Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
COL11A1P12107 OR4F13P-202ENST00000560066 2054 ntBASIC6.24□□□□□ -1.41
COL11A1P12107 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
COL11A1P12107 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
COL11A1P12107 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
COL11A1P12107 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
COL11A1P12107 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC6.24□□□□□ -1.41
COL11A1P12107 JPX-212ENST00000639185 9658 ntTSL 5 BASIC6.24□□□□□ -1.41
COL11A1P12107 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
COL11A1P12107 CTNND1-231ENST00000532463 5749 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
COL11A1P12107 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
COL11A1P12107 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
COL11A1P12107 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
COL11A1P12107 RPS26P38-201ENST00000414476 348 ntBASIC6.24□□□□□ -1.41
COL11A1P12107 EI24P4-201ENST00000423683 1078 ntBASIC6.24□□□□□ -1.41
COL11A1P12107 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC6.24□□□□□ -1.41
COL11A1P12107 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.24□□□□□ -1.41
COL11A1P12107 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC6.24□□□□□ -1.41
COL11A1P12107 AC083899.1-201ENST00000454465 3819 ntBASIC6.24□□□□□ -1.41
COL11A1P12107 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC6.24□□□□□ -1.41
COL11A1P12107 RPL35AP28-201ENST00000459730 331 ntBASIC6.24□□□□□ -1.41
COL11A1P12107 RN7SL97P-201ENST00000486780 299 ntBASIC6.24□□□□□ -1.41
COL11A1P12107 SNRPCP2-201ENST00000504370 475 ntBASIC6.24□□□□□ -1.41
COL11A1P12107 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC6.24□□□□□ -1.41
COL11A1P12107 CDH12P4-201ENST00000517835 295 ntBASIC6.24□□□□□ -1.41
COL11A1P12107 CDH12P3-201ENST00000517935 295 ntBASIC6.24□□□□□ -1.41
COL11A1P12107 CDH12P1-201ENST00000518435 295 ntBASIC6.24□□□□□ -1.41
COL11A1P12107 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC6.24□□□□□ -1.41
COL11A1P12107 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC6.24□□□□□ -1.41
COL11A1P12107 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
COL11A1P12107 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC6.24□□□□□ -1.41
COL11A1P12107 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC6.24□□□□□ -1.41
COL11A1P12107 AC073342.3-201ENST00000624211 193 ntBASIC6.24□□□□□ -1.41
COL11A1P12107 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.24□□□□□ -1.41
COL11A1P12107 OR55B1P-203ENST00000641518 2602 ntBASIC6.24□□□□□ -1.41
COL11A1P12107 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC6.24□□□□□ -1.41
COL11A1P12107 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
COL11A1P12107 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
COL11A1P12107 SIPA1L1-202ENST00000381232 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC6.24□□□□□ -1.41
COL11A1P12107 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC6.23□□□□□ -1.41
COL11A1P12107 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
COL11A1P12107 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC6.23□□□□□ -1.41
COL11A1P12107 HSPA8P18-201ENST00000439846 1928 ntBASIC6.23□□□□□ -1.41
COL11A1P12107 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC6.23□□□□□ -1.41
COL11A1P12107 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
COL11A1P12107 RNU1-136P-201ENST00000384181 164 ntBASIC6.23□□□□□ -1.41
COL11A1P12107 AC096921.1-201ENST00000411661 375 ntBASIC6.23□□□□□ -1.41
COL11A1P12107 KRT8P51-201ENST00000438938 274 ntBASIC6.23□□□□□ -1.41
COL11A1P12107 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC6.23□□□□□ -1.41
COL11A1P12107 PDCL3P4-201ENST00000489621 720 ntBASIC6.23□□□□□ -1.41
COL11A1P12107 RPL37AP8-201ENST00000494116 276 ntBASIC6.23□□□□□ -1.41
COL11A1P12107 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC6.23□□□□□ -1.41
COL11A1P12107 AC105420.1-201ENST00000504389 582 ntBASIC6.23□□□□□ -1.41
COL11A1P12107 AC108043.1-201ENST00000512696 574 ntBASIC6.23□□□□□ -1.41
COL11A1P12107 EIF4A2P5-201ENST00000529914 499 ntBASIC6.23□□□□□ -1.41
COL11A1P12107 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.23□□□□□ -1.41
COL11A1P12107 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.23□□□□□ -1.41
COL11A1P12107 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
COL11A1P12107 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC6.23□□□□□ -1.41
COL11A1P12107 AC010245.2-201ENST00000606908 1167 ntBASIC6.23□□□□□ -1.41
COL11A1P12107 WWOX-217ENST00000620008 450 ntTSL 2 BASIC6.23□□□□□ -1.41
COL11A1P12107 AP002799.1-201ENST00000623552 423 ntBASIC6.23□□□□□ -1.41
COL11A1P12107 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
COL11A1P12107 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
COL11A1P12107 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC6.23□□□□□ -1.41
COL11A1P12107 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
COL11A1P12107 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC6.23□□□□□ -1.41
COL11A1P12107 MRRFP1-201ENST00000435941 1675 ntBASIC6.23□□□□□ -1.41
COL11A1P12107 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
COL11A1P12107 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC6.23□□□□□ -1.41
COL11A1P12107 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
COL11A1P12107 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
COL11A1P12107 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC6.22□□□□□ -1.41
COL11A1P12107 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
COL11A1P12107 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC6.22□□□□□ -1.41
COL11A1P12107 PA2G4P6-201ENST00000438325 1197 ntBASIC6.22□□□□□ -1.41
COL11A1P12107 AC092647.2-201ENST00000452998 253 ntBASIC6.22□□□□□ -1.41
COL11A1P12107 HIGD1AP8-201ENST00000453927 274 ntBASIC6.22□□□□□ -1.41
COL11A1P12107 RPS18P6-201ENST00000476880 458 ntBASIC6.22□□□□□ -1.41
COL11A1P12107 AC090114.3-201ENST00000479267 829 ntBASIC6.22□□□□□ -1.41
COL11A1P12107 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
COL11A1P12107 RNA5SP373-201ENST00000517271 95 ntBASIC6.22□□□□□ -1.41
COL11A1P12107 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC6.22□□□□□ -1.41
COL11A1P12107 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
COL11A1P12107 AL390726.5-202ENST00000564800 256 ntBASIC6.22□□□□□ -1.41
COL11A1P12107 AC114947.2-201ENST00000565748 2125 ntBASIC6.22□□□□□ -1.41
COL11A1P12107 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC6.22□□□□□ -1.41
COL11A1P12107 AC087763.1-201ENST00000603391 286 ntBASIC6.22□□□□□ -1.41
COL11A1P12107 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
COL11A1P12107 AC090607.5-201ENST00000615692 224 ntBASIC6.22□□□□□ -1.41
COL11A1P12107 CCL14-204ENST00000622526 472 ntTSL 3 BASIC6.22□□□□□ -1.41
COL11A1P12107 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
COL11A1P12107 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
COL11A1P12107 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
COL11A1P12107 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
COL11A1P12107 KIAA0100-201ENST00000389003 6852 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
COL11A1P12107 KIAA0100-203ENST00000544884 6856 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
COL11A1P12107 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
COL11A1P12107 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC6.22□□□□□ -1.41
COL11A1P12107 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms