55072 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
VCPP55072 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
VCPP55072 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
VCPP55072 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC6.26□□□□□ -1.41
VCPP55072 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
VCPP55072 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
VCPP55072 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC6.26□□□□□ -1.41
VCPP55072 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
VCPP55072 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC6.26□□□□□ -1.41
VCPP55072 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC6.26□□□□□ -1.41
VCPP55072 AL133270.1-201ENST00000402635 279 ntBASIC6.26□□□□□ -1.41
VCPP55072 SNORA11-201ENST00000408789 128 ntBASIC6.26□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms