Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 AC025588.4-201ENST00000615802 908 ntBASIC8.82□□□□□ -1
CSB-PGBD3P0DP91 MIR6811-201ENST00000620409 58 ntBASIC8.82□□□□□ -1
CSB-PGBD3P0DP91 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC8.82□□□□□ -1
CSB-PGBD3P0DP91 CASC19-246ENST00000641625 1606 ntBASIC8.82□□□□□ -1
CSB-PGBD3P0DP91 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC8.82□□□□□ -1
CSB-PGBD3P0DP91 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
CSB-PGBD3P0DP91 CASP12-212ENST00000613512 1451 ntAPPRIS P5 TSL 1 (best) BASIC8.82□□□□□ -1
CSB-PGBD3P0DP91 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC8.82□□□□□ -1
CSB-PGBD3P0DP91 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC8.82□□□□□ -1
CSB-PGBD3P0DP91 ASB8-201ENST00000317697 2615 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
CSB-PGBD3P0DP91 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
CSB-PGBD3P0DP91 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC8.82□□□□□ -1
CSB-PGBD3P0DP91 DCAF13-210ENST00000618975 2038 ntTSL 2 BASIC8.81□□□□□ -1
CSB-PGBD3P0DP91 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC8.81□□□□□ -1
CSB-PGBD3P0DP91 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
CSB-PGBD3P0DP91 MEIS1-202ENST00000398506 3530 ntTSL 5 BASIC8.81□□□□□ -1
CSB-PGBD3P0DP91 HSPD1P7-201ENST00000447985 1686 ntBASIC8.81□□□□□ -1
CSB-PGBD3P0DP91 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC8.81□□□□□ -1
CSB-PGBD3P0DP91 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
CSB-PGBD3P0DP91 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC8.81□□□□□ -1
CSB-PGBD3P0DP91 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC8.81□□□□□ -1
CSB-PGBD3P0DP91 PIRT-201ENST00000580256 3810 ntAPPRIS P1 TSL 2 BASIC8.81□□□□□ -1
CSB-PGBD3P0DP91 AC104454.1-201ENST00000421341 1401 ntBASIC8.81□□□□□ -1
CSB-PGBD3P0DP91 POMP-202ENST00000460403 1428 ntTSL 3 BASIC8.81□□□□□ -1
CSB-PGBD3P0DP91 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
CSB-PGBD3P0DP91 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC8.81□□□□□ -1
CSB-PGBD3P0DP91 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC8.81□□□□□ -1
CSB-PGBD3P0DP91 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
CSB-PGBD3P0DP91 AL355306.2-202ENST00000634380 2281 ntTSL 5 BASIC8.81□□□□□ -1
CSB-PGBD3P0DP91 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
CSB-PGBD3P0DP91 RNU4-68P-201ENST00000364314 141 ntBASIC8.81□□□□□ -1
CSB-PGBD3P0DP91 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC8.81□□□□□ -1
CSB-PGBD3P0DP91 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC8.81□□□□□ -1
CSB-PGBD3P0DP91 RNU6-1242P-201ENST00000391052 103 ntBASIC8.81□□□□□ -1
CSB-PGBD3P0DP91 CD209-205ENST00000394161 507 ntTSL 1 (best) BASIC8.81□□□□□ -1
CSB-PGBD3P0DP91 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC8.81□□□□□ -1
CSB-PGBD3P0DP91 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC8.81□□□□□ -1
CSB-PGBD3P0DP91 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC8.81□□□□□ -1
CSB-PGBD3P0DP91 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC8.81□□□□□ -1
CSB-PGBD3P0DP91 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC8.81□□□□□ -1
CSB-PGBD3P0DP91 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC8.81□□□□□ -1
CSB-PGBD3P0DP91 AP002453.1-201ENST00000492327 668 ntBASIC8.81□□□□□ -1
CSB-PGBD3P0DP91 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC8.81□□□□□ -1
CSB-PGBD3P0DP91 AC008429.2-201ENST00000523057 864 ntBASIC8.81□□□□□ -1
CSB-PGBD3P0DP91 AC079064.1-201ENST00000528365 362 ntBASIC8.81□□□□□ -1
CSB-PGBD3P0DP91 AC023050.2-201ENST00000544968 387 ntBASIC8.81□□□□□ -1
CSB-PGBD3P0DP91 MED21-206ENST00000546323 575 ntTSL 3 BASIC8.81□□□□□ -1
CSB-PGBD3P0DP91 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC8.81□□□□□ -1
CSB-PGBD3P0DP91 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC8.81□□□□□ -1
CSB-PGBD3P0DP91 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC8.81□□□□□ -1
CSB-PGBD3P0DP91 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC8.81□□□□□ -1
CSB-PGBD3P0DP91 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC8.81□□□□□ -1
CSB-PGBD3P0DP91 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC8.81□□□□□ -1
CSB-PGBD3P0DP91 SUMO2P14-201ENST00000604488 293 ntBASIC8.81□□□□□ -1
CSB-PGBD3P0DP91 AC079610.2-201ENST00000604818 690 ntBASIC8.81□□□□□ -1
CSB-PGBD3P0DP91 AL359513.1-201ENST00000614364 557 ntBASIC8.81□□□□□ -1
CSB-PGBD3P0DP91 AL390318.1-201ENST00000624564 687 ntBASIC8.81□□□□□ -1
CSB-PGBD3P0DP91 SNX18P12-201ENST00000624821 759 ntBASIC8.81□□□□□ -1
CSB-PGBD3P0DP91 UGP2-232ENST00000640075 567 ntTSL 5 BASIC8.81□□□□□ -1
CSB-PGBD3P0DP91 AL596275.2-203ENST00000641951 371 ntBASIC8.81□□□□□ -1
CSB-PGBD3P0DP91 AL137918.1-201ENST00000624542 1922 ntBASIC8.81□□□□□ -1
CSB-PGBD3P0DP91 ZNF876P-202ENST00000398732 1485 ntBASIC8.81□□□□□ -1
CSB-PGBD3P0DP91 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
CSB-PGBD3P0DP91 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
CSB-PGBD3P0DP91 ATR-201ENST00000350721 8249 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
CSB-PGBD3P0DP91 LINC01788-201ENST00000419450 2086 ntTSL 1 (best) BASIC8.81□□□□□ -1
CSB-PGBD3P0DP91 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC8.8□□□□□ -1
CSB-PGBD3P0DP91 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
CSB-PGBD3P0DP91 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
CSB-PGBD3P0DP91 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC8.8□□□□□ -1
CSB-PGBD3P0DP91 ACSL5-201ENST00000354273 3353 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
CSB-PGBD3P0DP91 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC8.8□□□□□ -1
CSB-PGBD3P0DP91 CDH17-202ENST00000441892 2204 ntTSL 2 BASIC8.8□□□□□ -1
CSB-PGBD3P0DP91 MEPE-204ENST00000497649 2226 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
CSB-PGBD3P0DP91 SPARCL1-201ENST00000282470 2906 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
CSB-PGBD3P0DP91 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
CSB-PGBD3P0DP91 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC8.8□□□□□ -1
CSB-PGBD3P0DP91 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
CSB-PGBD3P0DP91 AL356968.2-201ENST00000412769 1257 ntBASIC8.8□□□□□ -1
CSB-PGBD3P0DP91 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC8.8□□□□□ -1
CSB-PGBD3P0DP91 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC8.8□□□□□ -1
CSB-PGBD3P0DP91 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC8.8□□□□□ -1
CSB-PGBD3P0DP91 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC8.8□□□□□ -1
CSB-PGBD3P0DP91 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC8.8□□□□□ -1
CSB-PGBD3P0DP91 GTF2IP3-201ENST00000433887 494 ntBASIC8.8□□□□□ -1
CSB-PGBD3P0DP91 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC8.8□□□□□ -1
CSB-PGBD3P0DP91 AL359385.1-201ENST00000456509 365 ntBASIC8.8□□□□□ -1
CSB-PGBD3P0DP91 AC009963.3-201ENST00000458090 486 ntBASIC8.8□□□□□ -1
CSB-PGBD3P0DP91 RN7SL870P-201ENST00000460111 296 ntBASIC8.8□□□□□ -1
CSB-PGBD3P0DP91 AC104689.1-201ENST00000473356 768 ntBASIC8.8□□□□□ -1
CSB-PGBD3P0DP91 RPS27AP16-201ENST00000492222 470 ntBASIC8.8□□□□□ -1
CSB-PGBD3P0DP91 H3F3AP3-201ENST00000497682 407 ntBASIC8.8□□□□□ -1
CSB-PGBD3P0DP91 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC8.8□□□□□ -1
CSB-PGBD3P0DP91 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC8.8□□□□□ -1
CSB-PGBD3P0DP91 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC8.8□□□□□ -1
CSB-PGBD3P0DP91 AL133399.1-201ENST00000527476 298 ntBASIC8.8□□□□□ -1
CSB-PGBD3P0DP91 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC8.8□□□□□ -1
CSB-PGBD3P0DP91 EEF1B2P4-201ENST00000551398 348 ntBASIC8.8□□□□□ -1
CSB-PGBD3P0DP91 AL049830.4-201ENST00000555149 351 ntBASIC8.8□□□□□ -1
CSB-PGBD3P0DP91 AC234778.2-201ENST00000566241 354 ntBASIC8.8□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms