Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC6.82□□□□□ -1.32
UPF3BQ9BZI7 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
UPF3BQ9BZI7 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6.82□□□□□ -1.32
UPF3BQ9BZI7 EEF1A1P33-201ENST00000554413 1362 ntBASIC6.82□□□□□ -1.32
UPF3BQ9BZI7 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
UPF3BQ9BZI7 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
UPF3BQ9BZI7 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC6.81□□□□□ -1.32
UPF3BQ9BZI7 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
UPF3BQ9BZI7 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC6.81□□□□□ -1.32
UPF3BQ9BZI7 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
UPF3BQ9BZI7 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC6.81□□□□□ -1.32
UPF3BQ9BZI7 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC6.81□□□□□ -1.32
UPF3BQ9BZI7 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC6.81□□□□□ -1.32
UPF3BQ9BZI7 ALB-220ENST00000621628 1606 ntTSL 5 BASIC6.81□□□□□ -1.32
UPF3BQ9BZI7 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
UPF3BQ9BZI7 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC6.81□□□□□ -1.32
UPF3BQ9BZI7 RNA5SP477-201ENST00000362639 119 ntBASIC6.81□□□□□ -1.32
UPF3BQ9BZI7 MIR105-2-201ENST00000385083 81 ntBASIC6.81□□□□□ -1.32
UPF3BQ9BZI7 MIR143-201ENST00000385300 106 ntBASIC6.81□□□□□ -1.32
UPF3BQ9BZI7 RNU11-201ENST00000387069 134 ntBASIC6.81□□□□□ -1.32
UPF3BQ9BZI7 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
UPF3BQ9BZI7 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC6.81□□□□□ -1.32
UPF3BQ9BZI7 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
UPF3BQ9BZI7 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC6.81□□□□□ -1.32
UPF3BQ9BZI7 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC6.81□□□□□ -1.32
UPF3BQ9BZI7 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC6.81□□□□□ -1.32
UPF3BQ9BZI7 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC6.81□□□□□ -1.32
UPF3BQ9BZI7 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC6.81□□□□□ -1.32
UPF3BQ9BZI7 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC6.81□□□□□ -1.32
UPF3BQ9BZI7 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC6.81□□□□□ -1.32
UPF3BQ9BZI7 OR7E18P-201ENST00000592589 702 ntBASIC6.81□□□□□ -1.32
UPF3BQ9BZI7 AL360012.1-201ENST00000602813 131 ntBASIC6.81□□□□□ -1.32
UPF3BQ9BZI7 AC015712.7-201ENST00000615211 635 ntBASIC6.81□□□□□ -1.32
UPF3BQ9BZI7 AC022919.1-201ENST00000624979 626 ntBASIC6.81□□□□□ -1.32
UPF3BQ9BZI7 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
UPF3BQ9BZI7 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
UPF3BQ9BZI7 UGT2B24P-201ENST00000514441 1597 ntBASIC6.81□□□□□ -1.32
UPF3BQ9BZI7 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
UPF3BQ9BZI7 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
UPF3BQ9BZI7 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
UPF3BQ9BZI7 WDR95P-201ENST00000425638 1542 ntBASIC6.81□□□□□ -1.32
UPF3BQ9BZI7 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC6.8□□□□□ -1.32
UPF3BQ9BZI7 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC6.8□□□□□ -1.32
UPF3BQ9BZI7 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC6.8□□□□□ -1.32
UPF3BQ9BZI7 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
UPF3BQ9BZI7 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
UPF3BQ9BZI7 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC6.8□□□□□ -1.32
UPF3BQ9BZI7 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC6.8□□□□□ -1.32
UPF3BQ9BZI7 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
UPF3BQ9BZI7 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC6.8□□□□□ -1.32
UPF3BQ9BZI7 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC6.8□□□□□ -1.32
UPF3BQ9BZI7 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
UPF3BQ9BZI7 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
UPF3BQ9BZI7 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
UPF3BQ9BZI7 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC6.8□□□□□ -1.32
UPF3BQ9BZI7 AC019205.1-201ENST00000421830 730 ntBASIC6.8□□□□□ -1.32
UPF3BQ9BZI7 OR5W1P-201ENST00000423705 938 ntBASIC6.8□□□□□ -1.32
UPF3BQ9BZI7 VN1R21P-201ENST00000426703 765 ntBASIC6.8□□□□□ -1.32
UPF3BQ9BZI7 AC126120.1-201ENST00000431082 470 ntBASIC6.8□□□□□ -1.32
UPF3BQ9BZI7 KATNBL1P2-201ENST00000433311 835 ntBASIC6.8□□□□□ -1.32
UPF3BQ9BZI7 PCBP2P1-201ENST00000437262 977 ntBASIC6.8□□□□□ -1.32
UPF3BQ9BZI7 KRTAP8-2P-201ENST00000440620 186 ntBASIC6.8□□□□□ -1.32
UPF3BQ9BZI7 AC099521.1-201ENST00000482557 334 ntBASIC6.8□□□□□ -1.32
UPF3BQ9BZI7 GAPDHP62-201ENST00000515313 990 ntBASIC6.8□□□□□ -1.32
UPF3BQ9BZI7 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC6.8□□□□□ -1.32
UPF3BQ9BZI7 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC6.8□□□□□ -1.32
UPF3BQ9BZI7 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.8□□□□□ -1.32
UPF3BQ9BZI7 AC137627.1-201ENST00000545761 289 ntBASIC6.8□□□□□ -1.32
UPF3BQ9BZI7 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC6.8□□□□□ -1.32
UPF3BQ9BZI7 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC6.8□□□□□ -1.32
UPF3BQ9BZI7 AC068305.2-201ENST00000550567 1205 ntBASIC6.8□□□□□ -1.32
UPF3BQ9BZI7 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC6.8□□□□□ -1.32
UPF3BQ9BZI7 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC6.8□□□□□ -1.32
UPF3BQ9BZI7 AC073429.2-201ENST00000569694 1444 ntBASIC6.8□□□□□ -1.32
UPF3BQ9BZI7 DHFRP1-201ENST00000579682 559 ntBASIC6.8□□□□□ -1.32
UPF3BQ9BZI7 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
UPF3BQ9BZI7 PDZK1P1-202ENST00000425209 1350 ntBASIC6.8□□□□□ -1.32
UPF3BQ9BZI7 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC6.8□□□□□ -1.32
UPF3BQ9BZI7 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC6.8□□□□□ -1.32
UPF3BQ9BZI7 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
UPF3BQ9BZI7 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
UPF3BQ9BZI7 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
UPF3BQ9BZI7 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
UPF3BQ9BZI7 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
UPF3BQ9BZI7 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC6.79□□□□□ -1.32
UPF3BQ9BZI7 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
UPF3BQ9BZI7 MIR1178-201ENST00000408396 91 ntBASIC6.79□□□□□ -1.32
UPF3BQ9BZI7 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC6.79□□□□□ -1.32
UPF3BQ9BZI7 NIFKP3-201ENST00000417799 865 ntBASIC6.79□□□□□ -1.32
UPF3BQ9BZI7 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC6.79□□□□□ -1.32
UPF3BQ9BZI7 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC6.79□□□□□ -1.32
UPF3BQ9BZI7 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC6.79□□□□□ -1.32
UPF3BQ9BZI7 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC6.79□□□□□ -1.32
UPF3BQ9BZI7 AC023141.9-201ENST00000458734 412 ntBASIC6.79□□□□□ -1.32
UPF3BQ9BZI7 RN7SL610P-201ENST00000463845 291 ntBASIC6.79□□□□□ -1.32
UPF3BQ9BZI7 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
UPF3BQ9BZI7 RPL32P33-201ENST00000487023 394 ntBASIC6.79□□□□□ -1.32
UPF3BQ9BZI7 OR7E157P-201ENST00000494376 911 ntBASIC6.79□□□□□ -1.32
UPF3BQ9BZI7 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
UPF3BQ9BZI7 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC6.79□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms