Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 AC007204.2-201ENST00000615022 616 ntBASIC6.28□□□□□ -1.4
CLCN3P51790 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CLCN3P51790 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.28□□□□□ -1.4
CLCN3P51790 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
CLCN3P51790 Z83820.1-201ENST00000456978 1499 ntBASIC6.28□□□□□ -1.4
CLCN3P51790 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.4
CLCN3P51790 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CLCN3P51790 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.27□□□□□ -1.41
CLCN3P51790 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC6.27□□□□□ -1.41
CLCN3P51790 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CLCN3P51790 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CLCN3P51790 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
CLCN3P51790 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CLCN3P51790 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.27□□□□□ -1.41
CLCN3P51790 RNU4-23P-201ENST00000362839 140 ntBASIC6.27□□□□□ -1.41
CLCN3P51790 SNORD1C-201ENST00000363315 78 ntBASIC6.27□□□□□ -1.41
CLCN3P51790 AL451142.1-201ENST00000375867 775 ntBASIC6.27□□□□□ -1.41
CLCN3P51790 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CLCN3P51790 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC6.27□□□□□ -1.41
CLCN3P51790 NPM1P4-201ENST00000414095 812 ntBASIC6.27□□□□□ -1.41
CLCN3P51790 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC6.27□□□□□ -1.41
CLCN3P51790 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC6.27□□□□□ -1.41
CLCN3P51790 AC006335.2-201ENST00000437993 330 ntBASIC6.27□□□□□ -1.41
CLCN3P51790 LDHBP2-201ENST00000456969 1005 ntBASIC6.27□□□□□ -1.41
CLCN3P51790 RNU7-157P-201ENST00000459600 66 ntBASIC6.27□□□□□ -1.41
CLCN3P51790 RPS23P2-201ENST00000463671 415 ntBASIC6.27□□□□□ -1.41
CLCN3P51790 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.27□□□□□ -1.41
CLCN3P51790 UBA52P7-201ENST00000486088 380 ntBASIC6.27□□□□□ -1.41
CLCN3P51790 RN7SL547P-201ENST00000490793 290 ntBASIC6.27□□□□□ -1.41
CLCN3P51790 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC6.27□□□□□ -1.41
CLCN3P51790 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC6.27□□□□□ -1.41
CLCN3P51790 NRBF2P4-201ENST00000520874 850 ntBASIC6.27□□□□□ -1.41
CLCN3P51790 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC6.27□□□□□ -1.41
CLCN3P51790 AC130364.2-201ENST00000528639 604 ntBASIC6.27□□□□□ -1.41
CLCN3P51790 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC6.27□□□□□ -1.41
CLCN3P51790 SMARCE1P3-201ENST00000553649 1231 ntBASIC6.27□□□□□ -1.41
CLCN3P51790 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC6.27□□□□□ -1.41
CLCN3P51790 AC007448.1-201ENST00000582714 234 ntBASIC6.27□□□□□ -1.41
CLCN3P51790 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC6.27□□□□□ -1.41
CLCN3P51790 MAPK10-350ENST00000641777 965 ntBASIC6.27□□□□□ -1.41
CLCN3P51790 CD86-204ENST00000469710 1604 ntTSL 2 BASIC6.27□□□□□ -1.41
CLCN3P51790 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CLCN3P51790 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CLCN3P51790 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CLCN3P51790 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CLCN3P51790 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.27□□□□□ -1.41
CLCN3P51790 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CLCN3P51790 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
CLCN3P51790 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
CLCN3P51790 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC6.26□□□□□ -1.41
CLCN3P51790 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC6.26□□□□□ -1.41
CLCN3P51790 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC6.26□□□□□ -1.41
CLCN3P51790 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CLCN3P51790 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
CLCN3P51790 ALB-209ENST00000503124 1741 ntTSL 5 BASIC6.26□□□□□ -1.41
CLCN3P51790 RNA5SP234-201ENST00000363916 119 ntBASIC6.26□□□□□ -1.41
CLCN3P51790 RNA5SP251-201ENST00000410614 137 ntBASIC6.26□□□□□ -1.41
CLCN3P51790 GABARAPL3-201ENST00000412799 354 ntBASIC6.26□□□□□ -1.41
CLCN3P51790 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CLCN3P51790 RPS21P8-201ENST00000413365 247 ntBASIC6.26□□□□□ -1.41
CLCN3P51790 AL450023.1-201ENST00000450868 751 ntBASIC6.26□□□□□ -1.41
CLCN3P51790 VDAC2P4-201ENST00000452925 711 ntBASIC6.26□□□□□ -1.41
CLCN3P51790 AL133445.1-201ENST00000467051 452 ntBASIC6.26□□□□□ -1.41
CLCN3P51790 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC6.26□□□□□ -1.41
CLCN3P51790 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC6.26□□□□□ -1.41
CLCN3P51790 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC6.26□□□□□ -1.41
CLCN3P51790 AC025423.2-201ENST00000537570 439 ntBASIC6.26□□□□□ -1.41
CLCN3P51790 AC078878.1-201ENST00000539832 958 ntBASIC6.26□□□□□ -1.41
CLCN3P51790 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC6.26□□□□□ -1.41
CLCN3P51790 AL121594.2-201ENST00000541658 472 ntBASIC6.26□□□□□ -1.41
CLCN3P51790 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC6.26□□□□□ -1.41
CLCN3P51790 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CLCN3P51790 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC6.26□□□□□ -1.41
CLCN3P51790 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC6.26□□□□□ -1.41
CLCN3P51790 AC092944.2-201ENST00000605443 889 ntBASIC6.26□□□□□ -1.41
CLCN3P51790 AC096586.2-201ENST00000610260 441 ntBASIC6.26□□□□□ -1.41
CLCN3P51790 AL391597.1-201ENST00000618707 694 ntBASIC6.26□□□□□ -1.41
CLCN3P51790 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC6.26□□□□□ -1.41
CLCN3P51790 AL035661.1-201ENST00000620459 1144 ntBASIC6.26□□□□□ -1.41
CLCN3P51790 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC6.26□□□□□ -1.41
CLCN3P51790 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
CLCN3P51790 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CLCN3P51790 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CLCN3P51790 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.26□□□□□ -1.41
CLCN3P51790 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CLCN3P51790 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
CLCN3P51790 AC139426.3-201ENST00000605648 2059 ntBASIC6.26□□□□□ -1.41
CLCN3P51790 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC6.25□□□□□ -1.41
CLCN3P51790 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CLCN3P51790 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC6.25□□□□□ -1.41
CLCN3P51790 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CLCN3P51790 AC020656.2-201ENST00000613291 5309 ntBASIC6.25□□□□□ -1.41
CLCN3P51790 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
CLCN3P51790 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CLCN3P51790 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.25□□□□□ -1.41
CLCN3P51790 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CLCN3P51790 PWAR1-201ENST00000624188 2414 ntBASIC6.25□□□□□ -1.41
CLCN3P51790 NLN-202ENST00000502464 8354 ntTSL 5 BASIC6.25□□□□□ -1.41
CLCN3P51790 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
CLCN3P51790 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms