Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC6.07□□□□□ -1.44
VPS50Q96JG6 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC6.07□□□□□ -1.44
VPS50Q96JG6 AL845552.1-201ENST00000556820 323 ntBASIC6.07□□□□□ -1.44
VPS50Q96JG6 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC6.07□□□□□ -1.44
VPS50Q96JG6 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC6.07□□□□□ -1.44
VPS50Q96JG6 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC6.07□□□□□ -1.44
VPS50Q96JG6 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC6.07□□□□□ -1.44
VPS50Q96JG6 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC6.07□□□□□ -1.44
VPS50Q96JG6 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.07□□□□□ -1.44
VPS50Q96JG6 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC6.07□□□□□ -1.44
VPS50Q96JG6 LAPTM4BP2-201ENST00000604542 446 ntBASIC6.07□□□□□ -1.44
VPS50Q96JG6 AC018754.1-201ENST00000607486 925 ntBASIC6.07□□□□□ -1.44
VPS50Q96JG6 AC018692.2-201ENST00000624130 348 ntBASIC6.07□□□□□ -1.44
VPS50Q96JG6 AP003485.1-201ENST00000625093 753 ntBASIC6.07□□□□□ -1.44
VPS50Q96JG6 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC6.07□□□□□ -1.44
VPS50Q96JG6 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC6.07□□□□□ -1.44
VPS50Q96JG6 LINC02495-203ENST00000636704 242 ntBASIC6.07□□□□□ -1.44
VPS50Q96JG6 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC6.07□□□□□ -1.44
VPS50Q96JG6 5S_rRNA.29-201ENST00000641250 107 ntBASIC6.07□□□□□ -1.44
VPS50Q96JG6 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.07□□□□□ -1.44
VPS50Q96JG6 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC6.07□□□□□ -1.44
VPS50Q96JG6 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC6.07□□□□□ -1.44
VPS50Q96JG6 CNOT6LP1-201ENST00000559681 1462 ntBASIC6.07□□□□□ -1.44
VPS50Q96JG6 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
VPS50Q96JG6 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
VPS50Q96JG6 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC6.06□□□□□ -1.44
VPS50Q96JG6 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
VPS50Q96JG6 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC6.06□□□□□ -1.44
VPS50Q96JG6 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
VPS50Q96JG6 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
VPS50Q96JG6 BIN2P1-201ENST00000504996 1530 ntBASIC6.06□□□□□ -1.44
VPS50Q96JG6 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
VPS50Q96JG6 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC6.06□□□□□ -1.44
VPS50Q96JG6 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
VPS50Q96JG6 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
VPS50Q96JG6 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
VPS50Q96JG6 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
VPS50Q96JG6 SNORD16-201ENST00000362803 99 ntBASIC6.06□□□□□ -1.44
VPS50Q96JG6 MIR1275-201ENST00000408770 80 ntBASIC6.06□□□□□ -1.44
VPS50Q96JG6 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC6.06□□□□□ -1.44
VPS50Q96JG6 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC6.06□□□□□ -1.44
VPS50Q96JG6 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC6.06□□□□□ -1.44
VPS50Q96JG6 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC6.06□□□□□ -1.44
VPS50Q96JG6 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC6.06□□□□□ -1.44
VPS50Q96JG6 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC6.06□□□□□ -1.44
VPS50Q96JG6 AL354766.1-201ENST00000423396 542 ntBASIC6.06□□□□□ -1.44
VPS50Q96JG6 PRUNEP1-201ENST00000425846 705 ntBASIC6.06□□□□□ -1.44
VPS50Q96JG6 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC6.06□□□□□ -1.44
VPS50Q96JG6 AC083862.1-201ENST00000427378 1242 ntBASIC6.06□□□□□ -1.44
VPS50Q96JG6 ZNF965P-201ENST00000432501 817 ntBASIC6.06□□□□□ -1.44
VPS50Q96JG6 MTND2P21-201ENST00000436242 1042 ntBASIC6.06□□□□□ -1.44
VPS50Q96JG6 AL513321.1-201ENST00000441175 761 ntBASIC6.06□□□□□ -1.44
VPS50Q96JG6 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC6.06□□□□□ -1.44
VPS50Q96JG6 AL645936.1-201ENST00000441979 518 ntBASIC6.06□□□□□ -1.44
VPS50Q96JG6 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC6.06□□□□□ -1.44
VPS50Q96JG6 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC6.06□□□□□ -1.44
VPS50Q96JG6 AC103563.5-201ENST00000455643 364 ntBASIC6.06□□□□□ -1.44
VPS50Q96JG6 OR7E22P-201ENST00000478335 1035 ntBASIC6.06□□□□□ -1.44
VPS50Q96JG6 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
VPS50Q96JG6 AP002453.1-201ENST00000492327 668 ntBASIC6.06□□□□□ -1.44
VPS50Q96JG6 PFN1P8-201ENST00000497012 543 ntBASIC6.06□□□□□ -1.44
VPS50Q96JG6 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
VPS50Q96JG6 AC018645.1-201ENST00000505003 109 ntBASIC6.06□□□□□ -1.44
VPS50Q96JG6 NAMPTP2-201ENST00000505629 1115 ntBASIC6.06□□□□□ -1.44
VPS50Q96JG6 AC091874.2-201ENST00000505889 720 ntBASIC6.06□□□□□ -1.44
VPS50Q96JG6 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC6.06□□□□□ -1.44
VPS50Q96JG6 HMGB1P47-201ENST00000511281 589 ntBASIC6.06□□□□□ -1.44
VPS50Q96JG6 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
VPS50Q96JG6 AC022826.1-201ENST00000519383 805 ntBASIC6.06□□□□□ -1.44
VPS50Q96JG6 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC6.06□□□□□ -1.44
VPS50Q96JG6 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC6.06□□□□□ -1.44
VPS50Q96JG6 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC6.06□□□□□ -1.44
VPS50Q96JG6 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC6.06□□□□□ -1.44
VPS50Q96JG6 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC6.06□□□□□ -1.44
VPS50Q96JG6 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC6.06□□□□□ -1.44
VPS50Q96JG6 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.06□□□□□ -1.44
VPS50Q96JG6 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
VPS50Q96JG6 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC6.06□□□□□ -1.44
VPS50Q96JG6 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC6.06□□□□□ -1.44
VPS50Q96JG6 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
VPS50Q96JG6 APOC2-205ENST00000592257 444 ntTSL 3 BASIC6.06□□□□□ -1.44
VPS50Q96JG6 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
VPS50Q96JG6 AC079315.1-201ENST00000602952 623 ntBASIC6.06□□□□□ -1.44
VPS50Q96JG6 AC090912.3-201ENST00000609775 533 ntBASIC6.06□□□□□ -1.44
VPS50Q96JG6 uc_338.31-201ENST00000615595 186 ntBASIC6.06□□□□□ -1.44
VPS50Q96JG6 AC025016.1-201ENST00000616746 682 ntBASIC6.06□□□□□ -1.44
VPS50Q96JG6 AP000943.4-201ENST00000622912 357 ntBASIC6.06□□□□□ -1.44
VPS50Q96JG6 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC6.06□□□□□ -1.44
VPS50Q96JG6 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC6.06□□□□□ -1.44
VPS50Q96JG6 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC6.06□□□□□ -1.44
VPS50Q96JG6 MAPK10-350ENST00000641777 965 ntBASIC6.06□□□□□ -1.44
VPS50Q96JG6 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
VPS50Q96JG6 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC6.06□□□□□ -1.44
VPS50Q96JG6 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
VPS50Q96JG6 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.06□□□□□ -1.44
VPS50Q96JG6 AL121839.2-201ENST00000565058 6943 ntBASIC6.06□□□□□ -1.44
VPS50Q96JG6 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
VPS50Q96JG6 AC007842.1-201ENST00000597336 2039 ntBASIC6.06□□□□□ -1.44
VPS50Q96JG6 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.06□□□□□ -1.44
VPS50Q96JG6 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms