Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 EIF1P7-201ENST00000487533 337 ntBASIC6.26□□□□□ -1.41
RB1P06400 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC6.26□□□□□ -1.41
RB1P06400 RN7SL547P-201ENST00000490793 290 ntBASIC6.26□□□□□ -1.41
RB1P06400 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC6.26□□□□□ -1.41
RB1P06400 FTH1P8-201ENST00000498161 514 ntBASIC6.26□□□□□ -1.41
RB1P06400 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC6.26□□□□□ -1.41
RB1P06400 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC6.26□□□□□ -1.41
RB1P06400 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC6.26□□□□□ -1.41
RB1P06400 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC6.26□□□□□ -1.41
RB1P06400 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC6.26□□□□□ -1.41
RB1P06400 SUMO2P19-201ENST00000518920 295 ntBASIC6.26□□□□□ -1.41
RB1P06400 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC6.26□□□□□ -1.41
RB1P06400 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC6.26□□□□□ -1.41
RB1P06400 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC6.26□□□□□ -1.41
RB1P06400 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC6.26□□□□□ -1.41
RB1P06400 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC6.26□□□□□ -1.41
RB1P06400 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC6.26□□□□□ -1.41
RB1P06400 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC6.26□□□□□ -1.41
RB1P06400 AL353729.2-201ENST00000605859 1249 ntBASIC6.26□□□□□ -1.41
RB1P06400 AL133406.3-201ENST00000606817 541 ntBASIC6.26□□□□□ -1.41
RB1P06400 AC010245.2-201ENST00000606908 1167 ntBASIC6.26□□□□□ -1.41
RB1P06400 AL021368.3-201ENST00000607119 578 ntBASIC6.26□□□□□ -1.41
RB1P06400 AL512329.2-201ENST00000607350 548 ntBASIC6.26□□□□□ -1.41
RB1P06400 AC117490.2-201ENST00000610042 594 ntBASIC6.26□□□□□ -1.41
RB1P06400 AL359513.1-201ENST00000614364 557 ntBASIC6.26□□□□□ -1.41
RB1P06400 MIR8080-201ENST00000622224 89 ntBASIC6.26□□□□□ -1.41
RB1P06400 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
RB1P06400 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
RB1P06400 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
RB1P06400 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC6.26□□□□□ -1.41
RB1P06400 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.26□□□□□ -1.41
RB1P06400 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.26□□□□□ -1.41
RB1P06400 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
RB1P06400 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
RB1P06400 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
RB1P06400 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.26□□□□□ -1.41
RB1P06400 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
RB1P06400 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC6.25□□□□□ -1.41
RB1P06400 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
RB1P06400 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC6.25□□□□□ -1.41
RB1P06400 AC112243.1-201ENST00000623949 3851 ntBASIC6.25□□□□□ -1.41
RB1P06400 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
RB1P06400 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC6.25□□□□□ -1.41
RB1P06400 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC6.25□□□□□ -1.41
RB1P06400 MIR223-201ENST00000385204 110 ntBASIC6.25□□□□□ -1.41
RB1P06400 MYL6P5-201ENST00000412707 459 ntBASIC6.25□□□□□ -1.41
RB1P06400 RPL12P43-201ENST00000420608 499 ntBASIC6.25□□□□□ -1.41
RB1P06400 EIF4A1P7-201ENST00000421800 1220 ntBASIC6.25□□□□□ -1.41
RB1P06400 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC6.25□□□□□ -1.41
RB1P06400 AL022237.1-201ENST00000446663 358 ntBASIC6.25□□□□□ -1.41
RB1P06400 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC6.25□□□□□ -1.41
RB1P06400 RPS27AP3-201ENST00000453803 454 ntBASIC6.25□□□□□ -1.41
RB1P06400 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC6.25□□□□□ -1.41
RB1P06400 AC100832.1-201ENST00000471945 383 ntBASIC6.25□□□□□ -1.41
RB1P06400 OARD1-211ENST00000480585 829 ntTSL 3 BASIC6.25□□□□□ -1.41
RB1P06400 PPP1R11P1-201ENST00000486095 376 ntBASIC6.25□□□□□ -1.41
RB1P06400 NDUFA5P12-201ENST00000503796 343 ntBASIC6.25□□□□□ -1.41
RB1P06400 CDC42P3-201ENST00000518493 633 ntBASIC6.25□□□□□ -1.41
RB1P06400 MRPS16P1-201ENST00000523462 412 ntBASIC6.25□□□□□ -1.41
RB1P06400 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC6.25□□□□□ -1.41
RB1P06400 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC6.25□□□□□ -1.41
RB1P06400 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
RB1P06400 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
RB1P06400 AC011369.2-201ENST00000624423 1567 ntBASIC6.25□□□□□ -1.41
RB1P06400 CUL4AP1-201ENST00000514750 1863 ntBASIC6.25□□□□□ -1.41
RB1P06400 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6.25□□□□□ -1.41
RB1P06400 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
RB1P06400 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC6.25□□□□□ -1.41
RB1P06400 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
RB1P06400 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.25□□□□□ -1.41
RB1P06400 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
RB1P06400 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.25□□□□□ -1.41
RB1P06400 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
RB1P06400 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
RB1P06400 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
RB1P06400 AC008957.3-201ENST00000624112 2242 ntBASIC6.25□□□□□ -1.41
RB1P06400 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC6.25□□□□□ -1.41
RB1P06400 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.25□□□□□ -1.41
RB1P06400 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
RB1P06400 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC6.24□□□□□ -1.41
RB1P06400 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.24□□□□□ -1.41
RB1P06400 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
RB1P06400 FTO-215ENST00000636491 1676 ntTSL 5 BASIC6.24□□□□□ -1.41
RB1P06400 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC6.24□□□□□ -1.41
RB1P06400 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC6.24□□□□□ -1.41
RB1P06400 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.24□□□□□ -1.41
RB1P06400 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
RB1P06400 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
RB1P06400 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
RB1P06400 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
RB1P06400 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
RB1P06400 RNA5SP211-201ENST00000365516 117 ntBASIC6.24□□□□□ -1.41
RB1P06400 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC6.24□□□□□ -1.41
RB1P06400 RNU6-891P-201ENST00000384280 111 ntBASIC6.24□□□□□ -1.41
RB1P06400 AL645927.1-201ENST00000396783 406 ntBASIC6.24□□□□□ -1.41
RB1P06400 AL133270.1-201ENST00000402635 279 ntBASIC6.24□□□□□ -1.41
RB1P06400 GAPDHP42-201ENST00000406848 981 ntBASIC6.24□□□□□ -1.41
RB1P06400 HMGA1P8-201ENST00000414130 321 ntBASIC6.24□□□□□ -1.41
RB1P06400 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC6.24□□□□□ -1.41
RB1P06400 SDC4P-201ENST00000453285 601 ntBASIC6.24□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms