Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
BRCC3P46736 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC6.03□□□□□ -1.44
BRCC3P46736 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
BRCC3P46736 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC6.03□□□□□ -1.44
BRCC3P46736 OR9K1P-201ENST00000326513 941 ntBASIC6.03□□□□□ -1.44
BRCC3P46736 AMELX-201ENST00000348912 737 ntTSL 5 BASIC6.03□□□□□ -1.44
BRCC3P46736 RNU6-171P-201ENST00000384354 107 ntBASIC6.03□□□□□ -1.44
BRCC3P46736 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
BRCC3P46736 CRIP1P1-201ENST00000427567 185 ntBASIC6.03□□□□□ -1.44
BRCC3P46736 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC6.03□□□□□ -1.44
BRCC3P46736 SPRYD7P1-201ENST00000443861 570 ntBASIC6.03□□□□□ -1.44
BRCC3P46736 AC011225.1-201ENST00000457751 369 ntBASIC6.03□□□□□ -1.44
BRCC3P46736 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC6.03□□□□□ -1.44
BRCC3P46736 BX510359.5-201ENST00000515651 304 ntBASIC6.03□□□□□ -1.44
BRCC3P46736 AC027308.1-201ENST00000517993 110 ntBASIC6.03□□□□□ -1.44
BRCC3P46736 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC6.03□□□□□ -1.44
BRCC3P46736 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC6.03□□□□□ -1.44
BRCC3P46736 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC6.03□□□□□ -1.44
BRCC3P46736 AGGF1P7-201ENST00000562369 913 ntBASIC6.03□□□□□ -1.44
BRCC3P46736 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC6.03□□□□□ -1.44
BRCC3P46736 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC6.03□□□□□ -1.44
BRCC3P46736 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.03□□□□□ -1.44
BRCC3P46736 SUGT1P3-202ENST00000604259 383 ntBASIC6.03□□□□□ -1.44
BRCC3P46736 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
BRCC3P46736 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
BRCC3P46736 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC6.03□□□□□ -1.44
BRCC3P46736 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
BRCC3P46736 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
BRCC3P46736 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
BRCC3P46736 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
BRCC3P46736 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
BRCC3P46736 CYP4Z2P-201ENST00000423332 1512 ntBASIC6.03□□□□□ -1.44
BRCC3P46736 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
BRCC3P46736 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
BRCC3P46736 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC6.03□□□□□ -1.44
BRCC3P46736 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
BRCC3P46736 AL591135.1-201ENST00000401578 5914 ntBASIC6.03□□□□□ -1.44
BRCC3P46736 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC6.02□□□□□ -1.45
BRCC3P46736 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
BRCC3P46736 SELE-204ENST00000367776 3576 ntTSL 5 BASIC6.02□□□□□ -1.45
BRCC3P46736 SELE-205ENST00000367777 3576 ntTSL 5 BASIC6.02□□□□□ -1.45
BRCC3P46736 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
BRCC3P46736 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
BRCC3P46736 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC6.02□□□□□ -1.45
BRCC3P46736 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC6.02□□□□□ -1.45
BRCC3P46736 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
BRCC3P46736 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
BRCC3P46736 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
BRCC3P46736 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC6.02□□□□□ -1.45
BRCC3P46736 BPHL-201ENST00000380368 797 ntTSL 5 BASIC6.02□□□□□ -1.45
BRCC3P46736 RPL23AP17-201ENST00000401064 499 ntBASIC6.02□□□□□ -1.45
BRCC3P46736 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC6.02□□□□□ -1.45
BRCC3P46736 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
BRCC3P46736 RPL34P27-201ENST00000428810 349 ntBASIC6.02□□□□□ -1.45
BRCC3P46736 KATNBL1P2-201ENST00000433311 835 ntBASIC6.02□□□□□ -1.45
BRCC3P46736 USP24P1-201ENST00000433802 779 ntBASIC6.02□□□□□ -1.45
BRCC3P46736 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC6.02□□□□□ -1.45
BRCC3P46736 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
BRCC3P46736 AC090638.1-201ENST00000498296 909 ntBASIC6.02□□□□□ -1.45
BRCC3P46736 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC6.02□□□□□ -1.45
BRCC3P46736 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.02□□□□□ -1.45
BRCC3P46736 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.02□□□□□ -1.45
BRCC3P46736 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.02□□□□□ -1.45
BRCC3P46736 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.02□□□□□ -1.45
BRCC3P46736 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC6.02□□□□□ -1.45
BRCC3P46736 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC6.02□□□□□ -1.45
BRCC3P46736 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC6.02□□□□□ -1.45
BRCC3P46736 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC6.02□□□□□ -1.45
BRCC3P46736 MIR1269B-201ENST00000580405 75 ntBASIC6.02□□□□□ -1.45
BRCC3P46736 FKBP1AP1-201ENST00000594588 318 ntBASIC6.02□□□□□ -1.45
BRCC3P46736 AC006115.2-201ENST00000596823 202 ntBASIC6.02□□□□□ -1.45
BRCC3P46736 AL513327.3-201ENST00000602618 469 ntBASIC6.02□□□□□ -1.45
BRCC3P46736 AC013244.1-201ENST00000604279 193 ntBASIC6.02□□□□□ -1.45
BRCC3P46736 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC6.02□□□□□ -1.45
BRCC3P46736 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC6.02□□□□□ -1.45
BRCC3P46736 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
BRCC3P46736 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC6.02□□□□□ -1.45
BRCC3P46736 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC6.02□□□□□ -1.45
BRCC3P46736 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC6.02□□□□□ -1.45
BRCC3P46736 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
BRCC3P46736 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
BRCC3P46736 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
BRCC3P46736 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC6.02□□□□□ -1.45
BRCC3P46736 AL161912.4-201ENST00000623889 2468 ntBASIC6.02□□□□□ -1.45
BRCC3P46736 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC6.02□□□□□ -1.45
BRCC3P46736 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
BRCC3P46736 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
BRCC3P46736 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.02□□□□□ -1.45
BRCC3P46736 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
BRCC3P46736 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
BRCC3P46736 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC6.01□□□□□ -1.45
BRCC3P46736 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.01□□□□□ -1.45
BRCC3P46736 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
BRCC3P46736 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
BRCC3P46736 AC235565.1-201ENST00000456962 1325 ntBASIC6.01□□□□□ -1.45
BRCC3P46736 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
BRCC3P46736 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
BRCC3P46736 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.01□□□□□ -1.45
BRCC3P46736 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
BRCC3P46736 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms