Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 AC009784.1-201ENST00000426484 460 ntBASIC7.12□□□□□ -1.27
RFC4P35249 ELOCP3-201ENST00000439303 348 ntBASIC7.12□□□□□ -1.27
RFC4P35249 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC7.12□□□□□ -1.27
RFC4P35249 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
RFC4P35249 AC073850.1-201ENST00000449243 255 ntBASIC7.12□□□□□ -1.27
RFC4P35249 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC7.12□□□□□ -1.27
RFC4P35249 AC109462.1-201ENST00000491087 368 ntBASIC7.12□□□□□ -1.27
RFC4P35249 SNRPCP2-201ENST00000504370 475 ntBASIC7.12□□□□□ -1.27
RFC4P35249 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC7.12□□□□□ -1.27
RFC4P35249 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC7.12□□□□□ -1.27
RFC4P35249 CASC22-201ENST00000569713 386 ntTSL 5 BASIC7.12□□□□□ -1.27
RFC4P35249 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC7.12□□□□□ -1.27
RFC4P35249 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC7.12□□□□□ -1.27
RFC4P35249 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC7.12□□□□□ -1.27
RFC4P35249 AP002799.1-201ENST00000623552 423 ntBASIC7.12□□□□□ -1.27
RFC4P35249 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC7.12□□□□□ -1.27
RFC4P35249 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC7.12□□□□□ -1.27
RFC4P35249 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
RFC4P35249 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
RFC4P35249 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC7.12□□□□□ -1.27
RFC4P35249 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
RFC4P35249 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
RFC4P35249 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
RFC4P35249 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC7.12□□□□□ -1.27
RFC4P35249 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
RFC4P35249 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC7.12□□□□□ -1.27
RFC4P35249 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
RFC4P35249 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC7.11□□□□□ -1.27
RFC4P35249 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC7.11□□□□□ -1.27
RFC4P35249 HSPA8P18-201ENST00000439846 1928 ntBASIC7.11□□□□□ -1.27
RFC4P35249 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
RFC4P35249 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC7.11□□□□□ -1.27
RFC4P35249 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC7.11□□□□□ -1.27
RFC4P35249 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
RFC4P35249 MTHFD2P5-201ENST00000320415 844 ntBASIC7.11□□□□□ -1.27
RFC4P35249 MIR130A-201ENST00000385274 89 ntBASIC7.11□□□□□ -1.27
RFC4P35249 RNA5SP339-201ENST00000390987 122 ntBASIC7.11□□□□□ -1.27
RFC4P35249 AL109941.1-201ENST00000401925 229 ntBASIC7.11□□□□□ -1.27
RFC4P35249 RPS26P13-201ENST00000419030 330 ntBASIC7.11□□□□□ -1.27
RFC4P35249 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC7.11□□□□□ -1.27
RFC4P35249 AC016027.5-201ENST00000427227 210 ntBASIC7.11□□□□□ -1.27
RFC4P35249 AC006466.1-201ENST00000438721 289 ntBASIC7.11□□□□□ -1.27
RFC4P35249 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC7.11□□□□□ -1.27
RFC4P35249 AL389915.2-201ENST00000454576 441 ntBASIC7.11□□□□□ -1.27
RFC4P35249 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC7.11□□□□□ -1.27
RFC4P35249 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC7.11□□□□□ -1.27
RFC4P35249 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC7.11□□□□□ -1.27
RFC4P35249 DPPA3P2-202ENST00000557188 1219 ntBASIC7.11□□□□□ -1.27
RFC4P35249 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC7.11□□□□□ -1.27
RFC4P35249 AC006116.3-201ENST00000592968 361 ntBASIC7.11□□□□□ -1.27
RFC4P35249 CDC42EP3P1-201ENST00000601004 764 ntBASIC7.11□□□□□ -1.27
RFC4P35249 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC7.11□□□□□ -1.27
RFC4P35249 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC7.11□□□□□ -1.27
RFC4P35249 AL355974.3-201ENST00000617383 467 ntBASIC7.11□□□□□ -1.27
RFC4P35249 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
RFC4P35249 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC7.11□□□□□ -1.27
RFC4P35249 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
RFC4P35249 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC7.11□□□□□ -1.27
RFC4P35249 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
RFC4P35249 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
RFC4P35249 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
RFC4P35249 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
RFC4P35249 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
RFC4P35249 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
RFC4P35249 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC7.1□□□□□ -1.27
RFC4P35249 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC7.1□□□□□ -1.27
RFC4P35249 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
RFC4P35249 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
RFC4P35249 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
RFC4P35249 AL034546.1-201ENST00000623740 3693 ntBASIC7.1□□□□□ -1.27
RFC4P35249 AC020656.2-201ENST00000613291 5309 ntBASIC7.1□□□□□ -1.27
RFC4P35249 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
RFC4P35249 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
RFC4P35249 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
RFC4P35249 SSX3-202ENST00000376893 800 ntTSL 2 BASIC7.1□□□□□ -1.27
RFC4P35249 SNORA67-201ENST00000384423 137 ntBASIC7.1□□□□□ -1.27
RFC4P35249 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC7.1□□□□□ -1.27
RFC4P35249 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC7.1□□□□□ -1.27
RFC4P35249 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC7.1□□□□□ -1.27
RFC4P35249 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC7.1□□□□□ -1.27
RFC4P35249 AC105399.1-202ENST00000447303 205 ntBASIC7.1□□□□□ -1.27
RFC4P35249 CBX1P2-201ENST00000453841 458 ntBASIC7.1□□□□□ -1.27
RFC4P35249 DUTP1-201ENST00000493631 470 ntBASIC7.1□□□□□ -1.27
RFC4P35249 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC7.1□□□□□ -1.27
RFC4P35249 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC7.1□□□□□ -1.27
RFC4P35249 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC7.1□□□□□ -1.27
RFC4P35249 RNU6ATAC39P-201ENST00000516309 149 ntBASIC7.1□□□□□ -1.27
RFC4P35249 RNU6ATAC24P-201ENST00000516811 135 ntBASIC7.1□□□□□ -1.27
RFC4P35249 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
RFC4P35249 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC7.1□□□□□ -1.27
RFC4P35249 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC7.1□□□□□ -1.27
RFC4P35249 TAS2R6P-201ENST00000605022 826 ntBASIC7.1□□□□□ -1.27
RFC4P35249 AC025574.2-201ENST00000615621 514 ntBASIC7.1□□□□□ -1.27
RFC4P35249 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC7.1□□□□□ -1.27
RFC4P35249 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC7.1□□□□□ -1.27
RFC4P35249 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC7.1□□□□□ -1.27
RFC4P35249 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
RFC4P35249 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
RFC4P35249 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC7.1□□□□□ -1.27
RFC4P35249 CPS1-IT1-201ENST00000628368 2306 ntBASIC7.1□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms