Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC4.88□□□□□ -1.63
S1PR3Q99500 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
S1PR3Q99500 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
S1PR3Q99500 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC4.87□□□□□ -1.63
S1PR3Q99500 TEK-205ENST00000615002 4666 ntTSL 5 BASIC4.87□□□□□ -1.63
S1PR3Q99500 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC4.87□□□□□ -1.63
S1PR3Q99500 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
S1PR3Q99500 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC4.87□□□□□ -1.63
S1PR3Q99500 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.87□□□□□ -1.63
S1PR3Q99500 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC4.87□□□□□ -1.63
S1PR3Q99500 HSPD1P9-201ENST00000420325 1636 ntBASIC4.87□□□□□ -1.63
S1PR3Q99500 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
S1PR3Q99500 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
S1PR3Q99500 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC4.87□□□□□ -1.63
S1PR3Q99500 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC4.87□□□□□ -1.63
S1PR3Q99500 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
S1PR3Q99500 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
S1PR3Q99500 RNA5SP110-201ENST00000362638 115 ntBASIC4.87□□□□□ -1.63
S1PR3Q99500 RNU1-65P-201ENST00000363919 148 ntBASIC4.87□□□□□ -1.63
S1PR3Q99500 RNA5SP211-201ENST00000365516 117 ntBASIC4.87□□□□□ -1.63
S1PR3Q99500 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
S1PR3Q99500 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
S1PR3Q99500 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
S1PR3Q99500 RPA3-204ENST00000406109 434 ntTSL 3 BASIC4.87□□□□□ -1.63
S1PR3Q99500 AMZ2P2-201ENST00000406819 1057 ntBASIC4.87□□□□□ -1.63
S1PR3Q99500 AC245096.1-201ENST00000413104 546 ntBASIC4.87□□□□□ -1.63
S1PR3Q99500 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC4.87□□□□□ -1.63
S1PR3Q99500 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC4.87□□□□□ -1.63
S1PR3Q99500 USP24P1-201ENST00000433802 779 ntBASIC4.87□□□□□ -1.63
S1PR3Q99500 KRT8P51-201ENST00000438938 274 ntBASIC4.87□□□□□ -1.63
S1PR3Q99500 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
S1PR3Q99500 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC4.87□□□□□ -1.63
S1PR3Q99500 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC4.87□□□□□ -1.63
S1PR3Q99500 AL513343.1-201ENST00000451818 792 ntBASIC4.87□□□□□ -1.63
S1PR3Q99500 SDC4P-201ENST00000453285 601 ntBASIC4.87□□□□□ -1.63
S1PR3Q99500 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC4.87□□□□□ -1.63
S1PR3Q99500 AC009963.3-201ENST00000458090 486 ntBASIC4.87□□□□□ -1.63
S1PR3Q99500 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
S1PR3Q99500 OR7E99P-201ENST00000505750 922 ntBASIC4.87□□□□□ -1.63
S1PR3Q99500 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
S1PR3Q99500 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC4.87□□□□□ -1.63
S1PR3Q99500 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC4.87□□□□□ -1.63
S1PR3Q99500 AC067904.2-201ENST00000517322 1283 ntBASIC4.87□□□□□ -1.63
S1PR3Q99500 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC4.87□□□□□ -1.63
S1PR3Q99500 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
S1PR3Q99500 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC4.87□□□□□ -1.63
S1PR3Q99500 AC023310.2-201ENST00000553844 547 ntBASIC4.87□□□□□ -1.63
S1PR3Q99500 OTX2-203ENST00000554559 715 ntTSL 5 BASIC4.87□□□□□ -1.63
S1PR3Q99500 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC4.87□□□□□ -1.63
S1PR3Q99500 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC4.87□□□□□ -1.63
S1PR3Q99500 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC4.87□□□□□ -1.63
S1PR3Q99500 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC4.87□□□□□ -1.63
S1PR3Q99500 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC4.87□□□□□ -1.63
S1PR3Q99500 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC4.87□□□□□ -1.63
S1PR3Q99500 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC4.87□□□□□ -1.63
S1PR3Q99500 AC006115.2-201ENST00000596823 202 ntBASIC4.87□□□□□ -1.63
S1PR3Q99500 AC073333.2-201ENST00000603589 769 ntBASIC4.87□□□□□ -1.63
S1PR3Q99500 AC124916.2-201ENST00000604416 224 ntBASIC4.87□□□□□ -1.63
S1PR3Q99500 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC4.87□□□□□ -1.63
S1PR3Q99500 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC4.87□□□□□ -1.63
S1PR3Q99500 AC093388.1-201ENST00000609166 430 ntBASIC4.87□□□□□ -1.63
S1PR3Q99500 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC4.87□□□□□ -1.63
S1PR3Q99500 AC004241.3-201ENST00000611728 517 ntBASIC4.87□□□□□ -1.63
S1PR3Q99500 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC4.87□□□□□ -1.63
S1PR3Q99500 AL352984.2-202ENST00000613699 155 ntBASIC4.87□□□□□ -1.63
S1PR3Q99500 AL512652.1-201ENST00000619006 500 ntBASIC4.87□□□□□ -1.63
S1PR3Q99500 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
S1PR3Q99500 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
S1PR3Q99500 SAMMSON-210ENST00000641260 1308 ntBASIC4.87□□□□□ -1.63
S1PR3Q99500 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
S1PR3Q99500 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
S1PR3Q99500 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC4.87□□□□□ -1.63
S1PR3Q99500 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC4.87□□□□□ -1.63
S1PR3Q99500 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
S1PR3Q99500 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
S1PR3Q99500 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
S1PR3Q99500 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
S1PR3Q99500 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
S1PR3Q99500 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
S1PR3Q99500 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC4.86□□□□□ -1.63
S1PR3Q99500 AC130304.1-201ENST00000622942 2385 ntBASIC4.86□□□□□ -1.63
S1PR3Q99500 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
S1PR3Q99500 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
S1PR3Q99500 AC018628.1-201ENST00000624147 3819 ntBASIC4.86□□□□□ -1.63
S1PR3Q99500 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
S1PR3Q99500 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
S1PR3Q99500 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC4.86□□□□□ -1.63
S1PR3Q99500 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
S1PR3Q99500 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
S1PR3Q99500 MIR421-201ENST00000365696 85 ntBASIC4.86□□□□□ -1.63
S1PR3Q99500 AC099535.1-201ENST00000408928 371 ntBASIC4.86□□□□□ -1.63
S1PR3Q99500 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC4.86□□□□□ -1.63
S1PR3Q99500 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
S1PR3Q99500 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC4.86□□□□□ -1.63
S1PR3Q99500 MTCYBP7-201ENST00000419540 1134 ntBASIC4.86□□□□□ -1.63
S1PR3Q99500 PLA2G12AP2-201ENST00000424744 264 ntBASIC4.86□□□□□ -1.63
S1PR3Q99500 AC017019.1-201ENST00000426129 261 ntBASIC4.86□□□□□ -1.63
S1PR3Q99500 AL445528.1-201ENST00000426330 420 ntBASIC4.86□□□□□ -1.63
S1PR3Q99500 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC4.86□□□□□ -1.63
S1PR3Q99500 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms