Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HMGB4Q8WW32 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC6.08□□□□□ -1.44
HMGB4Q8WW32 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
HMGB4Q8WW32 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HMGB4Q8WW32 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HMGB4Q8WW32 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
HMGB4Q8WW32 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HMGB4Q8WW32 AL136520.1-201ENST00000600311 1322 ntBASIC6.08□□□□□ -1.44
HMGB4Q8WW32 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HMGB4Q8WW32 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
HMGB4Q8WW32 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HMGB4Q8WW32 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HMGB4Q8WW32 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HMGB4Q8WW32 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HMGB4Q8WW32 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
HMGB4Q8WW32 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HMGB4Q8WW32 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
HMGB4Q8WW32 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC6.08□□□□□ -1.44
HMGB4Q8WW32 MIR375-201ENST00000362103 64 ntBASIC6.08□□□□□ -1.44
HMGB4Q8WW32 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC6.08□□□□□ -1.44
HMGB4Q8WW32 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC6.08□□□□□ -1.44
HMGB4Q8WW32 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
HMGB4Q8WW32 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
HMGB4Q8WW32 RN7SKP293-201ENST00000411389 296 ntBASIC6.08□□□□□ -1.44
HMGB4Q8WW32 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC6.08□□□□□ -1.44
HMGB4Q8WW32 Z93019.1-201ENST00000416450 973 ntBASIC6.08□□□□□ -1.44
HMGB4Q8WW32 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC6.08□□□□□ -1.44
HMGB4Q8WW32 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC6.08□□□□□ -1.44
HMGB4Q8WW32 RPS15AP30-201ENST00000420976 390 ntBASIC6.08□□□□□ -1.44
HMGB4Q8WW32 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC6.08□□□□□ -1.44
HMGB4Q8WW32 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC6.08□□□□□ -1.44
HMGB4Q8WW32 AC126120.1-201ENST00000431082 470 ntBASIC6.08□□□□□ -1.44
HMGB4Q8WW32 RPS26P4-201ENST00000431743 355 ntBASIC6.08□□□□□ -1.44
HMGB4Q8WW32 AL606490.7-201ENST00000433136 191 ntBASIC6.08□□□□□ -1.44
HMGB4Q8WW32 KRTAP8-2P-201ENST00000440620 186 ntBASIC6.08□□□□□ -1.44
HMGB4Q8WW32 AL512593.1-201ENST00000444758 779 ntBASIC6.08□□□□□ -1.44
HMGB4Q8WW32 RPS27AP2-201ENST00000457576 465 ntBASIC6.08□□□□□ -1.44
HMGB4Q8WW32 AC073594.1-201ENST00000462065 364 ntBASIC6.08□□□□□ -1.44
HMGB4Q8WW32 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC6.08□□□□□ -1.44
HMGB4Q8WW32 RPS26P39-201ENST00000469206 341 ntBASIC6.08□□□□□ -1.44
HMGB4Q8WW32 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HMGB4Q8WW32 CYCSP22-201ENST00000517555 339 ntBASIC6.08□□□□□ -1.44
HMGB4Q8WW32 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC6.08□□□□□ -1.44
HMGB4Q8WW32 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC6.08□□□□□ -1.44
HMGB4Q8WW32 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC6.08□□□□□ -1.44
HMGB4Q8WW32 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HMGB4Q8WW32 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC6.08□□□□□ -1.44
HMGB4Q8WW32 AC027667.1-201ENST00000545814 304 ntBASIC6.08□□□□□ -1.44
HMGB4Q8WW32 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC6.08□□□□□ -1.44
HMGB4Q8WW32 DPPA3P2-201ENST00000553589 478 ntBASIC6.08□□□□□ -1.44
HMGB4Q8WW32 AC091078.2-201ENST00000557145 559 ntBASIC6.08□□□□□ -1.44
HMGB4Q8WW32 AC106785.3-201ENST00000564064 847 ntBASIC6.08□□□□□ -1.44
HMGB4Q8WW32 AC079148.1-201ENST00000565944 819 ntBASIC6.08□□□□□ -1.44
HMGB4Q8WW32 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC6.08□□□□□ -1.44
HMGB4Q8WW32 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
HMGB4Q8WW32 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
HMGB4Q8WW32 MIR4489-201ENST00000578869 62 ntBASIC6.08□□□□□ -1.44
HMGB4Q8WW32 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC6.08□□□□□ -1.44
HMGB4Q8WW32 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HMGB4Q8WW32 RPL12P48-201ENST00000605620 304 ntBASIC6.08□□□□□ -1.44
HMGB4Q8WW32 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC6.08□□□□□ -1.44
HMGB4Q8WW32 AC025016.1-201ENST00000616746 682 ntBASIC6.08□□□□□ -1.44
HMGB4Q8WW32 AC116667.2-201ENST00000641075 823 ntBASIC6.08□□□□□ -1.44
HMGB4Q8WW32 MIR193BHG-214ENST00000641765 509 ntBASIC6.08□□□□□ -1.44
HMGB4Q8WW32 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HMGB4Q8WW32 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
HMGB4Q8WW32 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
HMGB4Q8WW32 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
HMGB4Q8WW32 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
HMGB4Q8WW32 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HMGB4Q8WW32 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC6.08□□□□□ -1.44
HMGB4Q8WW32 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC6.08□□□□□ -1.44
HMGB4Q8WW32 AC011815.2-201ENST00000618230 2021 ntBASIC6.08□□□□□ -1.44
HMGB4Q8WW32 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HMGB4Q8WW32 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HMGB4Q8WW32 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
HMGB4Q8WW32 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
HMGB4Q8WW32 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
HMGB4Q8WW32 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
HMGB4Q8WW32 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.07□□□□□ -1.44
HMGB4Q8WW32 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC6.07□□□□□ -1.44
HMGB4Q8WW32 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
HMGB4Q8WW32 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
HMGB4Q8WW32 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
HMGB4Q8WW32 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
HMGB4Q8WW32 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HMGB4Q8WW32 RNU105B-201ENST00000364478 208 ntBASIC6.07□□□□□ -1.44
HMGB4Q8WW32 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
HMGB4Q8WW32 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
HMGB4Q8WW32 RNU6-316P-201ENST00000391027 107 ntBASIC6.07□□□□□ -1.44
HMGB4Q8WW32 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC6.07□□□□□ -1.44
HMGB4Q8WW32 RPL35AP3-201ENST00000414680 288 ntBASIC6.07□□□□□ -1.44
HMGB4Q8WW32 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC6.07□□□□□ -1.44
HMGB4Q8WW32 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC6.07□□□□□ -1.44
HMGB4Q8WW32 BRWD1P3-201ENST00000428816 390 ntBASIC6.07□□□□□ -1.44
HMGB4Q8WW32 MTND2P21-201ENST00000436242 1042 ntBASIC6.07□□□□□ -1.44
HMGB4Q8WW32 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC6.07□□□□□ -1.44
HMGB4Q8WW32 BMS1P10-201ENST00000443754 1120 ntBASIC6.07□□□□□ -1.44
HMGB4Q8WW32 GXYLT1P1-201ENST00000446657 490 ntBASIC6.07□□□□□ -1.44
HMGB4Q8WW32 MTND6P5-201ENST00000448266 512 ntBASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 167.9 ms