Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
CLDN9O95484 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
CLDN9O95484 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.47□□□□□ -1.53
CLDN9O95484 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
CLDN9O95484 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CLDN9O95484 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
CLDN9O95484 FGG-201ENST00000336098 1659 ntTSL 2 BASIC5.47□□□□□ -1.53
CLDN9O95484 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
CLDN9O95484 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.47□□□□□ -1.53
CLDN9O95484 CASC19-260ENST00000641828 2001 ntBASIC5.47□□□□□ -1.53
CLDN9O95484 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CLDN9O95484 RNA5SP326-201ENST00000363209 110 ntBASIC5.47□□□□□ -1.53
CLDN9O95484 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.47□□□□□ -1.53
CLDN9O95484 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.47□□□□□ -1.53
CLDN9O95484 BX323845.3-201ENST00000428215 527 ntBASIC5.47□□□□□ -1.53
CLDN9O95484 KCTD9P1-201ENST00000430462 1167 ntBASIC5.47□□□□□ -1.53
CLDN9O95484 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC5.47□□□□□ -1.53
CLDN9O95484 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.47□□□□□ -1.53
CLDN9O95484 AC110602.1-201ENST00000437414 318 ntBASIC5.47□□□□□ -1.53
CLDN9O95484 NANOGP9-201ENST00000439890 892 ntBASIC5.47□□□□□ -1.53
CLDN9O95484 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.47□□□□□ -1.53
CLDN9O95484 LINC02210-201ENST00000444561 288 ntBASIC5.47□□□□□ -1.53
CLDN9O95484 AC023271.1-201ENST00000445936 1090 ntBASIC5.47□□□□□ -1.53
CLDN9O95484 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC5.47□□□□□ -1.53
CLDN9O95484 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CLDN9O95484 AC009963.4-201ENST00000448535 339 ntBASIC5.47□□□□□ -1.53
CLDN9O95484 AL359839.1-201ENST00000451975 1160 ntBASIC5.47□□□□□ -1.53
CLDN9O95484 RNU7-157P-201ENST00000459600 66 ntBASIC5.47□□□□□ -1.53
CLDN9O95484 RPSAP37-201ENST00000470913 821 ntBASIC5.47□□□□□ -1.53
CLDN9O95484 SNRPCP3-201ENST00000474888 476 ntBASIC5.47□□□□□ -1.53
CLDN9O95484 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC5.47□□□□□ -1.53
CLDN9O95484 RPS26P24-201ENST00000497656 331 ntBASIC5.47□□□□□ -1.53
CLDN9O95484 PMS2P3-207ENST00000529061 717 ntBASIC5.47□□□□□ -1.53
CLDN9O95484 AC122688.1-201ENST00000541494 223 ntBASIC5.47□□□□□ -1.53
CLDN9O95484 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC5.47□□□□□ -1.53
CLDN9O95484 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.47□□□□□ -1.53
CLDN9O95484 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.47□□□□□ -1.53
CLDN9O95484 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.47□□□□□ -1.53
CLDN9O95484 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.47□□□□□ -1.53
CLDN9O95484 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CLDN9O95484 AL359742.1-201ENST00000622497 540 ntBASIC5.47□□□□□ -1.53
CLDN9O95484 OR8G3P-202ENST00000641572 1255 ntBASIC5.47□□□□□ -1.53
CLDN9O95484 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC5.47□□□□□ -1.53
CLDN9O95484 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
CLDN9O95484 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.47□□□□□ -1.53
CLDN9O95484 AC140134.1-201ENST00000511830 3544 ntBASIC5.47□□□□□ -1.53
CLDN9O95484 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.47□□□□□ -1.53
CLDN9O95484 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CLDN9O95484 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CLDN9O95484 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CLDN9O95484 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.47□□□□□ -1.53
CLDN9O95484 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
CLDN9O95484 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.47□□□□□ -1.53
CLDN9O95484 EEF1A1P21-201ENST00000512363 1344 ntBASIC5.47□□□□□ -1.53
CLDN9O95484 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
CLDN9O95484 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.46□□□□□ -1.53
CLDN9O95484 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
CLDN9O95484 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
CLDN9O95484 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
CLDN9O95484 AC104964.3-201ENST00000606115 2860 ntBASIC5.46□□□□□ -1.53
CLDN9O95484 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.46□□□□□ -1.53
CLDN9O95484 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.46□□□□□ -1.53
CLDN9O95484 PWAR1-201ENST00000624188 2414 ntBASIC5.46□□□□□ -1.53
CLDN9O95484 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.46□□□□□ -1.53
CLDN9O95484 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
CLDN9O95484 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
CLDN9O95484 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CLDN9O95484 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CLDN9O95484 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
CLDN9O95484 AL360270.2-201ENST00000562952 5985 ntBASIC5.46□□□□□ -1.54
CLDN9O95484 AC092681.1-201ENST00000297369 291 ntBASIC5.46□□□□□ -1.54
CLDN9O95484 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
CLDN9O95484 RPS6P23-201ENST00000413224 722 ntBASIC5.46□□□□□ -1.54
CLDN9O95484 AL022331.1-201ENST00000429025 477 ntBASIC5.46□□□□□ -1.54
CLDN9O95484 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC5.46□□□□□ -1.54
CLDN9O95484 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC5.46□□□□□ -1.54
CLDN9O95484 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CLDN9O95484 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CLDN9O95484 AC022215.1-201ENST00000481770 362 ntBASIC5.46□□□□□ -1.54
CLDN9O95484 NENFP3-201ENST00000503735 313 ntBASIC5.46□□□□□ -1.54
CLDN9O95484 AC114781.3-201ENST00000512083 142 ntBASIC5.46□□□□□ -1.54
CLDN9O95484 AC097486.1-201ENST00000515331 210 ntBASIC5.46□□□□□ -1.54
CLDN9O95484 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.46□□□□□ -1.54
CLDN9O95484 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.46□□□□□ -1.54
CLDN9O95484 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.46□□□□□ -1.54
CLDN9O95484 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CLDN9O95484 MIR4311-201ENST00000580794 100 ntBASIC5.46□□□□□ -1.54
CLDN9O95484 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.46□□□□□ -1.54
CLDN9O95484 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.46□□□□□ -1.54
CLDN9O95484 AC063977.5-201ENST00000601044 974 ntBASIC5.46□□□□□ -1.54
CLDN9O95484 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
CLDN9O95484 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CLDN9O95484 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CLDN9O95484 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.54
CLDN9O95484 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CLDN9O95484 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CLDN9O95484 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.46□□□□□ -1.54
CLDN9O95484 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.46□□□□□ -1.54
CLDN9O95484 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
CLDN9O95484 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms