Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC3.73□□□□□ -1.81
ALMS1Q8TCU4 NUDT19P3-201ENST00000404698 555 ntBASIC3.73□□□□□ -1.81
ALMS1Q8TCU4 AL451063.1-201ENST00000450164 1133 ntBASIC3.73□□□□□ -1.81
ALMS1Q8TCU4 snoU13.20-201ENST00000459180 104 ntBASIC3.73□□□□□ -1.81
ALMS1Q8TCU4 C1GALT1P3-201ENST00000522049 819 ntBASIC3.73□□□□□ -1.81
ALMS1Q8TCU4 AC007494.1-201ENST00000562293 760 ntBASIC3.73□□□□□ -1.81
ALMS1Q8TCU4 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC3.73□□□□□ -1.81
ALMS1Q8TCU4 AC011453.2-201ENST00000603737 729 ntBASIC3.73□□□□□ -1.81
ALMS1Q8TCU4 AL031320.1-201ENST00000604177 357 ntBASIC3.73□□□□□ -1.81
ALMS1Q8TCU4 AC015660.5-201ENST00000623238 564 ntBASIC3.73□□□□□ -1.81
ALMS1Q8TCU4 AC091905.4-201ENST00000623432 202 ntBASIC3.73□□□□□ -1.81
ALMS1Q8TCU4 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
ALMS1Q8TCU4 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC3.73□□□□□ -1.81
ALMS1Q8TCU4 AC107398.3-201ENST00000562284 7000 ntBASIC3.73□□□□□ -1.81
ALMS1Q8TCU4 OPCML-203ENST00000524381 6424 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
ALMS1Q8TCU4 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
ALMS1Q8TCU4 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
ALMS1Q8TCU4 ZNF229-204ENST00000614049 4507 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
ALMS1Q8TCU4 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
ALMS1Q8TCU4 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
ALMS1Q8TCU4 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
ALMS1Q8TCU4 MAP3K9-207ENST00000611979 10497 ntTSL 5 BASIC3.73□□□□□ -1.81
ALMS1Q8TCU4 MIPEPP2-201ENST00000422560 1819 ntBASIC3.73□□□□□ -1.81
ALMS1Q8TCU4 RNA5SP515-201ENST00000364570 118 ntBASIC3.73□□□□□ -1.81
ALMS1Q8TCU4 SNORA67-201ENST00000384423 137 ntBASIC3.73□□□□□ -1.81
ALMS1Q8TCU4 AC013442.1-201ENST00000397347 228 ntBASIC3.73□□□□□ -1.81
ALMS1Q8TCU4 RPL10P10-201ENST00000403509 664 ntBASIC3.73□□□□□ -1.81
ALMS1Q8TCU4 RN7SKP100-201ENST00000411258 284 ntBASIC3.73□□□□□ -1.81
ALMS1Q8TCU4 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC3.73□□□□□ -1.81
ALMS1Q8TCU4 AC093414.1-201ENST00000434712 514 ntBASIC3.73□□□□□ -1.81
ALMS1Q8TCU4 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC3.73□□□□□ -1.81
ALMS1Q8TCU4 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC3.73□□□□□ -1.81
ALMS1Q8TCU4 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC3.73□□□□□ -1.81
ALMS1Q8TCU4 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC3.73□□□□□ -1.81
ALMS1Q8TCU4 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC3.73□□□□□ -1.81
ALMS1Q8TCU4 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
ALMS1Q8TCU4 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC3.73□□□□□ -1.81
ALMS1Q8TCU4 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC3.73□□□□□ -1.81
ALMS1Q8TCU4 BGLT3-201ENST00000564523 994 ntBASIC3.73□□□□□ -1.81
ALMS1Q8TCU4 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC3.73□□□□□ -1.81
ALMS1Q8TCU4 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC3.73□□□□□ -1.81
ALMS1Q8TCU4 OR52H1-202ENST00000641796 1061 ntBASIC3.73□□□□□ -1.81
ALMS1Q8TCU4 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC3.73□□□□□ -1.81
ALMS1Q8TCU4 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC3.73□□□□□ -1.81
ALMS1Q8TCU4 AC006206.1-201ENST00000544842 3387 ntBASIC3.73□□□□□ -1.81
ALMS1Q8TCU4 PPP2R2B-202ENST00000394409 10704 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
ALMS1Q8TCU4 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
ALMS1Q8TCU4 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
ALMS1Q8TCU4 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
ALMS1Q8TCU4 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
ALMS1Q8TCU4 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
ALMS1Q8TCU4 DBIP1-201ENST00000401435 260 ntBASIC3.73□□□□□ -1.81
ALMS1Q8TCU4 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC3.73□□□□□ -1.81
ALMS1Q8TCU4 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC3.73□□□□□ -1.81
ALMS1Q8TCU4 AC007537.2-201ENST00000472093 511 ntBASIC3.73□□□□□ -1.81
ALMS1Q8TCU4 DUBR-205ENST00000495228 411 ntTSL 2 BASIC3.73□□□□□ -1.81
ALMS1Q8TCU4 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC3.73□□□□□ -1.81
ALMS1Q8TCU4 IGLV3-24-201ENST00000517477 197 ntBASIC3.73□□□□□ -1.81
ALMS1Q8TCU4 AC021006.3-201ENST00000530771 192 ntBASIC3.73□□□□□ -1.81
ALMS1Q8TCU4 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC3.73□□□□□ -1.81
ALMS1Q8TCU4 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC3.73□□□□□ -1.81
ALMS1Q8TCU4 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC3.73□□□□□ -1.81
ALMS1Q8TCU4 MIR132-201ENST00000591554 101 ntBASIC3.73□□□□□ -1.81
ALMS1Q8TCU4 MIR6780A-201ENST00000615089 68 ntBASIC3.73□□□□□ -1.81
ALMS1Q8TCU4 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
ALMS1Q8TCU4 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
ALMS1Q8TCU4 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
ALMS1Q8TCU4 GON4L-218ENST00000620426 5506 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
ALMS1Q8TCU4 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
ALMS1Q8TCU4 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
ALMS1Q8TCU4 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.72□□□□□ -1.81
ALMS1Q8TCU4 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
ALMS1Q8TCU4 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC3.72□□□□□ -1.81
ALMS1Q8TCU4 ADA2-203ENST00000399837 4505 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
ALMS1Q8TCU4 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
ALMS1Q8TCU4 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
ALMS1Q8TCU4 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
ALMS1Q8TCU4 DDX46-201ENST00000354283 3821 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
ALMS1Q8TCU4 AC245028.1-201ENST00000423259 256 ntBASIC3.72□□□□□ -1.81
ALMS1Q8TCU4 GTF2IP2-201ENST00000424290 697 ntBASIC3.72□□□□□ -1.81
ALMS1Q8TCU4 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC3.72□□□□□ -1.81
ALMS1Q8TCU4 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC3.72□□□□□ -1.81
ALMS1Q8TCU4 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC3.72□□□□□ -1.81
ALMS1Q8TCU4 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
ALMS1Q8TCU4 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC3.72□□□□□ -1.81
ALMS1Q8TCU4 ASB8-204ENST00000536071 568 ntTSL 4 BASIC3.72□□□□□ -1.81
ALMS1Q8TCU4 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC3.72□□□□□ -1.81
ALMS1Q8TCU4 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC3.72□□□□□ -1.81
ALMS1Q8TCU4 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
ALMS1Q8TCU4 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC3.72□□□□□ -1.81
ALMS1Q8TCU4 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC3.72□□□□□ -1.81
ALMS1Q8TCU4 AP000919.1-201ENST00000582850 985 ntBASIC3.72□□□□□ -1.81
ALMS1Q8TCU4 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
ALMS1Q8TCU4 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
ALMS1Q8TCU4 NAV2-213ENST00000533917 5084 ntTSL 2 BASIC3.72□□□□□ -1.81
ALMS1Q8TCU4 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC3.72□□□□□ -1.81
ALMS1Q8TCU4 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
ALMS1Q8TCU4 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
ALMS1Q8TCU4 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC3.72□□□□□ -1.81
ALMS1Q8TCU4 EIF4E3-204ENST00000425534 9949 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms