Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
RAB40ALP0C0E4 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
RAB40ALP0C0E4 MIR7-1-201ENST00000384871 110 ntBASIC5.58□□□□□ -1.52
RAB40ALP0C0E4 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
RAB40ALP0C0E4 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC5.58□□□□□ -1.52
RAB40ALP0C0E4 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.58□□□□□ -1.52
RAB40ALP0C0E4 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.58□□□□□ -1.52
RAB40ALP0C0E4 FAM204CP-201ENST00000424489 642 ntBASIC5.58□□□□□ -1.52
RAB40ALP0C0E4 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.58□□□□□ -1.52
RAB40ALP0C0E4 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
RAB40ALP0C0E4 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.58□□□□□ -1.52
RAB40ALP0C0E4 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.58□□□□□ -1.52
RAB40ALP0C0E4 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.58□□□□□ -1.52
RAB40ALP0C0E4 YWHAEP1-201ENST00000453697 763 ntBASIC5.58□□□□□ -1.52
RAB40ALP0C0E4 AC112187.1-201ENST00000455837 479 ntBASIC5.58□□□□□ -1.52
RAB40ALP0C0E4 AL445687.2-201ENST00000458156 728 ntBASIC5.58□□□□□ -1.52
RAB40ALP0C0E4 snoU13.29-201ENST00000459370 104 ntBASIC5.58□□□□□ -1.52
RAB40ALP0C0E4 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RAB40ALP0C0E4 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RAB40ALP0C0E4 AC090058.1-201ENST00000498788 435 ntBASIC5.58□□□□□ -1.52
RAB40ALP0C0E4 TPM3P3-201ENST00000521343 354 ntBASIC5.58□□□□□ -1.52
RAB40ALP0C0E4 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC5.58□□□□□ -1.52
RAB40ALP0C0E4 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.58□□□□□ -1.52
RAB40ALP0C0E4 AC022404.1-201ENST00000555320 273 ntBASIC5.58□□□□□ -1.52
RAB40ALP0C0E4 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.58□□□□□ -1.52
RAB40ALP0C0E4 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC5.58□□□□□ -1.52
RAB40ALP0C0E4 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.58□□□□□ -1.52
RAB40ALP0C0E4 AC145423.1-201ENST00000605712 336 ntBASIC5.58□□□□□ -1.52
RAB40ALP0C0E4 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC5.58□□□□□ -1.52
RAB40ALP0C0E4 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC5.58□□□□□ -1.52
RAB40ALP0C0E4 AC241377.1-201ENST00000619797 406 ntBASIC5.58□□□□□ -1.52
RAB40ALP0C0E4 AL049767.1-202ENST00000637826 242 ntBASIC5.58□□□□□ -1.52
RAB40ALP0C0E4 AL591135.1-201ENST00000401578 5914 ntBASIC5.58□□□□□ -1.52
RAB40ALP0C0E4 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
RAB40ALP0C0E4 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.58□□□□□ -1.52
RAB40ALP0C0E4 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC5.58□□□□□ -1.52
RAB40ALP0C0E4 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC5.58□□□□□ -1.52
RAB40ALP0C0E4 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
RAB40ALP0C0E4 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC5.58□□□□□ -1.52
RAB40ALP0C0E4 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RAB40ALP0C0E4 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.58□□□□□ -1.52
RAB40ALP0C0E4 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RAB40ALP0C0E4 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC5.58□□□□□ -1.52
RAB40ALP0C0E4 AC005725.1-201ENST00000577346 2607 ntBASIC5.58□□□□□ -1.52
RAB40ALP0C0E4 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.58□□□□□ -1.52
RAB40ALP0C0E4 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.58□□□□□ -1.52
RAB40ALP0C0E4 NCOA4P2-201ENST00000340589 1813 ntBASIC5.58□□□□□ -1.52
RAB40ALP0C0E4 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
RAB40ALP0C0E4 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.57□□□□□ -1.52
RAB40ALP0C0E4 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RAB40ALP0C0E4 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RAB40ALP0C0E4 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
RAB40ALP0C0E4 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.57□□□□□ -1.52
RAB40ALP0C0E4 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
RAB40ALP0C0E4 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RAB40ALP0C0E4 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC5.57□□□□□ -1.52
RAB40ALP0C0E4 RNU6-618P-201ENST00000363518 112 ntBASIC5.57□□□□□ -1.52
RAB40ALP0C0E4 MYL6P5-201ENST00000412707 459 ntBASIC5.57□□□□□ -1.52
RAB40ALP0C0E4 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.57□□□□□ -1.52
RAB40ALP0C0E4 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC5.57□□□□□ -1.52
RAB40ALP0C0E4 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.57□□□□□ -1.52
RAB40ALP0C0E4 AC006455.6-201ENST00000426192 893 ntBASIC5.57□□□□□ -1.52
RAB40ALP0C0E4 AC099677.3-201ENST00000427081 395 ntBASIC5.57□□□□□ -1.52
RAB40ALP0C0E4 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.57□□□□□ -1.52
RAB40ALP0C0E4 AC007688.1-201ENST00000475592 759 ntBASIC5.57□□□□□ -1.52
RAB40ALP0C0E4 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RAB40ALP0C0E4 CCDC11P1-201ENST00000503137 1162 ntBASIC5.57□□□□□ -1.52
RAB40ALP0C0E4 AC105420.1-201ENST00000504389 582 ntBASIC5.57□□□□□ -1.52
RAB40ALP0C0E4 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC5.57□□□□□ -1.52
RAB40ALP0C0E4 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC5.57□□□□□ -1.52
RAB40ALP0C0E4 RPL7L1P4-201ENST00000513004 707 ntBASIC5.57□□□□□ -1.52
RAB40ALP0C0E4 CYP4F27P-201ENST00000514557 494 ntBASIC5.57□□□□□ -1.52
RAB40ALP0C0E4 AC117525.1-201ENST00000515228 503 ntBASIC5.57□□□□□ -1.52
RAB40ALP0C0E4 RFPL4AP3-201ENST00000515267 345 ntBASIC5.57□□□□□ -1.52
RAB40ALP0C0E4 AC008429.4-201ENST00000521201 182 ntBASIC5.57□□□□□ -1.52
RAB40ALP0C0E4 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC5.57□□□□□ -1.52
RAB40ALP0C0E4 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.57□□□□□ -1.52
RAB40ALP0C0E4 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.57□□□□□ -1.52
RAB40ALP0C0E4 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.57□□□□□ -1.52
RAB40ALP0C0E4 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RAB40ALP0C0E4 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.57□□□□□ -1.52
RAB40ALP0C0E4 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.57□□□□□ -1.52
RAB40ALP0C0E4 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.57□□□□□ -1.52
RAB40ALP0C0E4 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RAB40ALP0C0E4 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.57□□□□□ -1.52
RAB40ALP0C0E4 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.57□□□□□ -1.52
RAB40ALP0C0E4 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.57□□□□□ -1.52
RAB40ALP0C0E4 PARP4P2-201ENST00000446672 3326 ntBASIC5.57□□□□□ -1.52
RAB40ALP0C0E4 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC5.57□□□□□ -1.52
RAB40ALP0C0E4 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
RAB40ALP0C0E4 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RAB40ALP0C0E4 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
RAB40ALP0C0E4 AC093297.3-201ENST00000607056 2517 ntBASIC5.56□□□□□ -1.52
RAB40ALP0C0E4 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RAB40ALP0C0E4 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.56□□□□□ -1.52
RAB40ALP0C0E4 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RAB40ALP0C0E4 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RAB40ALP0C0E4 RNU6-670P-201ENST00000364312 104 ntBASIC5.56□□□□□ -1.52
RAB40ALP0C0E4 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.56□□□□□ -1.52
RAB40ALP0C0E4 RNU11-201ENST00000387069 134 ntBASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms