Protein–RNA interactions for Protein: P35452

HOXD12, Homeobox protein Hox-D12, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12P35452 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC6.21□□□□□ -1.42
HOXD12P35452 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC6.21□□□□□ -1.42
HOXD12P35452 AL358913.1-201ENST00000554342 121 ntBASIC6.21□□□□□ -1.42
HOXD12P35452 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC6.21□□□□□ -1.42
HOXD12P35452 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC6.21□□□□□ -1.42
HOXD12P35452 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC6.21□□□□□ -1.42
HOXD12P35452 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
HOXD12P35452 DNAJC19P3-201ENST00000594491 331 ntBASIC6.21□□□□□ -1.42
HOXD12P35452 AC073111.2-201ENST00000605657 1075 ntBASIC6.21□□□□□ -1.42
HOXD12P35452 AC012213.4-201ENST00000606457 354 ntBASIC6.21□□□□□ -1.42
HOXD12P35452 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC6.21□□□□□ -1.42
HOXD12P35452 AC108673.3-201ENST00000609183 335 ntBASIC6.21□□□□□ -1.42
HOXD12P35452 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC6.21□□□□□ -1.42
HOXD12P35452 AC022467.1-201ENST00000614738 749 ntBASIC6.21□□□□□ -1.42
HOXD12P35452 MIR6826-201ENST00000617808 98 ntBASIC6.21□□□□□ -1.42
HOXD12P35452 MIR7159-201ENST00000620587 66 ntBASIC6.21□□□□□ -1.42
HOXD12P35452 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
HOXD12P35452 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
HOXD12P35452 AC091305.2-201ENST00000624049 1576 ntBASIC6.21□□□□□ -1.42
HOXD12P35452 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
HOXD12P35452 AC025470.1-201ENST00000510053 2032 ntBASIC6.21□□□□□ -1.42
HOXD12P35452 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
HOXD12P35452 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.21□□□□□ -1.42
HOXD12P35452 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
HOXD12P35452 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
HOXD12P35452 OSBPL9P1-201ENST00000604744 1469 ntBASIC6.21□□□□□ -1.42
HOXD12P35452 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
HOXD12P35452 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
HOXD12P35452 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC6.21□□□□□ -1.42
HOXD12P35452 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
HOXD12P35452 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HOXD12P35452 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HOXD12P35452 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC6.2□□□□□ -1.42
HOXD12P35452 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC6.2□□□□□ -1.42
HOXD12P35452 AL592494.2-201ENST00000425455 1548 ntBASIC6.2□□□□□ -1.42
HOXD12P35452 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HOXD12P35452 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
HOXD12P35452 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
HOXD12P35452 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HOXD12P35452 RLIMP2-201ENST00000427891 1563 ntBASIC6.2□□□□□ -1.42
HOXD12P35452 AC068870.3-201ENST00000625077 2536 ntBASIC6.2□□□□□ -1.42
HOXD12P35452 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
HOXD12P35452 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
HOXD12P35452 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HOXD12P35452 RNA5SP350-201ENST00000363298 111 ntBASIC6.2□□□□□ -1.42
HOXD12P35452 RNU6-618P-201ENST00000363518 112 ntBASIC6.2□□□□□ -1.42
HOXD12P35452 RPS3AP2-201ENST00000407190 754 ntBASIC6.2□□□□□ -1.42
HOXD12P35452 RN7SKP286-201ENST00000410894 299 ntBASIC6.2□□□□□ -1.42
HOXD12P35452 AC245096.1-201ENST00000413104 546 ntBASIC6.2□□□□□ -1.42
HOXD12P35452 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC6.2□□□□□ -1.42
HOXD12P35452 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC6.2□□□□□ -1.42
HOXD12P35452 RPS7P8-201ENST00000418311 581 ntBASIC6.2□□□□□ -1.42
HOXD12P35452 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC6.2□□□□□ -1.42
HOXD12P35452 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HOXD12P35452 BX284632.2-201ENST00000421091 399 ntBASIC6.2□□□□□ -1.42
HOXD12P35452 AL121776.1-201ENST00000429337 372 ntBASIC6.2□□□□□ -1.42
HOXD12P35452 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC6.2□□□□□ -1.42
HOXD12P35452 GAPDHP48-201ENST00000436626 961 ntBASIC6.2□□□□□ -1.42
HOXD12P35452 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC6.2□□□□□ -1.42
HOXD12P35452 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC6.2□□□□□ -1.42
HOXD12P35452 MORF4-201ENST00000447135 971 ntBASIC6.2□□□□□ -1.42
HOXD12P35452 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HOXD12P35452 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HOXD12P35452 MORF4L1P4-201ENST00000450245 976 ntBASIC6.2□□□□□ -1.42
HOXD12P35452 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC6.2□□□□□ -1.42
HOXD12P35452 AC023141.9-201ENST00000458734 412 ntBASIC6.2□□□□□ -1.42
HOXD12P35452 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HOXD12P35452 RN7SL561P-201ENST00000488553 281 ntBASIC6.2□□□□□ -1.42
HOXD12P35452 OR9N1P-201ENST00000491296 333 ntBASIC6.2□□□□□ -1.42
HOXD12P35452 AL136038.1-201ENST00000497246 351 ntBASIC6.2□□□□□ -1.42
HOXD12P35452 PANCR-201ENST00000503456 493 ntTSL 5 BASIC6.2□□□□□ -1.42
HOXD12P35452 AC091965.3-201ENST00000506236 208 ntBASIC6.2□□□□□ -1.42
HOXD12P35452 RPL7L1P4-201ENST00000513004 707 ntBASIC6.2□□□□□ -1.42
HOXD12P35452 AP000648.1-201ENST00000529682 397 ntBASIC6.2□□□□□ -1.42
HOXD12P35452 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC6.2□□□□□ -1.42
HOXD12P35452 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HOXD12P35452 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC6.2□□□□□ -1.42
HOXD12P35452 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HOXD12P35452 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC6.2□□□□□ -1.42
HOXD12P35452 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC6.2□□□□□ -1.42
HOXD12P35452 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC6.2□□□□□ -1.42
HOXD12P35452 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC6.2□□□□□ -1.42
HOXD12P35452 MIR3176-201ENST00000582210 90 ntBASIC6.2□□□□□ -1.42
HOXD12P35452 AC090330.1-201ENST00000588646 764 ntBASIC6.2□□□□□ -1.42
HOXD12P35452 AL031601.1-201ENST00000605702 394 ntBASIC6.2□□□□□ -1.42
HOXD12P35452 AC110792.4-201ENST00000609843 298 ntBASIC6.2□□□□□ -1.42
HOXD12P35452 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC6.2□□□□□ -1.42
HOXD12P35452 AC006453.5-201ENST00000636451 619 ntBASIC6.2□□□□□ -1.42
HOXD12P35452 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HOXD12P35452 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
HOXD12P35452 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC6.2□□□□□ -1.42
HOXD12P35452 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HOXD12P35452 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
HOXD12P35452 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.2□□□□□ -1.42
HOXD12P35452 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HOXD12P35452 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
HOXD12P35452 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
HOXD12P35452 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.19□□□□□ -1.42
HOXD12P35452 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC6.19□□□□□ -1.42
HOXD12P35452 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms