Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AL021918.2-201ENST00000613415 194 ntBASIC5.79□□□□□ -1.48
CDH3P22223 REV3L-214ENST00000619481 969 ntTSL 5 BASIC5.79□□□□□ -1.48
CDH3P22223 SNX18P12-201ENST00000624821 759 ntBASIC5.79□□□□□ -1.48
CDH3P22223 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.79□□□□□ -1.48
CDH3P22223 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.79□□□□□ -1.48
CDH3P22223 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.79□□□□□ -1.48
CDH3P22223 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.79□□□□□ -1.48
CDH3P22223 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CDH3P22223 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
CDH3P22223 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CDH3P22223 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.79□□□□□ -1.48
CDH3P22223 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CDH3P22223 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CDH3P22223 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.79□□□□□ -1.48
CDH3P22223 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
CDH3P22223 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.79□□□□□ -1.48
CDH3P22223 TCP11X1-202ENST00000622971 1372 ntBASIC5.79□□□□□ -1.48
CDH3P22223 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.79□□□□□ -1.48
CDH3P22223 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
CDH3P22223 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC5.78□□□□□ -1.48
CDH3P22223 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CDH3P22223 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CDH3P22223 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
CDH3P22223 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CDH3P22223 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CDH3P22223 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
CDH3P22223 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CDH3P22223 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
CDH3P22223 TMSB4XP2-201ENST00000335179 210 ntBASIC5.78□□□□□ -1.48
CDH3P22223 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CDH3P22223 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
CDH3P22223 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CDH3P22223 RNA5SP510-201ENST00000364697 99 ntBASIC5.78□□□□□ -1.48
CDH3P22223 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CDH3P22223 LYPLA1P3-201ENST00000402650 695 ntBASIC5.78□□□□□ -1.48
CDH3P22223 SLC20A1P1-201ENST00000413906 956 ntBASIC5.78□□□□□ -1.48
CDH3P22223 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.78□□□□□ -1.48
CDH3P22223 AC007562.1-201ENST00000421819 517 ntBASIC5.78□□□□□ -1.48
CDH3P22223 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
CDH3P22223 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.78□□□□□ -1.48
CDH3P22223 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.78□□□□□ -1.48
CDH3P22223 AC023274.2-201ENST00000445264 521 ntBASIC5.78□□□□□ -1.48
CDH3P22223 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CDH3P22223 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC5.78□□□□□ -1.48
CDH3P22223 AC084754.1-201ENST00000463466 464 ntBASIC5.78□□□□□ -1.48
CDH3P22223 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.78□□□□□ -1.48
CDH3P22223 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC5.78□□□□□ -1.48
CDH3P22223 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CDH3P22223 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.78□□□□□ -1.48
CDH3P22223 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.78□□□□□ -1.48
CDH3P22223 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.78□□□□□ -1.48
CDH3P22223 MIR4776-2-201ENST00000580204 80 ntBASIC5.78□□□□□ -1.48
CDH3P22223 AC010503.3-201ENST00000594355 540 ntBASIC5.78□□□□□ -1.48
CDH3P22223 AL353729.2-201ENST00000605859 1249 ntBASIC5.78□□□□□ -1.48
CDH3P22223 AL451049.1-201ENST00000608672 497 ntBASIC5.78□□□□□ -1.48
CDH3P22223 AC092111.2-201ENST00000611627 1414 ntBASIC5.78□□□□□ -1.48
CDH3P22223 MIR6809-201ENST00000612189 116 ntBASIC5.78□□□□□ -1.48
CDH3P22223 AC015660.5-201ENST00000623238 564 ntBASIC5.78□□□□□ -1.48
CDH3P22223 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.78□□□□□ -1.48
CDH3P22223 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.78□□□□□ -1.48
CDH3P22223 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.78□□□□□ -1.48
CDH3P22223 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CDH3P22223 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
CDH3P22223 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.48
CDH3P22223 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.48
CDH3P22223 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
CDH3P22223 AC006484.1-201ENST00000435086 1884 ntBASIC5.77□□□□□ -1.49
CDH3P22223 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
CDH3P22223 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
CDH3P22223 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
CDH3P22223 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.77□□□□□ -1.49
CDH3P22223 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CDH3P22223 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CDH3P22223 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CDH3P22223 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.77□□□□□ -1.49
CDH3P22223 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.77□□□□□ -1.49
CDH3P22223 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
CDH3P22223 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
CDH3P22223 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC5.77□□□□□ -1.49
CDH3P22223 AC244453.4-201ENST00000419150 388 ntBASIC5.77□□□□□ -1.49
CDH3P22223 BX284632.2-201ENST00000421091 399 ntBASIC5.77□□□□□ -1.49
CDH3P22223 CDY8P-201ENST00000428380 1279 ntBASIC5.77□□□□□ -1.49
CDH3P22223 NPM1P48-201ENST00000436002 853 ntBASIC5.77□□□□□ -1.49
CDH3P22223 NDUFS5P5-201ENST00000437256 321 ntBASIC5.77□□□□□ -1.49
CDH3P22223 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.77□□□□□ -1.49
CDH3P22223 AL512605.1-202ENST00000441919 381 ntBASIC5.77□□□□□ -1.49
CDH3P22223 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
CDH3P22223 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC5.77□□□□□ -1.49
CDH3P22223 AL359955.2-201ENST00000445380 353 ntBASIC5.77□□□□□ -1.49
CDH3P22223 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CDH3P22223 CDY20P-201ENST00000447528 1279 ntBASIC5.77□□□□□ -1.49
CDH3P22223 MTND6P5-201ENST00000448266 512 ntBASIC5.77□□□□□ -1.49
CDH3P22223 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC5.77□□□□□ -1.49
CDH3P22223 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.77□□□□□ -1.49
CDH3P22223 AC104164.1-201ENST00000460282 590 ntBASIC5.77□□□□□ -1.49
CDH3P22223 AC104849.1-201ENST00000462623 405 ntBASIC5.77□□□□□ -1.49
CDH3P22223 RN7SL269P-201ENST00000467795 305 ntBASIC5.77□□□□□ -1.49
CDH3P22223 AC023245.1-201ENST00000468501 517 ntBASIC5.77□□□□□ -1.49
CDH3P22223 AL122020.1-201ENST00000472287 459 ntBASIC5.77□□□□□ -1.49
CDH3P22223 AC124945.1-201ENST00000485133 188 ntBASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms