Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC6.45□□□□□ -1.38
BLOC1S4Q9NUP1 AC067773.1-201ENST00000603284 1094 ntBASIC6.45□□□□□ -1.38
BLOC1S4Q9NUP1 AF117829.2-201ENST00000619538 361 ntBASIC6.45□□□□□ -1.38
BLOC1S4Q9NUP1 AC129778.1-202ENST00000623812 261 ntBASIC6.45□□□□□ -1.38
BLOC1S4Q9NUP1 AL591379.1-207ENST00000635982 261 ntBASIC6.45□□□□□ -1.38
BLOC1S4Q9NUP1 AMYH02020865.1-205ENST00000636189 261 ntBASIC6.45□□□□□ -1.38
BLOC1S4Q9NUP1 5S_rRNA.28-201ENST00000638107 119 ntBASIC6.45□□□□□ -1.38
BLOC1S4Q9NUP1 OR8A1-204ENST00000642111 1145 ntBASIC6.45□□□□□ -1.38
BLOC1S4Q9NUP1 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.45□□□□□ -1.38
BLOC1S4Q9NUP1 AC007159.1-201ENST00000566529 4706 ntBASIC6.45□□□□□ -1.38
BLOC1S4Q9NUP1 AC117409.1-201ENST00000470499 1310 ntBASIC6.45□□□□□ -1.38
BLOC1S4Q9NUP1 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC6.45□□□□□ -1.38
BLOC1S4Q9NUP1 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
BLOC1S4Q9NUP1 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.45□□□□□ -1.38
BLOC1S4Q9NUP1 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC6.44□□□□□ -1.38
BLOC1S4Q9NUP1 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
BLOC1S4Q9NUP1 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
BLOC1S4Q9NUP1 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.44□□□□□ -1.38
BLOC1S4Q9NUP1 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.44□□□□□ -1.38
BLOC1S4Q9NUP1 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
BLOC1S4Q9NUP1 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
BLOC1S4Q9NUP1 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
BLOC1S4Q9NUP1 AL159987.1-201ENST00000347911 293 ntBASIC6.44□□□□□ -1.38
BLOC1S4Q9NUP1 MIR130A-201ENST00000385274 89 ntBASIC6.44□□□□□ -1.38
BLOC1S4Q9NUP1 AL607077.1-201ENST00000401718 499 ntBASIC6.44□□□□□ -1.38
BLOC1S4Q9NUP1 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC6.44□□□□□ -1.38
BLOC1S4Q9NUP1 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC6.44□□□□□ -1.38
BLOC1S4Q9NUP1 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC6.44□□□□□ -1.38
BLOC1S4Q9NUP1 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
BLOC1S4Q9NUP1 OR7E116P-201ENST00000448529 957 ntBASIC6.44□□□□□ -1.38
BLOC1S4Q9NUP1 RNU1-88P-201ENST00000459274 128 ntBASIC6.44□□□□□ -1.38
BLOC1S4Q9NUP1 AC073610.1-201ENST00000489971 396 ntBASIC6.44□□□□□ -1.38
BLOC1S4Q9NUP1 AC009120.1-201ENST00000493458 473 ntBASIC6.44□□□□□ -1.38
BLOC1S4Q9NUP1 PFN1P8-201ENST00000497012 543 ntBASIC6.44□□□□□ -1.38
BLOC1S4Q9NUP1 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC6.44□□□□□ -1.38
BLOC1S4Q9NUP1 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC6.44□□□□□ -1.38
BLOC1S4Q9NUP1 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC6.44□□□□□ -1.38
BLOC1S4Q9NUP1 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC6.44□□□□□ -1.38
BLOC1S4Q9NUP1 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC6.44□□□□□ -1.38
BLOC1S4Q9NUP1 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC6.44□□□□□ -1.38
BLOC1S4Q9NUP1 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC6.44□□□□□ -1.38
BLOC1S4Q9NUP1 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC6.44□□□□□ -1.38
BLOC1S4Q9NUP1 SNORD39.2-201ENST00000579995 76 ntBASIC6.44□□□□□ -1.38
BLOC1S4Q9NUP1 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC6.44□□□□□ -1.38
BLOC1S4Q9NUP1 AP001357.1-201ENST00000586304 1053 ntBASIC6.44□□□□□ -1.38
BLOC1S4Q9NUP1 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
BLOC1S4Q9NUP1 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
BLOC1S4Q9NUP1 AL592494.3-201ENST00000609485 464 ntBASIC6.44□□□□□ -1.38
BLOC1S4Q9NUP1 AC015922.4-201ENST00000612568 690 ntBASIC6.44□□□□□ -1.38
BLOC1S4Q9NUP1 AL035661.1-201ENST00000620459 1144 ntBASIC6.44□□□□□ -1.38
BLOC1S4Q9NUP1 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC6.44□□□□□ -1.38
BLOC1S4Q9NUP1 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
BLOC1S4Q9NUP1 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC6.44□□□□□ -1.38
BLOC1S4Q9NUP1 AC107021.2-201ENST00000567714 2095 ntBASIC6.44□□□□□ -1.38
BLOC1S4Q9NUP1 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
BLOC1S4Q9NUP1 AP000547.3-204ENST00000588548 2523 ntBASIC6.44□□□□□ -1.38
BLOC1S4Q9NUP1 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
BLOC1S4Q9NUP1 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
BLOC1S4Q9NUP1 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
BLOC1S4Q9NUP1 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
BLOC1S4Q9NUP1 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC6.44□□□□□ -1.38
BLOC1S4Q9NUP1 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC6.44□□□□□ -1.38
BLOC1S4Q9NUP1 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC6.44□□□□□ -1.38
BLOC1S4Q9NUP1 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.44□□□□□ -1.38
BLOC1S4Q9NUP1 AC007842.1-201ENST00000597336 2039 ntBASIC6.43□□□□□ -1.38
BLOC1S4Q9NUP1 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
BLOC1S4Q9NUP1 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
BLOC1S4Q9NUP1 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC6.43□□□□□ -1.38
BLOC1S4Q9NUP1 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
BLOC1S4Q9NUP1 AL356317.1-201ENST00000396110 1436 ntBASIC6.43□□□□□ -1.38
BLOC1S4Q9NUP1 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.43□□□□□ -1.38
BLOC1S4Q9NUP1 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
BLOC1S4Q9NUP1 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.43□□□□□ -1.38
BLOC1S4Q9NUP1 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
BLOC1S4Q9NUP1 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.43□□□□□ -1.38
BLOC1S4Q9NUP1 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
BLOC1S4Q9NUP1 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
BLOC1S4Q9NUP1 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
BLOC1S4Q9NUP1 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
BLOC1S4Q9NUP1 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC6.43□□□□□ -1.38
BLOC1S4Q9NUP1 FIGN-202ENST00000409634 746 ntTSL 5 BASIC6.43□□□□□ -1.38
BLOC1S4Q9NUP1 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC6.43□□□□□ -1.38
BLOC1S4Q9NUP1 NIFKP3-201ENST00000417799 865 ntBASIC6.43□□□□□ -1.38
BLOC1S4Q9NUP1 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
BLOC1S4Q9NUP1 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
BLOC1S4Q9NUP1 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC6.43□□□□□ -1.38
BLOC1S4Q9NUP1 AC019205.1-201ENST00000421830 730 ntBASIC6.43□□□□□ -1.38
BLOC1S4Q9NUP1 OR5W1P-201ENST00000423705 938 ntBASIC6.43□□□□□ -1.38
BLOC1S4Q9NUP1 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC6.43□□□□□ -1.38
BLOC1S4Q9NUP1 AC106901.1-201ENST00000425086 698 ntBASIC6.43□□□□□ -1.38
BLOC1S4Q9NUP1 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6.43□□□□□ -1.38
BLOC1S4Q9NUP1 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC6.43□□□□□ -1.38
BLOC1S4Q9NUP1 MRPS21P3-201ENST00000436696 262 ntBASIC6.43□□□□□ -1.38
BLOC1S4Q9NUP1 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC6.43□□□□□ -1.38
BLOC1S4Q9NUP1 STRADBP1-201ENST00000478954 1281 ntBASIC6.43□□□□□ -1.38
BLOC1S4Q9NUP1 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC6.43□□□□□ -1.38
BLOC1S4Q9NUP1 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
BLOC1S4Q9NUP1 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC6.43□□□□□ -1.38
BLOC1S4Q9NUP1 AC067805.1-201ENST00000559344 470 ntBASIC6.43□□□□□ -1.38
BLOC1S4Q9NUP1 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC6.43□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms