Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 AL139407.1-201ENST00000613826 1175 ntBASIC8.82□□□□□ -1
CLIP1P30622 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC8.82□□□□□ -1
CLIP1P30622 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
CLIP1P30622 AC007114.2-201ENST00000576014 4281 ntBASIC8.82□□□□□ -1
CLIP1P30622 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
CLIP1P30622 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC8.82□□□□□ -1
CLIP1P30622 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC8.82□□□□□ -1
CLIP1P30622 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC8.82□□□□□ -1
CLIP1P30622 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
CLIP1P30622 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC8.82□□□□□ -1
CLIP1P30622 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC8.82□□□□□ -1
CLIP1P30622 AL139805.2-201ENST00000455305 2433 ntBASIC8.82□□□□□ -1
CLIP1P30622 MT-RNR2-201ENST00000387347 1559 ntBASIC8.81□□□□□ -1
CLIP1P30622 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC8.81□□□□□ -1
CLIP1P30622 MIR223-201ENST00000385204 110 ntBASIC8.81□□□□□ -1
CLIP1P30622 RNU4-64P-201ENST00000410795 131 ntBASIC8.81□□□□□ -1
CLIP1P30622 SLC35E1P1-201ENST00000419313 864 ntBASIC8.81□□□□□ -1
CLIP1P30622 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC8.81□□□□□ -1
CLIP1P30622 RN7SL51P-201ENST00000468230 285 ntBASIC8.81□□□□□ -1
CLIP1P30622 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC8.81□□□□□ -1
CLIP1P30622 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC8.81□□□□□ -1
CLIP1P30622 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC8.81□□□□□ -1
CLIP1P30622 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC8.81□□□□□ -1
CLIP1P30622 AL353729.2-201ENST00000605859 1249 ntBASIC8.81□□□□□ -1
CLIP1P30622 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC8.81□□□□□ -1
CLIP1P30622 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC8.81□□□□□ -1
CLIP1P30622 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC8.81□□□□□ -1
CLIP1P30622 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
CLIP1P30622 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC8.81□□□□□ -1
CLIP1P30622 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC8.81□□□□□ -1
CLIP1P30622 AL033543.1-201ENST00000623440 13454 ntBASIC8.81□□□□□ -1
CLIP1P30622 AC107980.1-201ENST00000558671 3355 ntBASIC8.81□□□□□ -1
CLIP1P30622 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
CLIP1P30622 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC8.81□□□□□ -1
CLIP1P30622 MRRFP1-201ENST00000435941 1675 ntBASIC8.81□□□□□ -1
CLIP1P30622 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC8.81□□□□□ -1
CLIP1P30622 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC8.8□□□□□ -1
CLIP1P30622 RNU4-2-201ENST00000365668 141 ntBASIC8.8□□□□□ -1
CLIP1P30622 MIR551A-201ENST00000385042 96 ntBASIC8.8□□□□□ -1
CLIP1P30622 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC8.8□□□□□ -1
CLIP1P30622 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC8.8□□□□□ -1
CLIP1P30622 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC8.8□□□□□ -1
CLIP1P30622 AURKAPS1-201ENST00000451805 1212 ntBASIC8.8□□□□□ -1
CLIP1P30622 NDUFA5P12-201ENST00000503796 343 ntBASIC8.8□□□□□ -1
CLIP1P30622 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC8.8□□□□□ -1
CLIP1P30622 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC8.8□□□□□ -1
CLIP1P30622 OR5AM1P-201ENST00000532136 1032 ntBASIC8.8□□□□□ -1
CLIP1P30622 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC8.8□□□□□ -1
CLIP1P30622 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC8.8□□□□□ -1
CLIP1P30622 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC8.8□□□□□ -1
CLIP1P30622 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC8.8□□□□□ -1
CLIP1P30622 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC8.8□□□□□ -1
CLIP1P30622 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
CLIP1P30622 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
CLIP1P30622 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
CLIP1P30622 AC013268.3-201ENST00000262716 2324 ntBASIC8.8□□□□□ -1
CLIP1P30622 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC8.8□□□□□ -1
CLIP1P30622 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
CLIP1P30622 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC8.8□□□□□ -1
CLIP1P30622 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
CLIP1P30622 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC8.8□□□□□ -1
CLIP1P30622 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
CLIP1P30622 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC8.8□□□□□ -1
CLIP1P30622 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC8.8□□□□□ -1
CLIP1P30622 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
CLIP1P30622 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC8.8□□□□□ -1
CLIP1P30622 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC8.8□□□□□ -1
CLIP1P30622 RPL23AP27-201ENST00000415161 451 ntBASIC8.8□□□□□ -1
CLIP1P30622 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC8.8□□□□□ -1
CLIP1P30622 SRSF1P1-201ENST00000424058 520 ntBASIC8.8□□□□□ -1
CLIP1P30622 H3F3BP1-201ENST00000440551 403 ntBASIC8.8□□□□□ -1
CLIP1P30622 OTX2P1-201ENST00000450956 354 ntBASIC8.8□□□□□ -1
CLIP1P30622 RPS4XP1-201ENST00000482189 787 ntBASIC8.8□□□□□ -1
CLIP1P30622 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC8.8□□□□□ -1
CLIP1P30622 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC8.8□□□□□ -1
CLIP1P30622 OR10G5P-201ENST00000532733 358 ntBASIC8.8□□□□□ -1
CLIP1P30622 NMNAT1P5-201ENST00000559657 841 ntBASIC8.8□□□□□ -1
CLIP1P30622 PACRG-210ENST00000611387 279 ntTSL 5 BASIC8.8□□□□□ -1
CLIP1P30622 AL121612.2-201ENST00000612261 482 ntBASIC8.8□□□□□ -1
CLIP1P30622 AC069542.2-201ENST00000624816 216 ntBASIC8.8□□□□□ -1
CLIP1P30622 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC8.79□□□□□ -1
CLIP1P30622 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC8.79□□□□□ -1
CLIP1P30622 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
CLIP1P30622 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC8.79□□□□□ -1
CLIP1P30622 KYNUP3-201ENST00000574386 1341 ntBASIC8.79□□□□□ -1
CLIP1P30622 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
CLIP1P30622 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC8.79□□□□□ -1
CLIP1P30622 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC8.79□□□□□ -1
CLIP1P30622 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC8.79□□□□□ -1
CLIP1P30622 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
CLIP1P30622 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC8.79□□□□□ -1
CLIP1P30622 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC8.79□□□□□ -1
CLIP1P30622 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC8.79□□□□□ -1
CLIP1P30622 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC8.79□□□□□ -1
CLIP1P30622 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
CLIP1P30622 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
CLIP1P30622 U3.10-201ENST00000364459 214 ntBASIC8.79□□□□□ -1
CLIP1P30622 RN7SKP6-201ENST00000364795 319 ntBASIC8.79□□□□□ -1
CLIP1P30622 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC8.79□□□□□ -1
CLIP1P30622 AL009179.1-201ENST00000406085 265 ntBASIC8.79□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms