Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC5.28□□□□□ -1.56
CHD8Q9HCK8 RNU4ATAC-201ENST00000580972 127 ntBASIC5.28□□□□□ -1.56
CHD8Q9HCK8 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.28□□□□□ -1.56
CHD8Q9HCK8 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC5.28□□□□□ -1.56
CHD8Q9HCK8 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CHD8Q9HCK8 RTTN-222ENST00000640769 8088 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
CHD8Q9HCK8 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CHD8Q9HCK8 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CHD8Q9HCK8 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC5.28□□□□□ -1.56
CHD8Q9HCK8 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CHD8Q9HCK8 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC5.28□□□□□ -1.56
CHD8Q9HCK8 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
CHD8Q9HCK8 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC5.28□□□□□ -1.56
CHD8Q9HCK8 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CHD8Q9HCK8 PSD3-203ENST00000428502 6330 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CHD8Q9HCK8 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.28□□□□□ -1.56
CHD8Q9HCK8 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
CHD8Q9HCK8 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC5.28□□□□□ -1.56
CHD8Q9HCK8 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.28□□□□□ -1.56
CHD8Q9HCK8 RPS6P23-201ENST00000413224 722 ntBASIC5.28□□□□□ -1.56
CHD8Q9HCK8 DUTP4-201ENST00000424782 475 ntBASIC5.28□□□□□ -1.56
CHD8Q9HCK8 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC5.28□□□□□ -1.56
CHD8Q9HCK8 RNA5SP373-201ENST00000517271 95 ntBASIC5.28□□□□□ -1.56
CHD8Q9HCK8 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
CHD8Q9HCK8 AC007494.1-201ENST00000562293 760 ntBASIC5.28□□□□□ -1.56
CHD8Q9HCK8 AC097717.1-225ENST00000600829 709 ntTSL 5 BASIC5.28□□□□□ -1.56
CHD8Q9HCK8 PDCD6IPP1-202ENST00000622242 1064 ntBASIC5.28□□□□□ -1.56
CHD8Q9HCK8 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.28□□□□□ -1.56
CHD8Q9HCK8 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CHD8Q9HCK8 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CHD8Q9HCK8 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
CHD8Q9HCK8 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.28□□□□□ -1.56
CHD8Q9HCK8 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.28□□□□□ -1.56
CHD8Q9HCK8 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC5.28□□□□□ -1.56
CHD8Q9HCK8 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CHD8Q9HCK8 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.28□□□□□ -1.56
CHD8Q9HCK8 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
CHD8Q9HCK8 IRF5P1-201ENST00000504852 2164 ntBASIC5.27□□□□□ -1.57
CHD8Q9HCK8 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
CHD8Q9HCK8 MEF2C-210ENST00000506554 3469 ntTSL 5 BASIC5.27□□□□□ -1.57
CHD8Q9HCK8 ITPR1-202ENST00000354582 10242 ntTSL 5 BASIC5.27□□□□□ -1.57
CHD8Q9HCK8 AC079741.1-201ENST00000321498 212 ntBASIC5.27□□□□□ -1.57
CHD8Q9HCK8 OR10R3P-201ENST00000361688 942 ntBASIC5.27□□□□□ -1.57
CHD8Q9HCK8 MIR433-201ENST00000384837 93 ntBASIC5.27□□□□□ -1.57
CHD8Q9HCK8 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC5.27□□□□□ -1.57
CHD8Q9HCK8 AL445928.1-201ENST00000435545 222 ntBASIC5.27□□□□□ -1.57
CHD8Q9HCK8 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC5.27□□□□□ -1.57
CHD8Q9HCK8 PPIAP21-201ENST00000464473 501 ntBASIC5.27□□□□□ -1.57
CHD8Q9HCK8 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC5.27□□□□□ -1.57
CHD8Q9HCK8 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC5.27□□□□□ -1.57
CHD8Q9HCK8 PIK3AP1-203ENST00000371110 3151 ntTSL 2 BASIC5.27□□□□□ -1.57
CHD8Q9HCK8 WDR76-201ENST00000263795 3978 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
CHD8Q9HCK8 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CHD8Q9HCK8 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CHD8Q9HCK8 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
CHD8Q9HCK8 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.27□□□□□ -1.57
CHD8Q9HCK8 ALS2-201ENST00000264276 6644 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CHD8Q9HCK8 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
CHD8Q9HCK8 CASP8-203ENST00000323492 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
CHD8Q9HCK8 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CHD8Q9HCK8 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
CHD8Q9HCK8 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.27□□□□□ -1.57
CHD8Q9HCK8 AC105749.1-201ENST00000631338 2008 ntBASIC5.27□□□□□ -1.57
CHD8Q9HCK8 MIR634-201ENST00000385208 97 ntBASIC5.27□□□□□ -1.57
CHD8Q9HCK8 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.27□□□□□ -1.57
CHD8Q9HCK8 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.27□□□□□ -1.57
CHD8Q9HCK8 VDAC2P4-201ENST00000452925 711 ntBASIC5.27□□□□□ -1.57
CHD8Q9HCK8 AC139365.2-201ENST00000517972 253 ntBASIC5.27□□□□□ -1.57
CHD8Q9HCK8 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC5.27□□□□□ -1.57
CHD8Q9HCK8 AC138701.1-201ENST00000524329 714 ntBASIC5.27□□□□□ -1.57
CHD8Q9HCK8 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.27□□□□□ -1.57
CHD8Q9HCK8 AC106730.2-201ENST00000566641 540 ntBASIC5.27□□□□□ -1.57
CHD8Q9HCK8 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.27□□□□□ -1.57
CHD8Q9HCK8 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC5.27□□□□□ -1.57
CHD8Q9HCK8 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.27□□□□□ -1.57
CHD8Q9HCK8 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC5.27□□□□□ -1.57
CHD8Q9HCK8 AC096921.2-201ENST00000561507 1916 ntBASIC5.27□□□□□ -1.57
CHD8Q9HCK8 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC5.27□□□□□ -1.57
CHD8Q9HCK8 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CHD8Q9HCK8 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
CHD8Q9HCK8 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
CHD8Q9HCK8 PRRG1-201ENST00000378628 4493 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CHD8Q9HCK8 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC5.26□□□□□ -1.57
CHD8Q9HCK8 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC5.26□□□□□ -1.57
CHD8Q9HCK8 CHD8-201ENST00000399982 8229 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
CHD8Q9HCK8 FAM3C2-201ENST00000312214 681 ntBASIC5.26□□□□□ -1.57
CHD8Q9HCK8 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CHD8Q9HCK8 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.26□□□□□ -1.57
CHD8Q9HCK8 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.26□□□□□ -1.57
CHD8Q9HCK8 RPS27AP7-201ENST00000422792 455 ntBASIC5.26□□□□□ -1.57
CHD8Q9HCK8 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
CHD8Q9HCK8 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.26□□□□□ -1.57
CHD8Q9HCK8 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC5.26□□□□□ -1.57
CHD8Q9HCK8 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC5.26□□□□□ -1.57
CHD8Q9HCK8 AL031320.1-201ENST00000604177 357 ntBASIC5.26□□□□□ -1.57
CHD8Q9HCK8 AC012653.2-201ENST00000621880 420 ntBASIC5.26□□□□□ -1.57
CHD8Q9HCK8 CD109-201ENST00000287097 9130 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
CHD8Q9HCK8 AC008937.3-201ENST00000606813 1700 ntBASIC5.26□□□□□ -1.57
CHD8Q9HCK8 ZNF69-202ENST00000429654 2010 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
CHD8Q9HCK8 ZNF397-202ENST00000330501 5251 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms