Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC6.5□□□□□ -1.37
HERC6Q8IVU3 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
HERC6Q8IVU3 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
HERC6Q8IVU3 RNA5SP375-201ENST00000362975 119 ntBASIC6.5□□□□□ -1.37
HERC6Q8IVU3 TRIM60P17-201ENST00000415181 719 ntBASIC6.5□□□□□ -1.37
HERC6Q8IVU3 AK4P4-201ENST00000419465 646 ntBASIC6.5□□□□□ -1.37
HERC6Q8IVU3 CCNB1IP1P1-201ENST00000428976 839 ntBASIC6.5□□□□□ -1.37
HERC6Q8IVU3 RPS27P18-201ENST00000431701 247 ntBASIC6.5□□□□□ -1.37
HERC6Q8IVU3 CFL1P1-202ENST00000432948 411 ntBASIC6.5□□□□□ -1.37
HERC6Q8IVU3 EEF1B2P6-201ENST00000445713 673 ntBASIC6.5□□□□□ -1.37
HERC6Q8IVU3 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC6.5□□□□□ -1.37
HERC6Q8IVU3 MORF4L1P4-201ENST00000450245 976 ntBASIC6.5□□□□□ -1.37
HERC6Q8IVU3 HNRNPDLP2-201ENST00000455248 751 ntBASIC6.5□□□□□ -1.37
HERC6Q8IVU3 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
HERC6Q8IVU3 COPS8P2-201ENST00000473228 627 ntBASIC6.5□□□□□ -1.37
HERC6Q8IVU3 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
HERC6Q8IVU3 AC083795.1-201ENST00000491760 320 ntBASIC6.5□□□□□ -1.37
HERC6Q8IVU3 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC6.5□□□□□ -1.37
HERC6Q8IVU3 AC231760.1-201ENST00000498002 260 ntBASIC6.5□□□□□ -1.37
HERC6Q8IVU3 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC6.5□□□□□ -1.37
HERC6Q8IVU3 RNU6-760P-201ENST00000516078 97 ntBASIC6.5□□□□□ -1.37
HERC6Q8IVU3 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC6.5□□□□□ -1.37
HERC6Q8IVU3 HMGN2P36-201ENST00000529541 409 ntBASIC6.5□□□□□ -1.37
HERC6Q8IVU3 RPA2P3-201ENST00000533268 770 ntBASIC6.5□□□□□ -1.37
HERC6Q8IVU3 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
HERC6Q8IVU3 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC6.5□□□□□ -1.37
HERC6Q8IVU3 AC073916.1-201ENST00000545095 130 ntBASIC6.5□□□□□ -1.37
HERC6Q8IVU3 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC6.5□□□□□ -1.37
HERC6Q8IVU3 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC6.5□□□□□ -1.37
HERC6Q8IVU3 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC6.5□□□□□ -1.37
HERC6Q8IVU3 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC6.5□□□□□ -1.37
HERC6Q8IVU3 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC6.5□□□□□ -1.37
HERC6Q8IVU3 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC6.5□□□□□ -1.37
HERC6Q8IVU3 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC6.5□□□□□ -1.37
HERC6Q8IVU3 RN7SL544P-201ENST00000617232 284 ntBASIC6.5□□□□□ -1.37
HERC6Q8IVU3 WBP1LP8-201ENST00000617401 327 ntBASIC6.5□□□□□ -1.37
HERC6Q8IVU3 RN7SL763P-201ENST00000620922 284 ntBASIC6.5□□□□□ -1.37
HERC6Q8IVU3 AC021766.1-201ENST00000624404 741 ntBASIC6.5□□□□□ -1.37
HERC6Q8IVU3 AC087565.3-203ENST00000641018 837 ntBASIC6.5□□□□□ -1.37
HERC6Q8IVU3 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
HERC6Q8IVU3 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
HERC6Q8IVU3 AC007342.5-201ENST00000571340 2142 ntBASIC6.5□□□□□ -1.37
HERC6Q8IVU3 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
HERC6Q8IVU3 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
HERC6Q8IVU3 AL590763.1-201ENST00000398297 1545 ntBASIC6.5□□□□□ -1.37
HERC6Q8IVU3 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
HERC6Q8IVU3 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
HERC6Q8IVU3 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
HERC6Q8IVU3 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC6.49□□□□□ -1.37
HERC6Q8IVU3 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
HERC6Q8IVU3 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
HERC6Q8IVU3 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.49□□□□□ -1.37
HERC6Q8IVU3 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.49□□□□□ -1.37
HERC6Q8IVU3 TTC41P-205ENST00000551270 3963 ntBASIC6.49□□□□□ -1.37
HERC6Q8IVU3 OFD1P17-201ENST00000437639 3018 ntBASIC6.49□□□□□ -1.37
HERC6Q8IVU3 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC6.49□□□□□ -1.37
HERC6Q8IVU3 RN7SKP124-201ENST00000364730 341 ntBASIC6.49□□□□□ -1.37
HERC6Q8IVU3 MIR433-201ENST00000384837 93 ntBASIC6.49□□□□□ -1.37
HERC6Q8IVU3 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC6.49□□□□□ -1.37
HERC6Q8IVU3 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC6.49□□□□□ -1.37
HERC6Q8IVU3 CBX1P3-201ENST00000413296 527 ntBASIC6.49□□□□□ -1.37
HERC6Q8IVU3 UBE2V1P14-201ENST00000415815 558 ntBASIC6.49□□□□□ -1.37
HERC6Q8IVU3 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC6.49□□□□□ -1.37
HERC6Q8IVU3 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC6.49□□□□□ -1.37
HERC6Q8IVU3 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC6.49□□□□□ -1.37
HERC6Q8IVU3 AC012497.1-201ENST00000429392 575 ntBASIC6.49□□□□□ -1.37
HERC6Q8IVU3 MRPS21P3-201ENST00000436696 262 ntBASIC6.49□□□□□ -1.37
HERC6Q8IVU3 Z84478.1-201ENST00000438230 1219 ntBASIC6.49□□□□□ -1.37
HERC6Q8IVU3 AC092967.1-201ENST00000449016 481 ntBASIC6.49□□□□□ -1.37
HERC6Q8IVU3 RPL31P20-201ENST00000449593 360 ntBASIC6.49□□□□□ -1.37
HERC6Q8IVU3 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC6.49□□□□□ -1.37
HERC6Q8IVU3 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC6.49□□□□□ -1.37
HERC6Q8IVU3 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC6.49□□□□□ -1.37
HERC6Q8IVU3 APPL2-203ENST00000546731 684 ntTSL 2 BASIC6.49□□□□□ -1.37
HERC6Q8IVU3 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC6.49□□□□□ -1.37
HERC6Q8IVU3 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
HERC6Q8IVU3 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
HERC6Q8IVU3 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC6.49□□□□□ -1.37
HERC6Q8IVU3 IMMP1LP3-201ENST00000604197 224 ntBASIC6.49□□□□□ -1.37
HERC6Q8IVU3 AC015802.5-201ENST00000607478 399 ntBASIC6.49□□□□□ -1.37
HERC6Q8IVU3 AL023583.1-201ENST00000607518 1143 ntBASIC6.49□□□□□ -1.37
HERC6Q8IVU3 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC6.49□□□□□ -1.37
HERC6Q8IVU3 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC6.49□□□□□ -1.37
HERC6Q8IVU3 AC037198.3-201ENST00000616754 526 ntBASIC6.49□□□□□ -1.37
HERC6Q8IVU3 AL137067.2-201ENST00000621202 131 ntBASIC6.49□□□□□ -1.37
HERC6Q8IVU3 CU639417.4-201ENST00000623928 207 ntBASIC6.49□□□□□ -1.37
HERC6Q8IVU3 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC6.49□□□□□ -1.37
HERC6Q8IVU3 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
HERC6Q8IVU3 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC6.49□□□□□ -1.37
HERC6Q8IVU3 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
HERC6Q8IVU3 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.49□□□□□ -1.37
HERC6Q8IVU3 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
HERC6Q8IVU3 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
HERC6Q8IVU3 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
HERC6Q8IVU3 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC6.49□□□□□ -1.37
HERC6Q8IVU3 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
HERC6Q8IVU3 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
HERC6Q8IVU3 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
HERC6Q8IVU3 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
HERC6Q8IVU3 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms