Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
LRRC40Q9H9A6 UGT2B24P-201ENST00000514441 1597 ntBASIC5.8□□□□□ -1.48
LRRC40Q9H9A6 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
LRRC40Q9H9A6 SAMM50P1-201ENST00000455403 1399 ntBASIC5.8□□□□□ -1.48
LRRC40Q9H9A6 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
LRRC40Q9H9A6 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
LRRC40Q9H9A6 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
LRRC40Q9H9A6 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.79□□□□□ -1.48
LRRC40Q9H9A6 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.79□□□□□ -1.48
LRRC40Q9H9A6 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
LRRC40Q9H9A6 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
LRRC40Q9H9A6 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
LRRC40Q9H9A6 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
LRRC40Q9H9A6 TMSB4XP2-201ENST00000335179 210 ntBASIC5.79□□□□□ -1.48
LRRC40Q9H9A6 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC5.79□□□□□ -1.48
LRRC40Q9H9A6 RNU1-150P-201ENST00000362491 162 ntBASIC5.79□□□□□ -1.48
LRRC40Q9H9A6 RN7SKP187-201ENST00000365536 330 ntBASIC5.79□□□□□ -1.48
LRRC40Q9H9A6 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
LRRC40Q9H9A6 RNF10P1-201ENST00000418589 369 ntBASIC5.79□□□□□ -1.48
LRRC40Q9H9A6 REREP1Y-201ENST00000422655 198 ntBASIC5.79□□□□□ -1.48
LRRC40Q9H9A6 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.79□□□□□ -1.48
LRRC40Q9H9A6 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.79□□□□□ -1.48
LRRC40Q9H9A6 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC5.79□□□□□ -1.48
LRRC40Q9H9A6 AC138761.5-201ENST00000433967 325 ntBASIC5.79□□□□□ -1.48
LRRC40Q9H9A6 PCBP2P1-201ENST00000437262 977 ntBASIC5.79□□□□□ -1.48
LRRC40Q9H9A6 REREP2Y-201ENST00000439103 200 ntBASIC5.79□□□□□ -1.48
LRRC40Q9H9A6 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.79□□□□□ -1.48
LRRC40Q9H9A6 VN1R96P-201ENST00000446052 858 ntBASIC5.79□□□□□ -1.48
LRRC40Q9H9A6 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC5.79□□□□□ -1.48
LRRC40Q9H9A6 RPS23P9-201ENST00000448848 438 ntBASIC5.79□□□□□ -1.48
LRRC40Q9H9A6 AC019084.1-201ENST00000457337 432 ntBASIC5.79□□□□□ -1.48
LRRC40Q9H9A6 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
LRRC40Q9H9A6 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC5.79□□□□□ -1.48
LRRC40Q9H9A6 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.79□□□□□ -1.48
LRRC40Q9H9A6 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.79□□□□□ -1.48
LRRC40Q9H9A6 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.79□□□□□ -1.48
LRRC40Q9H9A6 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
LRRC40Q9H9A6 AC137627.1-201ENST00000545761 289 ntBASIC5.79□□□□□ -1.48
LRRC40Q9H9A6 AGGF1P7-201ENST00000562369 913 ntBASIC5.79□□□□□ -1.48
LRRC40Q9H9A6 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.79□□□□□ -1.48
LRRC40Q9H9A6 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.79□□□□□ -1.48
LRRC40Q9H9A6 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.79□□□□□ -1.48
LRRC40Q9H9A6 OR8G7P-201ENST00000616658 848 ntBASIC5.79□□□□□ -1.48
LRRC40Q9H9A6 RNA5SP439-201ENST00000617595 124 ntBASIC5.79□□□□□ -1.48
LRRC40Q9H9A6 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.79□□□□□ -1.48
LRRC40Q9H9A6 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.79□□□□□ -1.48
LRRC40Q9H9A6 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
LRRC40Q9H9A6 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.79□□□□□ -1.48
LRRC40Q9H9A6 IFIT1P1-201ENST00000400497 1449 ntBASIC5.79□□□□□ -1.48
LRRC40Q9H9A6 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
LRRC40Q9H9A6 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.79□□□□□ -1.48
LRRC40Q9H9A6 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.79□□□□□ -1.48
LRRC40Q9H9A6 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
LRRC40Q9H9A6 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
LRRC40Q9H9A6 EEF1A1P21-201ENST00000512363 1344 ntBASIC5.78□□□□□ -1.48
LRRC40Q9H9A6 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.78□□□□□ -1.48
LRRC40Q9H9A6 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
LRRC40Q9H9A6 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
LRRC40Q9H9A6 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
LRRC40Q9H9A6 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
LRRC40Q9H9A6 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
LRRC40Q9H9A6 RN7SKP185-201ENST00000362813 326 ntBASIC5.78□□□□□ -1.48
LRRC40Q9H9A6 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
LRRC40Q9H9A6 U3.23-201ENST00000391132 200 ntBASIC5.78□□□□□ -1.48
LRRC40Q9H9A6 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
LRRC40Q9H9A6 MIR1203-201ENST00000408812 85 ntBASIC5.78□□□□□ -1.48
LRRC40Q9H9A6 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.78□□□□□ -1.48
LRRC40Q9H9A6 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.78□□□□□ -1.48
LRRC40Q9H9A6 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.78□□□□□ -1.48
LRRC40Q9H9A6 AL035660.1-201ENST00000422041 222 ntBASIC5.78□□□□□ -1.48
LRRC40Q9H9A6 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.78□□□□□ -1.48
LRRC40Q9H9A6 TMEM183AP1-205ENST00000432739 290 ntBASIC5.78□□□□□ -1.48
LRRC40Q9H9A6 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC5.78□□□□□ -1.48
LRRC40Q9H9A6 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC5.78□□□□□ -1.48
LRRC40Q9H9A6 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC5.78□□□□□ -1.48
LRRC40Q9H9A6 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.78□□□□□ -1.48
LRRC40Q9H9A6 AL359839.1-201ENST00000451975 1160 ntBASIC5.78□□□□□ -1.48
LRRC40Q9H9A6 ACA64.1-201ENST00000459171 127 ntBASIC5.78□□□□□ -1.48
LRRC40Q9H9A6 SNORD125-201ENST00000459538 96 ntBASIC5.78□□□□□ -1.48
LRRC40Q9H9A6 RPL32P33-201ENST00000487023 394 ntBASIC5.78□□□□□ -1.48
LRRC40Q9H9A6 RN7SL170P-201ENST00000487098 295 ntBASIC5.78□□□□□ -1.48
LRRC40Q9H9A6 AC073610.1-201ENST00000489971 396 ntBASIC5.78□□□□□ -1.48
LRRC40Q9H9A6 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.78□□□□□ -1.48
LRRC40Q9H9A6 AC097486.1-201ENST00000515331 210 ntBASIC5.78□□□□□ -1.48
LRRC40Q9H9A6 SCARNA6.1-201ENST00000516989 238 ntBASIC5.78□□□□□ -1.48
LRRC40Q9H9A6 AC021678.3-201ENST00000517893 476 ntBASIC5.78□□□□□ -1.48
LRRC40Q9H9A6 BCAS2P1-201ENST00000528022 632 ntBASIC5.78□□□□□ -1.48
LRRC40Q9H9A6 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
LRRC40Q9H9A6 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC5.78□□□□□ -1.48
LRRC40Q9H9A6 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC5.78□□□□□ -1.48
LRRC40Q9H9A6 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.78□□□□□ -1.48
LRRC40Q9H9A6 DHFRP1-201ENST00000579682 559 ntBASIC5.78□□□□□ -1.48
LRRC40Q9H9A6 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC5.78□□□□□ -1.48
LRRC40Q9H9A6 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.78□□□□□ -1.48
LRRC40Q9H9A6 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC5.78□□□□□ -1.48
LRRC40Q9H9A6 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
LRRC40Q9H9A6 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.78□□□□□ -1.48
LRRC40Q9H9A6 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.78□□□□□ -1.48
LRRC40Q9H9A6 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
LRRC40Q9H9A6 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms