Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.7□□□□□ -1.5
ECHDC3Q96DC8 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC5.7□□□□□ -1.5
ECHDC3Q96DC8 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
ECHDC3Q96DC8 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
ECHDC3Q96DC8 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
ECHDC3Q96DC8 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
ECHDC3Q96DC8 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.7□□□□□ -1.5
ECHDC3Q96DC8 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
ECHDC3Q96DC8 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
ECHDC3Q96DC8 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
ECHDC3Q96DC8 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
ECHDC3Q96DC8 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.7□□□□□ -1.5
ECHDC3Q96DC8 OR2AT2P-201ENST00000413438 905 ntBASIC5.7□□□□□ -1.5
ECHDC3Q96DC8 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
ECHDC3Q96DC8 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.7□□□□□ -1.5
ECHDC3Q96DC8 AC117434.1-201ENST00000419971 836 ntBASIC5.7□□□□□ -1.5
ECHDC3Q96DC8 REREP1Y-201ENST00000422655 198 ntBASIC5.7□□□□□ -1.5
ECHDC3Q96DC8 CHEK2P5-201ENST00000423877 246 ntBASIC5.7□□□□□ -1.5
ECHDC3Q96DC8 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.7□□□□□ -1.5
ECHDC3Q96DC8 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.7□□□□□ -1.5
ECHDC3Q96DC8 REREP2Y-201ENST00000439103 200 ntBASIC5.7□□□□□ -1.5
ECHDC3Q96DC8 AL391987.1-201ENST00000441025 200 ntBASIC5.7□□□□□ -1.5
ECHDC3Q96DC8 EEF1B2P6-201ENST00000445713 673 ntBASIC5.7□□□□□ -1.5
ECHDC3Q96DC8 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
ECHDC3Q96DC8 MEMO1P4-201ENST00000453590 386 ntBASIC5.7□□□□□ -1.5
ECHDC3Q96DC8 AC026782.2-201ENST00000510845 636 ntBASIC5.7□□□□□ -1.5
ECHDC3Q96DC8 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.7□□□□□ -1.5
ECHDC3Q96DC8 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.7□□□□□ -1.5
ECHDC3Q96DC8 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.7□□□□□ -1.5
ECHDC3Q96DC8 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.7□□□□□ -1.5
ECHDC3Q96DC8 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
ECHDC3Q96DC8 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.7□□□□□ -1.5
ECHDC3Q96DC8 MIR4505-201ENST00000582238 73 ntBASIC5.7□□□□□ -1.5
ECHDC3Q96DC8 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.7□□□□□ -1.5
ECHDC3Q96DC8 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC5.7□□□□□ -1.5
ECHDC3Q96DC8 LSM1P2-201ENST00000604911 322 ntBASIC5.7□□□□□ -1.5
ECHDC3Q96DC8 AL034374.2-201ENST00000605281 548 ntBASIC5.7□□□□□ -1.5
ECHDC3Q96DC8 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC5.7□□□□□ -1.5
ECHDC3Q96DC8 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.7□□□□□ -1.5
ECHDC3Q96DC8 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.7□□□□□ -1.5
ECHDC3Q96DC8 AL390318.1-201ENST00000624564 687 ntBASIC5.7□□□□□ -1.5
ECHDC3Q96DC8 AC007683.2-201ENST00000624681 714 ntBASIC5.7□□□□□ -1.5
ECHDC3Q96DC8 AC069542.2-201ENST00000624816 216 ntBASIC5.7□□□□□ -1.5
ECHDC3Q96DC8 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
ECHDC3Q96DC8 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
ECHDC3Q96DC8 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
ECHDC3Q96DC8 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
ECHDC3Q96DC8 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
ECHDC3Q96DC8 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.7□□□□□ -1.5
ECHDC3Q96DC8 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.7□□□□□ -1.5
ECHDC3Q96DC8 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
ECHDC3Q96DC8 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
ECHDC3Q96DC8 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
ECHDC3Q96DC8 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
ECHDC3Q96DC8 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
ECHDC3Q96DC8 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
ECHDC3Q96DC8 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
ECHDC3Q96DC8 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
ECHDC3Q96DC8 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
ECHDC3Q96DC8 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC5.69□□□□□ -1.5
ECHDC3Q96DC8 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.69□□□□□ -1.5
ECHDC3Q96DC8 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.69□□□□□ -1.5
ECHDC3Q96DC8 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
ECHDC3Q96DC8 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
ECHDC3Q96DC8 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.69□□□□□ -1.5
ECHDC3Q96DC8 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.69□□□□□ -1.5
ECHDC3Q96DC8 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
ECHDC3Q96DC8 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
ECHDC3Q96DC8 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.69□□□□□ -1.5
ECHDC3Q96DC8 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
ECHDC3Q96DC8 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
ECHDC3Q96DC8 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
ECHDC3Q96DC8 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
ECHDC3Q96DC8 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
ECHDC3Q96DC8 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.69□□□□□ -1.5
ECHDC3Q96DC8 RNU1-136P-201ENST00000384181 164 ntBASIC5.69□□□□□ -1.5
ECHDC3Q96DC8 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
ECHDC3Q96DC8 AL391422.1-201ENST00000402155 436 ntBASIC5.69□□□□□ -1.5
ECHDC3Q96DC8 RN7SKP206-201ENST00000410823 293 ntBASIC5.69□□□□□ -1.5
ECHDC3Q96DC8 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC5.69□□□□□ -1.5
ECHDC3Q96DC8 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.69□□□□□ -1.5
ECHDC3Q96DC8 DPPA2P2-201ENST00000418220 897 ntBASIC5.69□□□□□ -1.5
ECHDC3Q96DC8 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.69□□□□□ -1.5
ECHDC3Q96DC8 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.69□□□□□ -1.5
ECHDC3Q96DC8 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.69□□□□□ -1.5
ECHDC3Q96DC8 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.69□□□□□ -1.5
ECHDC3Q96DC8 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC5.69□□□□□ -1.5
ECHDC3Q96DC8 AC006335.2-201ENST00000437993 330 ntBASIC5.69□□□□□ -1.5
ECHDC3Q96DC8 AC073909.1-201ENST00000447112 999 ntBASIC5.69□□□□□ -1.5
ECHDC3Q96DC8 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
ECHDC3Q96DC8 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.69□□□□□ -1.5
ECHDC3Q96DC8 RN7SL72P-201ENST00000460697 269 ntBASIC5.69□□□□□ -1.5
ECHDC3Q96DC8 RN7SL717P-201ENST00000478343 297 ntBASIC5.69□□□□□ -1.5
ECHDC3Q96DC8 DUTP7-201ENST00000507982 486 ntBASIC5.69□□□□□ -1.5
ECHDC3Q96DC8 IGLV3-24-201ENST00000517477 197 ntBASIC5.69□□□□□ -1.5
ECHDC3Q96DC8 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC5.69□□□□□ -1.5
ECHDC3Q96DC8 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.69□□□□□ -1.5
ECHDC3Q96DC8 AC022404.1-201ENST00000555320 273 ntBASIC5.69□□□□□ -1.5
ECHDC3Q96DC8 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.69□□□□□ -1.5
ECHDC3Q96DC8 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms