Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC7.43□□□□□ -1.22
HMGB1P09429 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC7.43□□□□□ -1.22
HMGB1P09429 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC7.43□□□□□ -1.22
HMGB1P09429 AC007562.1-201ENST00000421819 517 ntBASIC7.43□□□□□ -1.22
HMGB1P09429 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC7.43□□□□□ -1.22
HMGB1P09429 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC7.43□□□□□ -1.22
HMGB1P09429 MORF4L1P7-201ENST00000426038 703 ntBASIC7.43□□□□□ -1.22
HMGB1P09429 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
HMGB1P09429 NPM1P24-201ENST00000428039 894 ntBASIC7.43□□□□□ -1.22
HMGB1P09429 MTATP6P11-201ENST00000428071 670 ntBASIC7.43□□□□□ -1.22
HMGB1P09429 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC7.43□□□□□ -1.22
HMGB1P09429 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC7.43□□□□□ -1.22
HMGB1P09429 AC064862.5-201ENST00000440618 334 ntBASIC7.43□□□□□ -1.22
HMGB1P09429 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC7.43□□□□□ -1.22
HMGB1P09429 AC023274.2-201ENST00000445264 521 ntBASIC7.43□□□□□ -1.22
HMGB1P09429 RPL7L1P3-201ENST00000455249 689 ntBASIC7.43□□□□□ -1.22
HMGB1P09429 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC7.43□□□□□ -1.22
HMGB1P09429 RBMY2HP-201ENST00000457961 720 ntBASIC7.43□□□□□ -1.22
HMGB1P09429 RPS20P4-201ENST00000461659 355 ntBASIC7.43□□□□□ -1.22
HMGB1P09429 RN7SL39P-201ENST00000462264 297 ntBASIC7.43□□□□□ -1.22
HMGB1P09429 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC7.43□□□□□ -1.22
HMGB1P09429 UCK2-205ENST00000469256 753 ntTSL 3 BASIC7.43□□□□□ -1.22
HMGB1P09429 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC7.43□□□□□ -1.22
HMGB1P09429 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC7.43□□□□□ -1.22
HMGB1P09429 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
HMGB1P09429 AC010468.3-201ENST00000508225 458 ntBASIC7.43□□□□□ -1.22
HMGB1P09429 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC7.43□□□□□ -1.22
HMGB1P09429 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC7.43□□□□□ -1.22
HMGB1P09429 AC134349.2-201ENST00000535136 910 ntBASIC7.43□□□□□ -1.22
HMGB1P09429 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC7.43□□□□□ -1.22
HMGB1P09429 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC7.43□□□□□ -1.22
HMGB1P09429 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC7.43□□□□□ -1.22
HMGB1P09429 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC7.43□□□□□ -1.22
HMGB1P09429 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC7.43□□□□□ -1.22
HMGB1P09429 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC7.43□□□□□ -1.22
HMGB1P09429 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC7.43□□□□□ -1.22
HMGB1P09429 AL352984.2-202ENST00000613699 155 ntBASIC7.43□□□□□ -1.22
HMGB1P09429 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC7.43□□□□□ -1.22
HMGB1P09429 AL138693.1-201ENST00000622219 129 ntBASIC7.43□□□□□ -1.22
HMGB1P09429 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC7.43□□□□□ -1.22
HMGB1P09429 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
HMGB1P09429 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
HMGB1P09429 CCNT2P1-201ENST00000423082 1315 ntBASIC7.43□□□□□ -1.22
HMGB1P09429 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
HMGB1P09429 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
HMGB1P09429 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
HMGB1P09429 OFD1P15Y-201ENST00000411536 1392 ntBASIC7.43□□□□□ -1.22
HMGB1P09429 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
HMGB1P09429 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC7.43□□□□□ -1.22
HMGB1P09429 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
HMGB1P09429 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC7.43□□□□□ -1.22
HMGB1P09429 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
HMGB1P09429 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
HMGB1P09429 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC7.42□□□□□ -1.22
HMGB1P09429 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC7.42□□□□□ -1.22
HMGB1P09429 MRRFP1-201ENST00000435941 1675 ntBASIC7.42□□□□□ -1.22
HMGB1P09429 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
HMGB1P09429 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
HMGB1P09429 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC7.42□□□□□ -1.22
HMGB1P09429 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
HMGB1P09429 RNA5SP251-201ENST00000410614 137 ntBASIC7.42□□□□□ -1.22
HMGB1P09429 TATDN1P1-201ENST00000414123 891 ntBASIC7.42□□□□□ -1.22
HMGB1P09429 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC7.42□□□□□ -1.22
HMGB1P09429 RPL12P28-201ENST00000430852 489 ntBASIC7.42□□□□□ -1.22
HMGB1P09429 AL590762.3-201ENST00000436372 640 ntBASIC7.42□□□□□ -1.22
HMGB1P09429 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC7.42□□□□□ -1.22
HMGB1P09429 COX4I1P2-201ENST00000447446 547 ntBASIC7.42□□□□□ -1.22
HMGB1P09429 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC7.42□□□□□ -1.22
HMGB1P09429 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
HMGB1P09429 AL022319.1-201ENST00000458183 1167 ntBASIC7.42□□□□□ -1.22
HMGB1P09429 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC7.42□□□□□ -1.22
HMGB1P09429 AC104687.1-201ENST00000485829 412 ntBASIC7.42□□□□□ -1.22
HMGB1P09429 AC111193.1-201ENST00000504097 155 ntBASIC7.42□□□□□ -1.22
HMGB1P09429 OR4D12P-201ENST00000509361 911 ntBASIC7.42□□□□□ -1.22
HMGB1P09429 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC7.42□□□□□ -1.22
HMGB1P09429 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC7.42□□□□□ -1.22
HMGB1P09429 SNORA74.1-201ENST00000516320 180 ntBASIC7.42□□□□□ -1.22
HMGB1P09429 GLYAT-203ENST00000529732 1070 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
HMGB1P09429 OR6M2P-201ENST00000529831 871 ntBASIC7.42□□□□□ -1.22
HMGB1P09429 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC7.42□□□□□ -1.22
HMGB1P09429 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC7.42□□□□□ -1.22
HMGB1P09429 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC7.42□□□□□ -1.22
HMGB1P09429 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC7.42□□□□□ -1.22
HMGB1P09429 NPIPB1P-202ENST00000588786 828 ntBASIC7.42□□□□□ -1.22
HMGB1P09429 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC7.42□□□□□ -1.22
HMGB1P09429 ZNF92P3-201ENST00000596594 954 ntBASIC7.42□□□□□ -1.22
HMGB1P09429 AC020923.1-201ENST00000624021 917 ntBASIC7.42□□□□□ -1.22
HMGB1P09429 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
HMGB1P09429 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
HMGB1P09429 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
HMGB1P09429 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC7.42□□□□□ -1.22
HMGB1P09429 AC009229.4-201ENST00000623854 1947 ntBASIC7.42□□□□□ -1.22
HMGB1P09429 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
HMGB1P09429 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
HMGB1P09429 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
HMGB1P09429 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC7.42□□□□□ -1.22
HMGB1P09429 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC7.42□□□□□ -1.22
HMGB1P09429 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC7.42□□□□□ -1.22
HMGB1P09429 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC7.41□□□□□ -1.22
HMGB1P09429 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms