Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 DSTNP5-201ENST00000427921 523 ntBASIC8.52□□□□□ -1.05
RAPGEF3O95398 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC8.52□□□□□ -1.05
RAPGEF3O95398 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC8.52□□□□□ -1.05
RAPGEF3O95398 AC004129.2-201ENST00000457229 287 ntBASIC8.52□□□□□ -1.05
RAPGEF3O95398 AC092324.1-201ENST00000468671 324 ntBASIC8.52□□□□□ -1.05
RAPGEF3O95398 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC8.52□□□□□ -1.05
RAPGEF3O95398 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC8.52□□□□□ -1.05
RAPGEF3O95398 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC8.52□□□□□ -1.05
RAPGEF3O95398 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
RAPGEF3O95398 AC114947.2-201ENST00000565748 2125 ntBASIC8.52□□□□□ -1.05
RAPGEF3O95398 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC8.52□□□□□ -1.05
RAPGEF3O95398 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC8.52□□□□□ -1.05
RAPGEF3O95398 MIR7641-1-201ENST00000627518 61 ntBASIC8.52□□□□□ -1.05
RAPGEF3O95398 AC009948.3-201ENST00000603415 1798 ntBASIC8.52□□□□□ -1.05
RAPGEF3O95398 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
RAPGEF3O95398 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
RAPGEF3O95398 AL356317.1-201ENST00000396110 1436 ntBASIC8.52□□□□□ -1.05
RAPGEF3O95398 OFD1P10Y-201ENST00000434110 1433 ntBASIC8.52□□□□□ -1.05
RAPGEF3O95398 AP003119.3-201ENST00000566747 4192 ntBASIC8.52□□□□□ -1.05
RAPGEF3O95398 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC8.52□□□□□ -1.05
RAPGEF3O95398 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
RAPGEF3O95398 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
RAPGEF3O95398 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC8.52□□□□□ -1.05
RAPGEF3O95398 ZDBF2-201ENST00000374423 10286 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
RAPGEF3O95398 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC8.51□□□□□ -1.05
RAPGEF3O95398 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
RAPGEF3O95398 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
RAPGEF3O95398 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
RAPGEF3O95398 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC8.51□□□□□ -1.05
RAPGEF3O95398 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
RAPGEF3O95398 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC8.51□□□□□ -1.05
RAPGEF3O95398 SNORA16A-201ENST00000384342 137 ntBASIC8.51□□□□□ -1.05
RAPGEF3O95398 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
RAPGEF3O95398 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC8.51□□□□□ -1.05
RAPGEF3O95398 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC8.51□□□□□ -1.05
RAPGEF3O95398 AC011753.3-201ENST00000443436 406 ntBASIC8.51□□□□□ -1.05
RAPGEF3O95398 RPL31P44-201ENST00000447680 377 ntBASIC8.51□□□□□ -1.05
RAPGEF3O95398 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC8.51□□□□□ -1.05
RAPGEF3O95398 AC008897.1-201ENST00000494006 347 ntBASIC8.51□□□□□ -1.05
RAPGEF3O95398 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC8.51□□□□□ -1.05
RAPGEF3O95398 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC8.51□□□□□ -1.05
RAPGEF3O95398 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC8.51□□□□□ -1.05
RAPGEF3O95398 MTND1P36-201ENST00000522384 936 ntBASIC8.51□□□□□ -1.05
RAPGEF3O95398 MAL2-208ENST00000523307 556 ntTSL 4 BASIC8.51□□□□□ -1.05
RAPGEF3O95398 AC063949.1-201ENST00000552900 865 ntBASIC8.51□□□□□ -1.05
RAPGEF3O95398 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
RAPGEF3O95398 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC8.51□□□□□ -1.05
RAPGEF3O95398 AC209154.1-201ENST00000582156 337 ntBASIC8.51□□□□□ -1.05
RAPGEF3O95398 AC090607.5-201ENST00000615692 224 ntBASIC8.51□□□□□ -1.05
RAPGEF3O95398 AC109583.2-201ENST00000617367 129 ntBASIC8.51□□□□□ -1.05
RAPGEF3O95398 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC8.51□□□□□ -1.05
RAPGEF3O95398 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
RAPGEF3O95398 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
RAPGEF3O95398 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC8.51□□□□□ -1.05
RAPGEF3O95398 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
RAPGEF3O95398 AC024341.1-201ENST00000526444 1552 ntBASIC8.51□□□□□ -1.05
RAPGEF3O95398 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
RAPGEF3O95398 SALL4P7-201ENST00000555779 3120 ntBASIC8.51□□□□□ -1.05
RAPGEF3O95398 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
RAPGEF3O95398 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
RAPGEF3O95398 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
RAPGEF3O95398 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
RAPGEF3O95398 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC8.5□□□□□ -1.05
RAPGEF3O95398 THAP12P9-201ENST00000503971 2360 ntBASIC8.5□□□□□ -1.05
RAPGEF3O95398 LPA-201ENST00000316300 6414 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
RAPGEF3O95398 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC8.5□□□□□ -1.05
RAPGEF3O95398 BMPR2-202ENST00000374580 11461 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
RAPGEF3O95398 TRGV7-201ENST00000427089 353 ntBASIC8.5□□□□□ -1.05
RAPGEF3O95398 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC8.5□□□□□ -1.05
RAPGEF3O95398 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC8.5□□□□□ -1.05
RAPGEF3O95398 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC8.5□□□□□ -1.05
RAPGEF3O95398 AC015864.1-201ENST00000496512 544 ntBASIC8.5□□□□□ -1.05
RAPGEF3O95398 UBE2Q2P10-201ENST00000514854 900 ntBASIC8.5□□□□□ -1.05
RAPGEF3O95398 RN7SKP147-201ENST00000517154 244 ntBASIC8.5□□□□□ -1.05
RAPGEF3O95398 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC8.5□□□□□ -1.05
RAPGEF3O95398 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC8.5□□□□□ -1.05
RAPGEF3O95398 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC8.5□□□□□ -1.05
RAPGEF3O95398 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC8.5□□□□□ -1.05
RAPGEF3O95398 CASC22-201ENST00000569713 386 ntTSL 5 BASIC8.5□□□□□ -1.05
RAPGEF3O95398 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
RAPGEF3O95398 AC069307.1-201ENST00000602820 447 ntBASIC8.5□□□□□ -1.05
RAPGEF3O95398 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC8.5□□□□□ -1.05
RAPGEF3O95398 AC025574.2-201ENST00000615621 514 ntBASIC8.5□□□□□ -1.05
RAPGEF3O95398 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC8.5□□□□□ -1.05
RAPGEF3O95398 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC8.5□□□□□ -1.05
RAPGEF3O95398 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
RAPGEF3O95398 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC8.5□□□□□ -1.05
RAPGEF3O95398 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
RAPGEF3O95398 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
RAPGEF3O95398 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
RAPGEF3O95398 KLHL32-207ENST00000620278 2642 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
RAPGEF3O95398 RSF1-201ENST00000308488 11550 ntAPPRIS P2 TSL 1 (best) BASIC8.49□□□□□ -1.05
RAPGEF3O95398 ZEB2-227ENST00000627532 9541 ntAPPRIS P2 TSL 1 (best) BASIC8.49□□□□□ -1.05
RAPGEF3O95398 WDCP-202ENST00000406895 3700 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
RAPGEF3O95398 MAPK10-344ENST00000641718 3746 ntBASIC8.49□□□□□ -1.05
RAPGEF3O95398 EPS15P1-202ENST00000459691 2071 ntBASIC8.49□□□□□ -1.05
RAPGEF3O95398 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
RAPGEF3O95398 SLC15A2-205ENST00000489711 5673 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
RAPGEF3O95398 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC8.49□□□□□ -1.05
RAPGEF3O95398 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 306.9 ms