Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 AC006840.1-201ENST00000623069 542 ntBASIC7.8□□□□□ -1.16
VARSP26640 LINC01440-208ENST00000627300 699 ntTSL 5 BASIC7.8□□□□□ -1.16
VARSP26640 AC087885.1-201ENST00000641910 848 ntBASIC7.8□□□□□ -1.16
VARSP26640 ZNF845-202ENST00000595091 4413 ntAPPRIS P1 TSL 4 BASIC7.8□□□□□ -1.16
VARSP26640 AC119674.1-202ENST00000641333 1860 ntBASIC7.8□□□□□ -1.16
VARSP26640 LINC02179-201ENST00000561523 3673 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
VARSP26640 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
VARSP26640 RUNDC3A-AS1-202ENST00000588097 5203 ntTSL 5 BASIC7.8□□□□□ -1.16
VARSP26640 AMBN-203ENST00000613447 1997 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
VARSP26640 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC7.8□□□□□ -1.16
VARSP26640 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
VARSP26640 AC138915.3-201ENST00000562908 1389 ntBASIC7.8□□□□□ -1.16
VARSP26640 AL161725.1-201ENST00000591577 1351 ntTSL 5 BASIC7.8□□□□□ -1.16
VARSP26640 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
VARSP26640 KLRD1-201ENST00000336164 3258 ntAPPRIS P4 TSL 1 (best) BASIC7.8□□□□□ -1.16
VARSP26640 GSTM2-204ENST00000369831 1730 ntTSL 2 BASIC7.8□□□□□ -1.16
VARSP26640 AC004941.1-201ENST00000417506 3120 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
VARSP26640 MAGEB18-201ENST00000325250 1811 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
VARSP26640 AL589993.1-201ENST00000407450 2524 ntBASIC7.8□□□□□ -1.16
VARSP26640 MAPK10-319ENST00000641459 2542 ntBASIC7.8□□□□□ -1.16
VARSP26640 HMGXB4-201ENST00000216106 4047 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
VARSP26640 TMEM45A-201ENST00000323523 1567 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
VARSP26640 RIPOR2-208ENST00000613507 5539 ntAPPRIS P4 TSL 5 BASIC7.8□□□□□ -1.16
VARSP26640 NAA11-201ENST00000286794 2014 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
VARSP26640 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC7.79□□□□□ -1.16
VARSP26640 ZFP2-202ENST00000520301 2043 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
VARSP26640 PIAS1-201ENST00000249636 8115 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
VARSP26640 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
VARSP26640 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
VARSP26640 FRYL-210ENST00000507711 5277 ntTSL 2 BASIC7.79□□□□□ -1.16
VARSP26640 NDFIP2-206ENST00000620924 2324 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
VARSP26640 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
VARSP26640 RGS7-201ENST00000348120 1980 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
VARSP26640 TRAM2-201ENST00000182527 6908 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
VARSP26640 KAT6A-201ENST00000265713 9153 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
VARSP26640 CAST-228ENST00000509903 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
VARSP26640 ZKSCAN5-201ENST00000326775 4178 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
VARSP26640 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC7.79□□□□□ -1.16
VARSP26640 HMGB1P5-201ENST00000255320 642 ntBASIC7.79□□□□□ -1.16
VARSP26640 VNN3-201ENST00000275223 1260 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
VARSP26640 ANKS1B-201ENST00000329257 996 ntTSL 5 BASIC7.79□□□□□ -1.16
VARSP26640 RNU1-21P-201ENST00000363327 163 ntBASIC7.79□□□□□ -1.16
VARSP26640 MIR525-201ENST00000384978 85 ntBASIC7.79□□□□□ -1.16
VARSP26640 Z97832.1-201ENST00000402490 328 ntBASIC7.79□□□□□ -1.16
VARSP26640 CCNYL3-201ENST00000407030 998 ntBASIC7.79□□□□□ -1.16
VARSP26640 RNA5SP265-201ENST00000411023 111 ntBASIC7.79□□□□□ -1.16
VARSP26640 VDAC1P2-201ENST00000423609 850 ntBASIC7.79□□□□□ -1.16
VARSP26640 AL645936.2-201ENST00000430565 928 ntBASIC7.79□□□□□ -1.16
VARSP26640 MYO5BP3-201ENST00000431872 1279 ntBASIC7.79□□□□□ -1.16
VARSP26640 CALM1P1-201ENST00000442082 433 ntBASIC7.79□□□□□ -1.16
VARSP26640 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC7.79□□□□□ -1.16
VARSP26640 OR52E7P-201ENST00000452394 933 ntBASIC7.79□□□□□ -1.16
VARSP26640 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC7.79□□□□□ -1.16
VARSP26640 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC7.79□□□□□ -1.16
VARSP26640 RPL7AP56-201ENST00000476420 791 ntBASIC7.79□□□□□ -1.16
VARSP26640 PRICKLE2-AS2-201ENST00000484703 496 ntTSL 3 BASIC7.79□□□□□ -1.16
VARSP26640 RN7SL314P-201ENST00000490735 292 ntBASIC7.79□□□□□ -1.16
VARSP26640 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC7.79□□□□□ -1.16
VARSP26640 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC7.79□□□□□ -1.16
VARSP26640 AC068898.2-201ENST00000514425 597 ntTSL 4 BASIC7.79□□□□□ -1.16
VARSP26640 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC7.79□□□□□ -1.16
VARSP26640 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC7.79□□□□□ -1.16
VARSP26640 AAMDC-203ENST00000525034 511 ntTSL 3 BASIC7.79□□□□□ -1.16
VARSP26640 ZNF726-203ENST00000525354 806 ntTSL 2 BASIC7.79□□□□□ -1.16
VARSP26640 AP005597.4-201ENST00000526762 229 ntBASIC7.79□□□□□ -1.16
VARSP26640 AP003049.2-201ENST00000532992 540 ntTSL 4 BASIC7.79□□□□□ -1.16
VARSP26640 AC078950.1-204ENST00000540635 523 ntTSL 3 BASIC7.79□□□□□ -1.16
VARSP26640 AC138123.2-204ENST00000547432 721 ntTSL 3 BASIC7.79□□□□□ -1.16
VARSP26640 AC069240.2-201ENST00000550242 609 ntBASIC7.79□□□□□ -1.16
VARSP26640 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC7.79□□□□□ -1.16
VARSP26640 AC092720.1-203ENST00000563921 550 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
VARSP26640 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
VARSP26640 AC090287.1-201ENST00000578374 291 ntBASIC7.79□□□□□ -1.16
VARSP26640 MIR4258-201ENST00000580920 91 ntBASIC7.79□□□□□ -1.16
VARSP26640 STARD6-204ENST00000584040 660 ntTSL 3 BASIC7.79□□□□□ -1.16
VARSP26640 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC7.79□□□□□ -1.16
VARSP26640 APOC1-202ENST00000588750 689 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
VARSP26640 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC7.79□□□□□ -1.16
VARSP26640 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC7.79□□□□□ -1.16
VARSP26640 AL136363.1-201ENST00000605349 337 ntBASIC7.79□□□□□ -1.16
VARSP26640 AC005303.1-201ENST00000607906 740 ntTSL 5 BASIC7.79□□□□□ -1.16
VARSP26640 AC000068.3-201ENST00000607934 427 ntBASIC7.79□□□□□ -1.16
VARSP26640 AP001521.2-201ENST00000608772 546 ntBASIC7.79□□□□□ -1.16
VARSP26640 7SK.12-201ENST00000612820 244 ntBASIC7.79□□□□□ -1.16
VARSP26640 AC116165.3-201ENST00000614524 400 ntBASIC7.79□□□□□ -1.16
VARSP26640 AC243830.3-201ENST00000616810 376 ntBASIC7.79□□□□□ -1.16
VARSP26640 AL603758.1-201ENST00000618654 241 ntBASIC7.79□□□□□ -1.16
VARSP26640 LINC02034-201ENST00000635368 760 ntTSL 5 BASIC7.79□□□□□ -1.16
VARSP26640 GPM6A-202ENST00000393658 2821 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
VARSP26640 NCKAP1L-201ENST00000293373 9016 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
VARSP26640 TIMD4-201ENST00000274532 1369 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
VARSP26640 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
VARSP26640 SPANXN2-201ENST00000598475 1378 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
VARSP26640 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC7.79□□□□□ -1.16
VARSP26640 LIN28B-201ENST00000345080 5505 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
VARSP26640 GUCY2GP-201ENST00000479705 3222 ntBASIC7.79□□□□□ -1.16
VARSP26640 AC006058.1-201ENST00000568686 5067 ntBASIC7.79□□□□□ -1.16
VARSP26640 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC7.79□□□□□ -1.16
VARSP26640 C8orf37-201ENST00000286688 3334 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
VARSP26640 ZNF667-202ENST00000504904 4390 ntAPPRIS P1 TSL 2 BASIC7.79□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms