Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 AC010240.2-201ENST00000445363 1205 ntBASIC5.53□□□□□ -1.52
CLIP4Q8N3C7 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC5.53□□□□□ -1.52
CLIP4Q8N3C7 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CLIP4Q8N3C7 AC016027.4-201ENST00000450866 277 ntBASIC5.53□□□□□ -1.52
CLIP4Q8N3C7 KF459542.1-201ENST00000450908 553 ntBASIC5.53□□□□□ -1.52
CLIP4Q8N3C7 OR6C72P-201ENST00000451403 892 ntBASIC5.53□□□□□ -1.52
CLIP4Q8N3C7 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC5.53□□□□□ -1.52
CLIP4Q8N3C7 AC002553.3-201ENST00000453002 341 ntBASIC5.53□□□□□ -1.52
CLIP4Q8N3C7 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC5.53□□□□□ -1.52
CLIP4Q8N3C7 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC5.53□□□□□ -1.52
CLIP4Q8N3C7 RNU7-157P-201ENST00000459600 66 ntBASIC5.53□□□□□ -1.52
CLIP4Q8N3C7 RN7SL836P-201ENST00000476140 296 ntBASIC5.53□□□□□ -1.52
CLIP4Q8N3C7 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CLIP4Q8N3C7 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CLIP4Q8N3C7 AC016550.1-201ENST00000505348 785 ntBASIC5.53□□□□□ -1.52
CLIP4Q8N3C7 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC5.53□□□□□ -1.52
CLIP4Q8N3C7 CR383658.1-201ENST00000514609 734 ntBASIC5.53□□□□□ -1.52
CLIP4Q8N3C7 AC104997.1-201ENST00000519761 717 ntBASIC5.53□□□□□ -1.52
CLIP4Q8N3C7 OR56A7P-201ENST00000524865 941 ntBASIC5.53□□□□□ -1.52
CLIP4Q8N3C7 AP003102.1-201ENST00000525638 661 ntBASIC5.53□□□□□ -1.52
CLIP4Q8N3C7 AC134349.2-201ENST00000535136 910 ntBASIC5.53□□□□□ -1.52
CLIP4Q8N3C7 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CLIP4Q8N3C7 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC5.53□□□□□ -1.52
CLIP4Q8N3C7 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC5.53□□□□□ -1.52
CLIP4Q8N3C7 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC5.53□□□□□ -1.52
CLIP4Q8N3C7 MRPS21P8-201ENST00000569196 235 ntBASIC5.53□□□□□ -1.52
CLIP4Q8N3C7 MIR5010-201ENST00000582846 120 ntBASIC5.53□□□□□ -1.52
CLIP4Q8N3C7 MIR4701-201ENST00000583094 63 ntBASIC5.53□□□□□ -1.52
CLIP4Q8N3C7 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC5.53□□□□□ -1.52
CLIP4Q8N3C7 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC5.53□□□□□ -1.52
CLIP4Q8N3C7 AL645933.2-201ENST00000606743 1207 ntBASIC5.53□□□□□ -1.52
CLIP4Q8N3C7 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC5.53□□□□□ -1.52
CLIP4Q8N3C7 SNX18P12-201ENST00000624821 759 ntBASIC5.53□□□□□ -1.52
CLIP4Q8N3C7 AL357562.1-201ENST00000624911 609 ntBASIC5.53□□□□□ -1.52
CLIP4Q8N3C7 AC006453.5-201ENST00000636451 619 ntBASIC5.53□□□□□ -1.52
CLIP4Q8N3C7 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.53□□□□□ -1.52
CLIP4Q8N3C7 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC5.53□□□□□ -1.52
CLIP4Q8N3C7 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CLIP4Q8N3C7 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CLIP4Q8N3C7 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CLIP4Q8N3C7 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CLIP4Q8N3C7 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.53□□□□□ -1.52
CLIP4Q8N3C7 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
CLIP4Q8N3C7 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
CLIP4Q8N3C7 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CLIP4Q8N3C7 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC5.53□□□□□ -1.52
CLIP4Q8N3C7 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
CLIP4Q8N3C7 AL442128.2-201ENST00000620246 1824 ntBASIC5.53□□□□□ -1.52
CLIP4Q8N3C7 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CLIP4Q8N3C7 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.52□□□□□ -1.53
CLIP4Q8N3C7 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CLIP4Q8N3C7 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CLIP4Q8N3C7 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CLIP4Q8N3C7 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.52□□□□□ -1.53
CLIP4Q8N3C7 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC5.52□□□□□ -1.53
CLIP4Q8N3C7 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CLIP4Q8N3C7 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CLIP4Q8N3C7 RNU1-134P-201ENST00000362935 165 ntBASIC5.52□□□□□ -1.53
CLIP4Q8N3C7 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC5.52□□□□□ -1.53
CLIP4Q8N3C7 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
CLIP4Q8N3C7 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.52□□□□□ -1.53
CLIP4Q8N3C7 RNA5SP187-201ENST00000384400 119 ntBASIC5.52□□□□□ -1.53
CLIP4Q8N3C7 RN7SKP146-201ENST00000410242 334 ntBASIC5.52□□□□□ -1.53
CLIP4Q8N3C7 RPL12P12-201ENST00000424633 501 ntBASIC5.52□□□□□ -1.53
CLIP4Q8N3C7 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC5.52□□□□□ -1.53
CLIP4Q8N3C7 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CLIP4Q8N3C7 AC092865.3-201ENST00000425390 1026 ntBASIC5.52□□□□□ -1.53
CLIP4Q8N3C7 AC099782.1-201ENST00000425889 474 ntBASIC5.52□□□□□ -1.53
CLIP4Q8N3C7 RPSAP32-201ENST00000432681 526 ntBASIC5.52□□□□□ -1.53
CLIP4Q8N3C7 AC023141.3-201ENST00000436698 278 ntBASIC5.52□□□□□ -1.53
CLIP4Q8N3C7 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC5.52□□□□□ -1.53
CLIP4Q8N3C7 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC5.52□□□□□ -1.53
CLIP4Q8N3C7 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC5.52□□□□□ -1.53
CLIP4Q8N3C7 AC005017.1-201ENST00000482002 490 ntBASIC5.52□□□□□ -1.53
CLIP4Q8N3C7 RPL29P23-201ENST00000486188 442 ntBASIC5.52□□□□□ -1.53
CLIP4Q8N3C7 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.52□□□□□ -1.53
CLIP4Q8N3C7 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.52□□□□□ -1.53
CLIP4Q8N3C7 AC021146.10-201ENST00000515628 706 ntBASIC5.52□□□□□ -1.53
CLIP4Q8N3C7 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.52□□□□□ -1.53
CLIP4Q8N3C7 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC5.52□□□□□ -1.53
CLIP4Q8N3C7 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC5.52□□□□□ -1.53
CLIP4Q8N3C7 OR10D4P-201ENST00000525892 951 ntBASIC5.52□□□□□ -1.53
CLIP4Q8N3C7 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.52□□□□□ -1.53
CLIP4Q8N3C7 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC5.52□□□□□ -1.53
CLIP4Q8N3C7 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CLIP4Q8N3C7 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC5.52□□□□□ -1.53
CLIP4Q8N3C7 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC5.52□□□□□ -1.53
CLIP4Q8N3C7 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC5.52□□□□□ -1.53
CLIP4Q8N3C7 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.52□□□□□ -1.53
CLIP4Q8N3C7 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.52□□□□□ -1.53
CLIP4Q8N3C7 AC005479.3-201ENST00000602790 431 ntBASIC5.52□□□□□ -1.53
CLIP4Q8N3C7 BNIP3P31-201ENST00000604515 566 ntBASIC5.52□□□□□ -1.53
CLIP4Q8N3C7 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC5.52□□□□□ -1.53
CLIP4Q8N3C7 HTR1DP1-201ENST00000616500 888 ntBASIC5.52□□□□□ -1.53
CLIP4Q8N3C7 AC016957.2-201ENST00000616998 848 ntBASIC5.52□□□□□ -1.53
CLIP4Q8N3C7 AL512652.1-201ENST00000619006 500 ntBASIC5.52□□□□□ -1.53
CLIP4Q8N3C7 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC5.52□□□□□ -1.53
CLIP4Q8N3C7 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
CLIP4Q8N3C7 THAP12P9-201ENST00000503971 2360 ntBASIC5.52□□□□□ -1.53
CLIP4Q8N3C7 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms