Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.87□□□□□ -1.47
HLA-DPA1P20036 VN1R21P-201ENST00000426703 765 ntBASIC5.87□□□□□ -1.47
HLA-DPA1P20036 AL590399.2-201ENST00000427536 309 ntBASIC5.87□□□□□ -1.47
HLA-DPA1P20036 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.87□□□□□ -1.47
HLA-DPA1P20036 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.87□□□□□ -1.47
HLA-DPA1P20036 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.87□□□□□ -1.47
HLA-DPA1P20036 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.87□□□□□ -1.47
HLA-DPA1P20036 PDCL3P4-201ENST00000489621 720 ntBASIC5.87□□□□□ -1.47
HLA-DPA1P20036 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HLA-DPA1P20036 AC105384.2-201ENST00000508433 640 ntBASIC5.87□□□□□ -1.47
HLA-DPA1P20036 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.87□□□□□ -1.47
HLA-DPA1P20036 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.87□□□□□ -1.47
HLA-DPA1P20036 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC5.87□□□□□ -1.47
HLA-DPA1P20036 OR5H7P-201ENST00000514084 930 ntBASIC5.87□□□□□ -1.47
HLA-DPA1P20036 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.87□□□□□ -1.47
HLA-DPA1P20036 Y_RNA.667-201ENST00000516212 107 ntBASIC5.87□□□□□ -1.47
HLA-DPA1P20036 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.87□□□□□ -1.47
HLA-DPA1P20036 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.87□□□□□ -1.47
HLA-DPA1P20036 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC5.87□□□□□ -1.47
HLA-DPA1P20036 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HLA-DPA1P20036 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.87□□□□□ -1.47
HLA-DPA1P20036 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC5.87□□□□□ -1.47
HLA-DPA1P20036 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.87□□□□□ -1.47
HLA-DPA1P20036 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HLA-DPA1P20036 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HLA-DPA1P20036 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC5.87□□□□□ -1.47
HLA-DPA1P20036 AP000919.1-201ENST00000582850 985 ntBASIC5.87□□□□□ -1.47
HLA-DPA1P20036 AL513327.3-201ENST00000602618 469 ntBASIC5.87□□□□□ -1.47
HLA-DPA1P20036 NANOGP3-201ENST00000605855 286 ntBASIC5.87□□□□□ -1.47
HLA-DPA1P20036 OR7M1P-201ENST00000608946 533 ntBASIC5.87□□□□□ -1.47
HLA-DPA1P20036 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HLA-DPA1P20036 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.87□□□□□ -1.47
HLA-DPA1P20036 MTCO1P1-201ENST00000624263 1081 ntBASIC5.87□□□□□ -1.47
HLA-DPA1P20036 AC117409.1-201ENST00000470499 1310 ntBASIC5.87□□□□□ -1.47
HLA-DPA1P20036 KYNUP3-201ENST00000574386 1341 ntBASIC5.87□□□□□ -1.47
HLA-DPA1P20036 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HLA-DPA1P20036 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.87□□□□□ -1.47
HLA-DPA1P20036 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
HLA-DPA1P20036 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
HLA-DPA1P20036 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.87□□□□□ -1.47
HLA-DPA1P20036 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
HLA-DPA1P20036 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.87□□□□□ -1.47
HLA-DPA1P20036 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.87□□□□□ -1.47
HLA-DPA1P20036 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
HLA-DPA1P20036 AL034546.1-201ENST00000623740 3693 ntBASIC5.87□□□□□ -1.47
HLA-DPA1P20036 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
HLA-DPA1P20036 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
HLA-DPA1P20036 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
HLA-DPA1P20036 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
HLA-DPA1P20036 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
HLA-DPA1P20036 AP004607.3-201ENST00000530354 3915 ntBASIC5.86□□□□□ -1.47
HLA-DPA1P20036 AL161912.4-201ENST00000623889 2468 ntBASIC5.86□□□□□ -1.47
HLA-DPA1P20036 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.86□□□□□ -1.47
HLA-DPA1P20036 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.86□□□□□ -1.47
HLA-DPA1P20036 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HLA-DPA1P20036 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
HLA-DPA1P20036 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HLA-DPA1P20036 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HLA-DPA1P20036 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC5.86□□□□□ -1.47
HLA-DPA1P20036 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.86□□□□□ -1.47
HLA-DPA1P20036 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
HLA-DPA1P20036 RNU6-1263P-201ENST00000384601 106 ntBASIC5.86□□□□□ -1.47
HLA-DPA1P20036 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.86□□□□□ -1.47
HLA-DPA1P20036 RN7SKP29-201ENST00000410957 272 ntBASIC5.86□□□□□ -1.47
HLA-DPA1P20036 RN7SKP279-201ENST00000411383 298 ntBASIC5.86□□□□□ -1.47
HLA-DPA1P20036 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC5.86□□□□□ -1.47
HLA-DPA1P20036 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HLA-DPA1P20036 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
HLA-DPA1P20036 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC5.86□□□□□ -1.47
HLA-DPA1P20036 NDUFS5P5-201ENST00000437256 321 ntBASIC5.86□□□□□ -1.47
HLA-DPA1P20036 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.86□□□□□ -1.47
HLA-DPA1P20036 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HLA-DPA1P20036 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.86□□□□□ -1.47
HLA-DPA1P20036 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HLA-DPA1P20036 AC093166.4-201ENST00000457867 318 ntBASIC5.86□□□□□ -1.47
HLA-DPA1P20036 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC5.86□□□□□ -1.47
HLA-DPA1P20036 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC5.86□□□□□ -1.47
HLA-DPA1P20036 RNA5SP438-201ENST00000516561 112 ntBASIC5.86□□□□□ -1.47
HLA-DPA1P20036 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC5.86□□□□□ -1.47
HLA-DPA1P20036 AC060775.1-201ENST00000518241 520 ntBASIC5.86□□□□□ -1.47
HLA-DPA1P20036 SUMO2P19-201ENST00000518920 295 ntBASIC5.86□□□□□ -1.47
HLA-DPA1P20036 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5.86□□□□□ -1.47
HLA-DPA1P20036 AP000648.1-201ENST00000529682 397 ntBASIC5.86□□□□□ -1.47
HLA-DPA1P20036 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.86□□□□□ -1.47
HLA-DPA1P20036 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.86□□□□□ -1.47
HLA-DPA1P20036 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC5.86□□□□□ -1.47
HLA-DPA1P20036 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC5.86□□□□□ -1.47
HLA-DPA1P20036 MIR4260-201ENST00000583107 67 ntBASIC5.86□□□□□ -1.47
HLA-DPA1P20036 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.86□□□□□ -1.47
HLA-DPA1P20036 AC060780.2-201ENST00000589047 198 ntBASIC5.86□□□□□ -1.47
HLA-DPA1P20036 AC092944.2-201ENST00000605443 889 ntBASIC5.86□□□□□ -1.47
HLA-DPA1P20036 AL031601.1-201ENST00000605702 394 ntBASIC5.86□□□□□ -1.47
HLA-DPA1P20036 AL096712.1-201ENST00000614561 159 ntBASIC5.86□□□□□ -1.47
HLA-DPA1P20036 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.86□□□□□ -1.47
HLA-DPA1P20036 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.86□□□□□ -1.47
HLA-DPA1P20036 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HLA-DPA1P20036 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
HLA-DPA1P20036 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
HLA-DPA1P20036 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.86□□□□□ -1.47
HLA-DPA1P20036 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms