Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AC091685.2-201ENST00000454924 864 ntBASIC6.7□□□□□ -1.34
COL1A1P02452 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC6.7□□□□□ -1.34
COL1A1P02452 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
COL1A1P02452 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC6.7□□□□□ -1.34
COL1A1P02452 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC6.7□□□□□ -1.34
COL1A1P02452 NANOGP3-201ENST00000605855 286 ntBASIC6.7□□□□□ -1.34
COL1A1P02452 AL133481.2-203ENST00000607558 139 ntBASIC6.7□□□□□ -1.34
COL1A1P02452 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC6.7□□□□□ -1.34
COL1A1P02452 UGP2-232ENST00000640075 567 ntTSL 5 BASIC6.7□□□□□ -1.34
COL1A1P02452 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC6.7□□□□□ -1.34
COL1A1P02452 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC6.7□□□□□ -1.34
COL1A1P02452 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
COL1A1P02452 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
COL1A1P02452 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
COL1A1P02452 PLXNC1-205ENST00000547057 2455 ntTSL 2 BASIC6.7□□□□□ -1.34
COL1A1P02452 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.7□□□□□ -1.34
COL1A1P02452 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
COL1A1P02452 AC018809.2-201ENST00000602436 3823 ntBASIC6.7□□□□□ -1.34
COL1A1P02452 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
COL1A1P02452 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC6.69□□□□□ -1.34
COL1A1P02452 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.69□□□□□ -1.34
COL1A1P02452 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC6.69□□□□□ -1.34
COL1A1P02452 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
COL1A1P02452 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
COL1A1P02452 RNU1-106P-201ENST00000384382 164 ntBASIC6.69□□□□□ -1.34
COL1A1P02452 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC6.69□□□□□ -1.34
COL1A1P02452 RBMY2KP-201ENST00000418221 992 ntBASIC6.69□□□□□ -1.34
COL1A1P02452 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC6.69□□□□□ -1.34
COL1A1P02452 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC6.69□□□□□ -1.34
COL1A1P02452 KRT8P51-201ENST00000438938 274 ntBASIC6.69□□□□□ -1.34
COL1A1P02452 NANOGP9-201ENST00000439890 892 ntBASIC6.69□□□□□ -1.34
COL1A1P02452 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC6.69□□□□□ -1.34
COL1A1P02452 AL596266.1-201ENST00000448132 400 ntBASIC6.69□□□□□ -1.34
COL1A1P02452 RPL35AP28-201ENST00000459730 331 ntBASIC6.69□□□□□ -1.34
COL1A1P02452 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC6.69□□□□□ -1.34
COL1A1P02452 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC6.69□□□□□ -1.34
COL1A1P02452 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC6.69□□□□□ -1.34
COL1A1P02452 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
COL1A1P02452 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC6.69□□□□□ -1.34
COL1A1P02452 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC6.69□□□□□ -1.34
COL1A1P02452 AP000769.2-201ENST00000602344 396 ntBASIC6.69□□□□□ -1.34
COL1A1P02452 AC087763.1-201ENST00000603391 286 ntBASIC6.69□□□□□ -1.34
COL1A1P02452 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC6.69□□□□□ -1.34
COL1A1P02452 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
COL1A1P02452 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
COL1A1P02452 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
COL1A1P02452 AC112255.1-201ENST00000624070 2493 ntBASIC6.69□□□□□ -1.34
COL1A1P02452 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.69□□□□□ -1.34
COL1A1P02452 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
COL1A1P02452 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC6.69□□□□□ -1.34
COL1A1P02452 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
COL1A1P02452 AP004289.1-201ENST00000436307 2205 ntBASIC6.69□□□□□ -1.34
COL1A1P02452 IL22RA2-203ENST00000349184 2801 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
COL1A1P02452 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
COL1A1P02452 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
COL1A1P02452 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC6.68□□□□□ -1.34
COL1A1P02452 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
COL1A1P02452 ZNF733P-202ENST00000444809 1573 ntBASIC6.68□□□□□ -1.34
COL1A1P02452 AL121886.1-201ENST00000358609 435 ntBASIC6.68□□□□□ -1.34
COL1A1P02452 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC6.68□□□□□ -1.34
COL1A1P02452 AL133325.1-201ENST00000421090 382 ntBASIC6.68□□□□□ -1.34
COL1A1P02452 CEACAMP7-201ENST00000444105 496 ntBASIC6.68□□□□□ -1.34
COL1A1P02452 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC6.68□□□□□ -1.34
COL1A1P02452 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC6.68□□□□□ -1.34
COL1A1P02452 ST13P12-201ENST00000508958 1094 ntBASIC6.68□□□□□ -1.34
COL1A1P02452 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC6.68□□□□□ -1.34
COL1A1P02452 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.68□□□□□ -1.34
COL1A1P02452 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.68□□□□□ -1.34
COL1A1P02452 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC6.68□□□□□ -1.34
COL1A1P02452 NPM1P42-201ENST00000560329 862 ntBASIC6.68□□□□□ -1.34
COL1A1P02452 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
COL1A1P02452 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC6.68□□□□□ -1.34
COL1A1P02452 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC6.68□□□□□ -1.34
COL1A1P02452 AC109583.2-201ENST00000617367 129 ntBASIC6.68□□□□□ -1.34
COL1A1P02452 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC6.68□□□□□ -1.34
COL1A1P02452 AP001784.1-201ENST00000624107 428 ntBASIC6.68□□□□□ -1.34
COL1A1P02452 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC6.68□□□□□ -1.34
COL1A1P02452 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC6.68□□□□□ -1.34
COL1A1P02452 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
COL1A1P02452 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
COL1A1P02452 AC009779.8-201ENST00000641684 4384 ntBASIC6.68□□□□□ -1.34
COL1A1P02452 STK3-216ENST00000523601 3107 ntTSL 2 BASIC6.68□□□□□ -1.34
COL1A1P02452 HSPD1P7-201ENST00000447985 1686 ntBASIC6.68□□□□□ -1.34
COL1A1P02452 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
COL1A1P02452 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
COL1A1P02452 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
COL1A1P02452 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC6.68□□□□□ -1.34
COL1A1P02452 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
COL1A1P02452 EEF1A1P33-201ENST00000554413 1362 ntBASIC6.68□□□□□ -1.34
COL1A1P02452 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
COL1A1P02452 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
COL1A1P02452 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
COL1A1P02452 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
COL1A1P02452 AC009962.1-201ENST00000567327 3813 ntBASIC6.68□□□□□ -1.34
COL1A1P02452 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
COL1A1P02452 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
COL1A1P02452 ABCA11P-202ENST00000504019 2110 ntBASIC6.67□□□□□ -1.34
COL1A1P02452 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
COL1A1P02452 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
COL1A1P02452 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms