Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 AL161636.2-201ENST00000445179 927 ntBASIC5.5□□□□□ -1.53
TRBV5-4A0A0C4DH59 RPL36AP39-201ENST00000445859 318 ntBASIC5.5□□□□□ -1.53
TRBV5-4A0A0C4DH59 AC099786.1-201ENST00000446238 670 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TRBV5-4A0A0C4DH59 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.5□□□□□ -1.53
TRBV5-4A0A0C4DH59 RN7SL188P-201ENST00000469842 285 ntBASIC5.5□□□□□ -1.53
TRBV5-4A0A0C4DH59 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.5□□□□□ -1.53
TRBV5-4A0A0C4DH59 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.5□□□□□ -1.53
TRBV5-4A0A0C4DH59 TMEM97P2-201ENST00000517841 403 ntBASIC5.5□□□□□ -1.53
TRBV5-4A0A0C4DH59 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
TRBV5-4A0A0C4DH59 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.5□□□□□ -1.53
TRBV5-4A0A0C4DH59 MIR4505-201ENST00000582238 73 ntBASIC5.5□□□□□ -1.53
TRBV5-4A0A0C4DH59 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC5.5□□□□□ -1.53
TRBV5-4A0A0C4DH59 AC012616.1-201ENST00000600294 197 ntBASIC5.5□□□□□ -1.53
TRBV5-4A0A0C4DH59 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.5□□□□□ -1.53
TRBV5-4A0A0C4DH59 AC009237.12-201ENST00000604755 742 ntBASIC5.5□□□□□ -1.53
TRBV5-4A0A0C4DH59 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TRBV5-4A0A0C4DH59 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.5□□□□□ -1.53
TRBV5-4A0A0C4DH59 AC103703.1-201ENST00000634783 663 ntBASIC5.5□□□□□ -1.53
TRBV5-4A0A0C4DH59 AC009234.1-201ENST00000634985 895 ntTSL 5 BASIC5.5□□□□□ -1.53
TRBV5-4A0A0C4DH59 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
TRBV5-4A0A0C4DH59 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TRBV5-4A0A0C4DH59 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
TRBV5-4A0A0C4DH59 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
TRBV5-4A0A0C4DH59 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TRBV5-4A0A0C4DH59 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
TRBV5-4A0A0C4DH59 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
TRBV5-4A0A0C4DH59 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
TRBV5-4A0A0C4DH59 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TRBV5-4A0A0C4DH59 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TRBV5-4A0A0C4DH59 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
TRBV5-4A0A0C4DH59 AL137141.1-201ENST00000624622 4836 ntBASIC5.49□□□□□ -1.53
TRBV5-4A0A0C4DH59 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
TRBV5-4A0A0C4DH59 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TRBV5-4A0A0C4DH59 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.49□□□□□ -1.53
TRBV5-4A0A0C4DH59 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
TRBV5-4A0A0C4DH59 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.49□□□□□ -1.53
TRBV5-4A0A0C4DH59 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.49□□□□□ -1.53
TRBV5-4A0A0C4DH59 TMSB4XP4-201ENST00000323496 618 ntBASIC5.49□□□□□ -1.53
TRBV5-4A0A0C4DH59 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
TRBV5-4A0A0C4DH59 MIR551A-201ENST00000385042 96 ntBASIC5.49□□□□□ -1.53
TRBV5-4A0A0C4DH59 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC5.49□□□□□ -1.53
TRBV5-4A0A0C4DH59 AL391422.1-201ENST00000402155 436 ntBASIC5.49□□□□□ -1.53
TRBV5-4A0A0C4DH59 RPSAP35-201ENST00000413753 818 ntBASIC5.49□□□□□ -1.53
TRBV5-4A0A0C4DH59 OR6E1P-201ENST00000414424 923 ntBASIC5.49□□□□□ -1.53
TRBV5-4A0A0C4DH59 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.49□□□□□ -1.53
TRBV5-4A0A0C4DH59 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.49□□□□□ -1.53
TRBV5-4A0A0C4DH59 RPL7P56-201ENST00000429441 717 ntBASIC5.49□□□□□ -1.53
TRBV5-4A0A0C4DH59 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.49□□□□□ -1.53
TRBV5-4A0A0C4DH59 AC138761.5-201ENST00000433967 325 ntBASIC5.49□□□□□ -1.53
TRBV5-4A0A0C4DH59 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.49□□□□□ -1.53
TRBV5-4A0A0C4DH59 AL358876.1-201ENST00000453364 1075 ntBASIC5.49□□□□□ -1.53
TRBV5-4A0A0C4DH59 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.49□□□□□ -1.53
TRBV5-4A0A0C4DH59 RPL5P16-201ENST00000471467 790 ntBASIC5.49□□□□□ -1.53
TRBV5-4A0A0C4DH59 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TRBV5-4A0A0C4DH59 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TRBV5-4A0A0C4DH59 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.49□□□□□ -1.53
TRBV5-4A0A0C4DH59 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TRBV5-4A0A0C4DH59 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.49□□□□□ -1.53
TRBV5-4A0A0C4DH59 AC111000.6-201ENST00000514471 709 ntBASIC5.49□□□□□ -1.53
TRBV5-4A0A0C4DH59 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.49□□□□□ -1.53
TRBV5-4A0A0C4DH59 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.49□□□□□ -1.53
TRBV5-4A0A0C4DH59 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC5.49□□□□□ -1.53
TRBV5-4A0A0C4DH59 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC5.49□□□□□ -1.53
TRBV5-4A0A0C4DH59 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.49□□□□□ -1.53
TRBV5-4A0A0C4DH59 RBM22P12-201ENST00000567098 1255 ntBASIC5.49□□□□□ -1.53
TRBV5-4A0A0C4DH59 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
TRBV5-4A0A0C4DH59 MIR1273E-201ENST00000581165 102 ntBASIC5.49□□□□□ -1.53
TRBV5-4A0A0C4DH59 MIR4310-201ENST00000582950 57 ntBASIC5.49□□□□□ -1.53
TRBV5-4A0A0C4DH59 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.49□□□□□ -1.53
TRBV5-4A0A0C4DH59 AL139124.1-201ENST00000609123 421 ntBASIC5.49□□□□□ -1.53
TRBV5-4A0A0C4DH59 AL118522.2-201ENST00000616045 615 ntBASIC5.49□□□□□ -1.53
TRBV5-4A0A0C4DH59 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC5.49□□□□□ -1.53
TRBV5-4A0A0C4DH59 AC138627.1-204ENST00000641894 765 ntBASIC5.49□□□□□ -1.53
TRBV5-4A0A0C4DH59 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.49□□□□□ -1.53
TRBV5-4A0A0C4DH59 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TRBV5-4A0A0C4DH59 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
TRBV5-4A0A0C4DH59 AC239868.2-201ENST00000564237 4527 ntBASIC5.49□□□□□ -1.53
TRBV5-4A0A0C4DH59 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
TRBV5-4A0A0C4DH59 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TRBV5-4A0A0C4DH59 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.49□□□□□ -1.53
TRBV5-4A0A0C4DH59 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TRBV5-4A0A0C4DH59 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
TRBV5-4A0A0C4DH59 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TRBV5-4A0A0C4DH59 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
TRBV5-4A0A0C4DH59 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.48□□□□□ -1.53
TRBV5-4A0A0C4DH59 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.48□□□□□ -1.53
TRBV5-4A0A0C4DH59 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
TRBV5-4A0A0C4DH59 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
TRBV5-4A0A0C4DH59 AC092646.2-201ENST00000431242 2095 ntBASIC5.48□□□□□ -1.53
TRBV5-4A0A0C4DH59 RNA5SP453-201ENST00000362503 119 ntBASIC5.48□□□□□ -1.53
TRBV5-4A0A0C4DH59 RN7SKP6-201ENST00000364795 319 ntBASIC5.48□□□□□ -1.53
TRBV5-4A0A0C4DH59 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
TRBV5-4A0A0C4DH59 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
TRBV5-4A0A0C4DH59 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
TRBV5-4A0A0C4DH59 SNORA81-201ENST00000408493 178 ntBASIC5.48□□□□□ -1.53
TRBV5-4A0A0C4DH59 RN7SKP286-201ENST00000410894 299 ntBASIC5.48□□□□□ -1.53
TRBV5-4A0A0C4DH59 AL354868.1-201ENST00000417077 482 ntBASIC5.48□□□□□ -1.53
TRBV5-4A0A0C4DH59 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC5.48□□□□□ -1.53
TRBV5-4A0A0C4DH59 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC5.48□□□□□ -1.53
TRBV5-4A0A0C4DH59 AC244033.1-201ENST00000426826 870 ntBASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms