Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.93□□□□□ -1.46
RPRD1AQ96P16 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
RPRD1AQ96P16 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
RPRD1AQ96P16 AL159987.1-201ENST00000347911 293 ntBASIC5.93□□□□□ -1.46
RPRD1AQ96P16 NIFKP3-201ENST00000417799 865 ntBASIC5.93□□□□□ -1.46
RPRD1AQ96P16 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.93□□□□□ -1.46
RPRD1AQ96P16 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.93□□□□□ -1.46
RPRD1AQ96P16 AC104843.2-201ENST00000427666 297 ntBASIC5.93□□□□□ -1.46
RPRD1AQ96P16 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.93□□□□□ -1.46
RPRD1AQ96P16 GAPDHP48-201ENST00000436626 961 ntBASIC5.93□□□□□ -1.46
RPRD1AQ96P16 AL136455.1-201ENST00000441083 1240 ntBASIC5.93□□□□□ -1.46
RPRD1AQ96P16 AL161636.2-201ENST00000445179 927 ntBASIC5.93□□□□□ -1.46
RPRD1AQ96P16 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.93□□□□□ -1.46
RPRD1AQ96P16 HMGN1P36-201ENST00000446623 298 ntBASIC5.93□□□□□ -1.46
RPRD1AQ96P16 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.93□□□□□ -1.46
RPRD1AQ96P16 AC016724.1-201ENST00000453215 421 ntBASIC5.93□□□□□ -1.46
RPRD1AQ96P16 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.93□□□□□ -1.46
RPRD1AQ96P16 SETP20-201ENST00000457046 852 ntBASIC5.93□□□□□ -1.46
RPRD1AQ96P16 RPSAP37-201ENST00000470913 821 ntBASIC5.93□□□□□ -1.46
RPRD1AQ96P16 AC090589.1-201ENST00000473109 362 ntBASIC5.93□□□□□ -1.46
RPRD1AQ96P16 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
RPRD1AQ96P16 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC5.93□□□□□ -1.46
RPRD1AQ96P16 PPIAP19-201ENST00000486414 492 ntBASIC5.93□□□□□ -1.46
RPRD1AQ96P16 OR7E157P-201ENST00000494376 911 ntBASIC5.93□□□□□ -1.46
RPRD1AQ96P16 AC104109.1-201ENST00000498563 436 ntBASIC5.93□□□□□ -1.46
RPRD1AQ96P16 AC109481.1-201ENST00000509173 282 ntBASIC5.93□□□□□ -1.46
RPRD1AQ96P16 ASNSP4-201ENST00000511103 447 ntBASIC5.93□□□□□ -1.46
RPRD1AQ96P16 AC074255.1-201ENST00000511259 501 ntBASIC5.93□□□□□ -1.46
RPRD1AQ96P16 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.93□□□□□ -1.46
RPRD1AQ96P16 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.93□□□□□ -1.46
RPRD1AQ96P16 AC096996.1-201ENST00000563813 325 ntBASIC5.93□□□□□ -1.46
RPRD1AQ96P16 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC5.93□□□□□ -1.46
RPRD1AQ96P16 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
RPRD1AQ96P16 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
RPRD1AQ96P16 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.93□□□□□ -1.46
RPRD1AQ96P16 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.93□□□□□ -1.46
RPRD1AQ96P16 AL512356.3-201ENST00000623005 461 ntBASIC5.93□□□□□ -1.46
RPRD1AQ96P16 AC103703.1-201ENST00000634783 663 ntBASIC5.93□□□□□ -1.46
RPRD1AQ96P16 LINC02019-201ENST00000608605 2060 ntBASIC5.93□□□□□ -1.46
RPRD1AQ96P16 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.93□□□□□ -1.46
RPRD1AQ96P16 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
RPRD1AQ96P16 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
RPRD1AQ96P16 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
RPRD1AQ96P16 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
RPRD1AQ96P16 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
RPRD1AQ96P16 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
RPRD1AQ96P16 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.93□□□□□ -1.46
RPRD1AQ96P16 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RPRD1AQ96P16 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
RPRD1AQ96P16 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RPRD1AQ96P16 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RPRD1AQ96P16 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.92□□□□□ -1.46
RPRD1AQ96P16 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
RPRD1AQ96P16 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RPRD1AQ96P16 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC5.92□□□□□ -1.46
RPRD1AQ96P16 SNORA64.1-201ENST00000362600 132 ntBASIC5.92□□□□□ -1.46
RPRD1AQ96P16 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
RPRD1AQ96P16 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
RPRD1AQ96P16 OR2AT2P-201ENST00000413438 905 ntBASIC5.92□□□□□ -1.46
RPRD1AQ96P16 CDY17P-201ENST00000414121 1282 ntBASIC5.92□□□□□ -1.46
RPRD1AQ96P16 RPS26P38-201ENST00000414476 348 ntBASIC5.92□□□□□ -1.46
RPRD1AQ96P16 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.92□□□□□ -1.46
RPRD1AQ96P16 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.92□□□□□ -1.46
RPRD1AQ96P16 AC093155.2-201ENST00000420734 937 ntBASIC5.92□□□□□ -1.46
RPRD1AQ96P16 RPL34P3-201ENST00000421454 338 ntBASIC5.92□□□□□ -1.46
RPRD1AQ96P16 CRIP1P1-201ENST00000427567 185 ntBASIC5.92□□□□□ -1.46
RPRD1AQ96P16 USP24P1-201ENST00000433802 779 ntBASIC5.92□□□□□ -1.46
RPRD1AQ96P16 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.92□□□□□ -1.46
RPRD1AQ96P16 AC064862.4-201ENST00000442180 334 ntBASIC5.92□□□□□ -1.46
RPRD1AQ96P16 LRRC37A14P-201ENST00000452297 462 ntBASIC5.92□□□□□ -1.46
RPRD1AQ96P16 FRG2FP-204ENST00000453982 852 ntBASIC5.92□□□□□ -1.46
RPRD1AQ96P16 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.92□□□□□ -1.46
RPRD1AQ96P16 NXT1P1-201ENST00000458481 316 ntBASIC5.92□□□□□ -1.46
RPRD1AQ96P16 RPS23P2-201ENST00000463671 415 ntBASIC5.92□□□□□ -1.46
RPRD1AQ96P16 RN7SL570P-201ENST00000484405 292 ntBASIC5.92□□□□□ -1.46
RPRD1AQ96P16 RPL7P51-201ENST00000490532 749 ntBASIC5.92□□□□□ -1.46
RPRD1AQ96P16 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.92□□□□□ -1.46
RPRD1AQ96P16 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.92□□□□□ -1.46
RPRD1AQ96P16 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.92□□□□□ -1.46
RPRD1AQ96P16 AL163952.1-202ENST00000569625 600 ntBASIC5.92□□□□□ -1.46
RPRD1AQ96P16 AL513327.3-201ENST00000602618 469 ntBASIC5.92□□□□□ -1.46
RPRD1AQ96P16 AC090607.5-201ENST00000615692 224 ntBASIC5.92□□□□□ -1.46
RPRD1AQ96P16 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RPRD1AQ96P16 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.92□□□□□ -1.46
RPRD1AQ96P16 AL390318.1-201ENST00000624564 687 ntBASIC5.92□□□□□ -1.46
RPRD1AQ96P16 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.92□□□□□ -1.46
RPRD1AQ96P16 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC5.92□□□□□ -1.46
RPRD1AQ96P16 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.92□□□□□ -1.46
RPRD1AQ96P16 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.92□□□□□ -1.46
RPRD1AQ96P16 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.92□□□□□ -1.46
RPRD1AQ96P16 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
RPRD1AQ96P16 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RPRD1AQ96P16 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.92□□□□□ -1.46
RPRD1AQ96P16 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RPRD1AQ96P16 AL359955.1-201ENST00000455242 3275 ntBASIC5.92□□□□□ -1.46
RPRD1AQ96P16 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RPRD1AQ96P16 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RPRD1AQ96P16 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.92□□□□□ -1.46
RPRD1AQ96P16 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
RPRD1AQ96P16 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms