Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RTN4IP1Q8WWV3 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC4.77□□□□□ -1.65
RTN4IP1Q8WWV3 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC4.77□□□□□ -1.65
RTN4IP1Q8WWV3 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RTN4IP1Q8WWV3 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RTN4IP1Q8WWV3 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
RTN4IP1Q8WWV3 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC4.76□□□□□ -1.65
RTN4IP1Q8WWV3 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RTN4IP1Q8WWV3 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
RTN4IP1Q8WWV3 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RTN4IP1Q8WWV3 AC002525.1-201ENST00000624392 1622 ntBASIC4.76□□□□□ -1.65
RTN4IP1Q8WWV3 AC027088.4-201ENST00000611559 1947 ntBASIC4.76□□□□□ -1.65
RTN4IP1Q8WWV3 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RTN4IP1Q8WWV3 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC4.76□□□□□ -1.65
RTN4IP1Q8WWV3 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
RTN4IP1Q8WWV3 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.76□□□□□ -1.65
RTN4IP1Q8WWV3 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
RTN4IP1Q8WWV3 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RTN4IP1Q8WWV3 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RTN4IP1Q8WWV3 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
RTN4IP1Q8WWV3 U3.28-201ENST00000391249 210 ntBASIC4.76□□□□□ -1.65
RTN4IP1Q8WWV3 AC099535.1-201ENST00000408928 371 ntBASIC4.76□□□□□ -1.65
RTN4IP1Q8WWV3 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC4.76□□□□□ -1.65
RTN4IP1Q8WWV3 AC009784.1-201ENST00000426484 460 ntBASIC4.76□□□□□ -1.65
RTN4IP1Q8WWV3 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC4.76□□□□□ -1.65
RTN4IP1Q8WWV3 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC4.76□□□□□ -1.65
RTN4IP1Q8WWV3 RPL5P25-201ENST00000441148 775 ntBASIC4.76□□□□□ -1.65
RTN4IP1Q8WWV3 PPIA-203ENST00000451562 544 ntTSL 2 BASIC4.76□□□□□ -1.65
RTN4IP1Q8WWV3 CBX1P2-201ENST00000453841 458 ntBASIC4.76□□□□□ -1.65
RTN4IP1Q8WWV3 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC4.76□□□□□ -1.65
RTN4IP1Q8WWV3 CST12P-201ENST00000457644 362 ntBASIC4.76□□□□□ -1.65
RTN4IP1Q8WWV3 AP002884.1-201ENST00000479691 655 ntBASIC4.76□□□□□ -1.65
RTN4IP1Q8WWV3 AC099521.1-201ENST00000482557 334 ntBASIC4.76□□□□□ -1.65
RTN4IP1Q8WWV3 RN7SL170P-201ENST00000487098 295 ntBASIC4.76□□□□□ -1.65
RTN4IP1Q8WWV3 RPS17P5-201ENST00000498293 408 ntBASIC4.76□□□□□ -1.65
RTN4IP1Q8WWV3 GAPDHP71-201ENST00000511530 1003 ntBASIC4.76□□□□□ -1.65
RTN4IP1Q8WWV3 RNU4ATAC18P-201ENST00000516179 126 ntBASIC4.76□□□□□ -1.65
RTN4IP1Q8WWV3 RNA5SP473-201ENST00000516402 125 ntBASIC4.76□□□□□ -1.65
RTN4IP1Q8WWV3 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC4.76□□□□□ -1.65
RTN4IP1Q8WWV3 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC4.76□□□□□ -1.65
RTN4IP1Q8WWV3 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC4.76□□□□□ -1.65
RTN4IP1Q8WWV3 AC024405.1-201ENST00000532521 1042 ntBASIC4.76□□□□□ -1.65
RTN4IP1Q8WWV3 AC079905.1-201ENST00000549280 475 ntBASIC4.76□□□□□ -1.65
RTN4IP1Q8WWV3 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC4.76□□□□□ -1.65
RTN4IP1Q8WWV3 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC4.76□□□□□ -1.65
RTN4IP1Q8WWV3 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC4.76□□□□□ -1.65
RTN4IP1Q8WWV3 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC4.76□□□□□ -1.65
RTN4IP1Q8WWV3 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC4.76□□□□□ -1.65
RTN4IP1Q8WWV3 AF287957.1-201ENST00000607368 1595 ntBASIC4.76□□□□□ -1.65
RTN4IP1Q8WWV3 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC4.76□□□□□ -1.65
RTN4IP1Q8WWV3 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC4.76□□□□□ -1.65
RTN4IP1Q8WWV3 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
RTN4IP1Q8WWV3 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
RTN4IP1Q8WWV3 HSPD1P7-201ENST00000447985 1686 ntBASIC4.76□□□□□ -1.65
RTN4IP1Q8WWV3 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC4.76□□□□□ -1.65
RTN4IP1Q8WWV3 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
RTN4IP1Q8WWV3 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
RTN4IP1Q8WWV3 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
RTN4IP1Q8WWV3 AP000473.2-201ENST00000602659 1537 ntBASIC4.76□□□□□ -1.65
RTN4IP1Q8WWV3 AC125336.1-201ENST00000508893 2827 ntBASIC4.76□□□□□ -1.65
RTN4IP1Q8WWV3 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RTN4IP1Q8WWV3 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.76□□□□□ -1.65
RTN4IP1Q8WWV3 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RTN4IP1Q8WWV3 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RTN4IP1Q8WWV3 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RTN4IP1Q8WWV3 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC4.76□□□□□ -1.65
RTN4IP1Q8WWV3 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC4.75□□□□□ -1.65
RTN4IP1Q8WWV3 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC4.75□□□□□ -1.65
RTN4IP1Q8WWV3 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RTN4IP1Q8WWV3 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RTN4IP1Q8WWV3 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RTN4IP1Q8WWV3 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
RTN4IP1Q8WWV3 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RTN4IP1Q8WWV3 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RTN4IP1Q8WWV3 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
RTN4IP1Q8WWV3 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC4.75□□□□□ -1.65
RTN4IP1Q8WWV3 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.75□□□□□ -1.65
RTN4IP1Q8WWV3 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RTN4IP1Q8WWV3 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
RTN4IP1Q8WWV3 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC4.75□□□□□ -1.65
RTN4IP1Q8WWV3 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
RTN4IP1Q8WWV3 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC4.75□□□□□ -1.65
RTN4IP1Q8WWV3 BX284632.2-201ENST00000421091 399 ntBASIC4.75□□□□□ -1.65
RTN4IP1Q8WWV3 DEFA9P-201ENST00000433042 285 ntBASIC4.75□□□□□ -1.65
RTN4IP1Q8WWV3 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
RTN4IP1Q8WWV3 AL512605.1-202ENST00000441919 381 ntBASIC4.75□□□□□ -1.65
RTN4IP1Q8WWV3 AL359955.2-201ENST00000445380 353 ntBASIC4.75□□□□□ -1.65
RTN4IP1Q8WWV3 OR7E116P-201ENST00000448529 957 ntBASIC4.75□□□□□ -1.65
RTN4IP1Q8WWV3 PSAT1P4-201ENST00000466500 526 ntBASIC4.75□□□□□ -1.65
RTN4IP1Q8WWV3 AL122020.1-201ENST00000472287 459 ntBASIC4.75□□□□□ -1.65
RTN4IP1Q8WWV3 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RTN4IP1Q8WWV3 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
RTN4IP1Q8WWV3 RN7SL193P-201ENST00000491708 276 ntBASIC4.75□□□□□ -1.65
RTN4IP1Q8WWV3 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC4.75□□□□□ -1.65
RTN4IP1Q8WWV3 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC4.75□□□□□ -1.65
RTN4IP1Q8WWV3 NPM1P21-201ENST00000513394 762 ntBASIC4.75□□□□□ -1.65
RTN4IP1Q8WWV3 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
RTN4IP1Q8WWV3 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC4.75□□□□□ -1.65
RTN4IP1Q8WWV3 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC4.75□□□□□ -1.65
RTN4IP1Q8WWV3 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms