Protein–RNA interactions for Protein: P51531

SMARCA2, Probable global transcription activator SNF2L2, humanhuman

Predictions only

Length 1,590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2P51531 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
SMARCA2P51531 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC9.77□□□□□ -0.85
SMARCA2P51531 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC9.77□□□□□ -0.85
SMARCA2P51531 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC9.77□□□□□ -0.85
SMARCA2P51531 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC9.77□□□□□ -0.85
SMARCA2P51531 AP001885.1-201ENST00000621658 558 ntBASIC9.77□□□□□ -0.85
SMARCA2P51531 PPM1L-205ENST00000498165 10934 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
SMARCA2P51531 PCDH15-230ENST00000617051 7048 ntTSL 5 BASIC9.77□□□□□ -0.85
SMARCA2P51531 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
SMARCA2P51531 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC9.77□□□□□ -0.85
SMARCA2P51531 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
SMARCA2P51531 AP004607.3-201ENST00000530354 3915 ntBASIC9.77□□□□□ -0.85
SMARCA2P51531 NLRP3P1-201ENST00000622303 1785 ntBASIC9.77□□□□□ -0.85
SMARCA2P51531 FREM1-204ENST00000422223 10086 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
SMARCA2P51531 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC9.77□□□□□ -0.85
SMARCA2P51531 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
SMARCA2P51531 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
SMARCA2P51531 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
SMARCA2P51531 HLTF-203ENST00000465259 5306 ntAPPRIS ALT1 TSL 1 (best) BASIC9.77□□□□□ -0.85
SMARCA2P51531 MAP4K4-219ENST00000625522 7458 ntAPPRIS P5 TSL 5 BASIC9.76□□□□□ -0.85
SMARCA2P51531 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC9.76□□□□□ -0.85
SMARCA2P51531 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC9.76□□□□□ -0.85
SMARCA2P51531 AL451063.1-201ENST00000450164 1133 ntBASIC9.76□□□□□ -0.85
SMARCA2P51531 AC092647.2-201ENST00000452998 253 ntBASIC9.76□□□□□ -0.85
SMARCA2P51531 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC9.76□□□□□ -0.85
SMARCA2P51531 AL445687.2-201ENST00000458156 728 ntBASIC9.76□□□□□ -0.85
SMARCA2P51531 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC9.76□□□□□ -0.85
SMARCA2P51531 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC9.76□□□□□ -0.85
SMARCA2P51531 AC060766.1-201ENST00000590824 627 ntBASIC9.76□□□□□ -0.85
SMARCA2P51531 RPL27-207ENST00000590864 569 ntTSL 2 BASIC9.76□□□□□ -0.85
SMARCA2P51531 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC9.76□□□□□ -0.85
SMARCA2P51531 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC9.76□□□□□ -0.85
SMARCA2P51531 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
SMARCA2P51531 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC9.76□□□□□ -0.85
SMARCA2P51531 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
SMARCA2P51531 ZRANB1-201ENST00000359653 5695 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
SMARCA2P51531 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC9.75□□□□□ -0.85
SMARCA2P51531 RHOT1P3-201ENST00000436571 331 ntBASIC9.75□□□□□ -0.85
SMARCA2P51531 TOMM22P4-201ENST00000511318 336 ntBASIC9.75□□□□□ -0.85
SMARCA2P51531 RN7SKP98-201ENST00000517070 156 ntBASIC9.75□□□□□ -0.85
SMARCA2P51531 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC9.75□□□□□ -0.85
SMARCA2P51531 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC9.75□□□□□ -0.85
SMARCA2P51531 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC9.75□□□□□ -0.85
SMARCA2P51531 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC9.75□□□□□ -0.85
SMARCA2P51531 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
SMARCA2P51531 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC9.75□□□□□ -0.85
SMARCA2P51531 KLC1-204ENST00000348520 15091 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
SMARCA2P51531 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC9.75□□□□□ -0.85
SMARCA2P51531 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
SMARCA2P51531 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
SMARCA2P51531 MT-RNR2-201ENST00000387347 1559 ntBASIC9.75□□□□□ -0.85
SMARCA2P51531 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC9.75□□□□□ -0.85
SMARCA2P51531 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC9.75□□□□□ -0.85
SMARCA2P51531 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
SMARCA2P51531 RAB14-201ENST00000373840 4145 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
SMARCA2P51531 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
SMARCA2P51531 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
SMARCA2P51531 GMDS-AS1-202ENST00000505870 8217 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
SMARCA2P51531 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC9.75□□□□□ -0.85
SMARCA2P51531 HCG14-201ENST00000444986 413 ntTSL 2 BASIC9.75□□□□□ -0.85
SMARCA2P51531 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC9.75□□□□□ -0.85
SMARCA2P51531 RPL7P16-201ENST00000479738 738 ntBASIC9.75□□□□□ -0.85
SMARCA2P51531 RNA5SP373-201ENST00000517271 95 ntBASIC9.75□□□□□ -0.85
SMARCA2P51531 IGHVII-44-2-201ENST00000517728 250 ntBASIC9.75□□□□□ -0.85
SMARCA2P51531 PMS2P3-207ENST00000529061 717 ntBASIC9.75□□□□□ -0.85
SMARCA2P51531 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC9.75□□□□□ -0.85
SMARCA2P51531 AL627230.1-201ENST00000613077 211 ntBASIC9.75□□□□□ -0.85
SMARCA2P51531 AL591926.8-201ENST00000616876 211 ntBASIC9.75□□□□□ -0.85
SMARCA2P51531 MVP-219ENST00000629059 120 ntTSL 5 BASIC9.75□□□□□ -0.85
SMARCA2P51531 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC9.75□□□□□ -0.85
SMARCA2P51531 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC9.75□□□□□ -0.85
SMARCA2P51531 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
SMARCA2P51531 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC9.74□□□□□ -0.85
SMARCA2P51531 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
SMARCA2P51531 ANKFY1-201ENST00000341657 7418 ntAPPRIS ALT1 TSL 5 BASIC9.74□□□□□ -0.85
SMARCA2P51531 ASPM-203ENST00000367409 10887 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
SMARCA2P51531 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
SMARCA2P51531 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
SMARCA2P51531 AL133482.1-201ENST00000415988 498 ntBASIC9.74□□□□□ -0.85
SMARCA2P51531 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC9.74□□□□□ -0.85
SMARCA2P51531 AL596266.1-201ENST00000448132 400 ntBASIC9.74□□□□□ -0.85
SMARCA2P51531 RPS7P6-201ENST00000485777 579 ntBASIC9.74□□□□□ -0.85
SMARCA2P51531 SCARNA16.4-201ENST00000516956 187 ntBASIC9.74□□□□□ -0.85
SMARCA2P51531 AC134349.2-201ENST00000535136 910 ntBASIC9.74□□□□□ -0.85
SMARCA2P51531 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC9.74□□□□□ -0.85
SMARCA2P51531 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC9.74□□□□□ -0.85
SMARCA2P51531 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
SMARCA2P51531 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
SMARCA2P51531 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
SMARCA2P51531 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
SMARCA2P51531 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC9.73□□□□□ -0.85
SMARCA2P51531 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
SMARCA2P51531 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
SMARCA2P51531 MYO10-201ENST00000274203 11456 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
SMARCA2P51531 CCDC162P-202ENST00000368966 6751 ntBASIC9.73□□□□□ -0.85
SMARCA2P51531 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC9.73□□□□□ -0.85
SMARCA2P51531 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC9.73□□□□□ -0.85
SMARCA2P51531 RNA5-8SP5-201ENST00000365304 152 ntBASIC9.73□□□□□ -0.85
SMARCA2P51531 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
SMARCA2P51531 AC068538.1-201ENST00000376856 336 ntBASIC9.73□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms