Protein–RNA interactions for Protein: Q9BY43

CHMP4A, Charged multivesicular body protein 4a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4AQ9BY43 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC7.76□□□□□ -1.17
CHMP4AQ9BY43 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC7.76□□□□□ -1.17
CHMP4AQ9BY43 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC7.76□□□□□ -1.17
CHMP4AQ9BY43 OR4A40P-201ENST00000533878 948 ntBASIC7.76□□□□□ -1.17
CHMP4AQ9BY43 ASB8-203ENST00000535988 679 ntTSL 2 BASIC7.76□□□□□ -1.17
CHMP4AQ9BY43 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC7.76□□□□□ -1.17
CHMP4AQ9BY43 AC090826.1-203ENST00000569235 490 ntBASIC7.76□□□□□ -1.17
CHMP4AQ9BY43 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC7.76□□□□□ -1.17
CHMP4AQ9BY43 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC7.76□□□□□ -1.17
CHMP4AQ9BY43 AC108673.3-201ENST00000609183 335 ntBASIC7.76□□□□□ -1.17
CHMP4AQ9BY43 AP001885.1-201ENST00000621658 558 ntBASIC7.76□□□□□ -1.17
CHMP4AQ9BY43 AC092159.4-201ENST00000624944 550 ntBASIC7.76□□□□□ -1.17
CHMP4AQ9BY43 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
CHMP4AQ9BY43 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
CHMP4AQ9BY43 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC7.76□□□□□ -1.17
CHMP4AQ9BY43 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC7.76□□□□□ -1.17
CHMP4AQ9BY43 OR9K1P-202ENST00000641111 3217 ntBASIC7.76□□□□□ -1.17
CHMP4AQ9BY43 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CHMP4AQ9BY43 AL592429.1-201ENST00000403909 1473 ntBASIC7.75□□□□□ -1.17
CHMP4AQ9BY43 AC010329.2-201ENST00000595195 2737 ntBASIC7.75□□□□□ -1.17
CHMP4AQ9BY43 DMD-222ENST00000474231 5209 ntTSL 5 BASIC7.75□□□□□ -1.17
CHMP4AQ9BY43 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
CHMP4AQ9BY43 LINC01963-201ENST00000562038 3148 ntBASIC7.75□□□□□ -1.17
CHMP4AQ9BY43 AC109446.4-201ENST00000623235 2755 ntBASIC7.75□□□□□ -1.17
CHMP4AQ9BY43 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CHMP4AQ9BY43 AC020656.2-201ENST00000613291 5309 ntBASIC7.75□□□□□ -1.17
CHMP4AQ9BY43 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
CHMP4AQ9BY43 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC7.75□□□□□ -1.17
CHMP4AQ9BY43 RNA5SP375-201ENST00000362975 119 ntBASIC7.75□□□□□ -1.17
CHMP4AQ9BY43 ZNF736P10Y-201ENST00000403990 1110 ntBASIC7.75□□□□□ -1.17
CHMP4AQ9BY43 HMGN1P20-201ENST00000411849 300 ntBASIC7.75□□□□□ -1.17
CHMP4AQ9BY43 TMA16P2-201ENST00000413187 601 ntBASIC7.75□□□□□ -1.17
CHMP4AQ9BY43 MTCYBP7-201ENST00000419540 1134 ntBASIC7.75□□□□□ -1.17
CHMP4AQ9BY43 AC115283.1-201ENST00000427353 400 ntBASIC7.75□□□□□ -1.17
CHMP4AQ9BY43 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC7.75□□□□□ -1.17
CHMP4AQ9BY43 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC7.75□□□□□ -1.17
CHMP4AQ9BY43 AL157884.3-201ENST00000448273 1184 ntBASIC7.75□□□□□ -1.17
CHMP4AQ9BY43 AC112187.1-201ENST00000455837 479 ntBASIC7.75□□□□□ -1.17
CHMP4AQ9BY43 NDUFA5P5-201ENST00000468361 342 ntBASIC7.75□□□□□ -1.17
CHMP4AQ9BY43 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC7.75□□□□□ -1.17
CHMP4AQ9BY43 LARP7P4-201ENST00000481075 878 ntBASIC7.75□□□□□ -1.17
CHMP4AQ9BY43 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC7.75□□□□□ -1.17
CHMP4AQ9BY43 RN7SKP238-201ENST00000516483 249 ntBASIC7.75□□□□□ -1.17
CHMP4AQ9BY43 RNA5SP271-201ENST00000516700 88 ntBASIC7.75□□□□□ -1.17
CHMP4AQ9BY43 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC7.75□□□□□ -1.17
CHMP4AQ9BY43 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC7.75□□□□□ -1.17
CHMP4AQ9BY43 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC7.75□□□□□ -1.17
CHMP4AQ9BY43 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CHMP4AQ9BY43 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC7.75□□□□□ -1.17
CHMP4AQ9BY43 AC009303.3-201ENST00000591103 736 ntBASIC7.75□□□□□ -1.17
CHMP4AQ9BY43 AC034236.3-201ENST00000605999 461 ntBASIC7.75□□□□□ -1.17
CHMP4AQ9BY43 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
CHMP4AQ9BY43 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
CHMP4AQ9BY43 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC7.75□□□□□ -1.17
CHMP4AQ9BY43 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
CHMP4AQ9BY43 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CHMP4AQ9BY43 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC7.75□□□□□ -1.17
CHMP4AQ9BY43 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
CHMP4AQ9BY43 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
CHMP4AQ9BY43 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
CHMP4AQ9BY43 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC7.74□□□□□ -1.17
CHMP4AQ9BY43 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
CHMP4AQ9BY43 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
CHMP4AQ9BY43 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
CHMP4AQ9BY43 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC7.74□□□□□ -1.17
CHMP4AQ9BY43 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
CHMP4AQ9BY43 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC7.74□□□□□ -1.17
CHMP4AQ9BY43 THAP12P9-201ENST00000503971 2360 ntBASIC7.74□□□□□ -1.17
CHMP4AQ9BY43 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
CHMP4AQ9BY43 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
CHMP4AQ9BY43 AC007996.1-201ENST00000620414 2821 ntBASIC7.74□□□□□ -1.17
CHMP4AQ9BY43 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC7.74□□□□□ -1.17
CHMP4AQ9BY43 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
CHMP4AQ9BY43 AL035660.1-201ENST00000422041 222 ntBASIC7.74□□□□□ -1.17
CHMP4AQ9BY43 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC7.74□□□□□ -1.17
CHMP4AQ9BY43 VN1R48P-201ENST00000448149 1036 ntBASIC7.74□□□□□ -1.17
CHMP4AQ9BY43 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC7.74□□□□□ -1.17
CHMP4AQ9BY43 ACA64.1-201ENST00000459171 127 ntBASIC7.74□□□□□ -1.17
CHMP4AQ9BY43 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC7.74□□□□□ -1.17
CHMP4AQ9BY43 CCDC11P1-201ENST00000503137 1162 ntBASIC7.74□□□□□ -1.17
CHMP4AQ9BY43 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC7.74□□□□□ -1.17
CHMP4AQ9BY43 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC7.74□□□□□ -1.17
CHMP4AQ9BY43 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC7.74□□□□□ -1.17
CHMP4AQ9BY43 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC7.74□□□□□ -1.17
CHMP4AQ9BY43 OR51C1P-201ENST00000608504 942 ntBASIC7.74□□□□□ -1.17
CHMP4AQ9BY43 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC7.74□□□□□ -1.17
CHMP4AQ9BY43 AL136228.1-201ENST00000622221 319 ntBASIC7.74□□□□□ -1.17
CHMP4AQ9BY43 AC002044.3-201ENST00000623314 541 ntBASIC7.74□□□□□ -1.17
CHMP4AQ9BY43 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC7.74□□□□□ -1.17
CHMP4AQ9BY43 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
CHMP4AQ9BY43 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
CHMP4AQ9BY43 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC7.74□□□□□ -1.17
CHMP4AQ9BY43 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
CHMP4AQ9BY43 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
CHMP4AQ9BY43 AC107027.3-201ENST00000565095 3473 ntBASIC7.74□□□□□ -1.17
CHMP4AQ9BY43 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC7.74□□□□□ -1.17
CHMP4AQ9BY43 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
CHMP4AQ9BY43 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC7.74□□□□□ -1.17
CHMP4AQ9BY43 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
CHMP4AQ9BY43 NXF4-202ENST00000416098 1465 ntBASIC7.74□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 204.8 ms