Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 MRRFP1-201ENST00000435941 1675 ntBASIC5.11□□□□□ -1.59
LRRC28Q86X40 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
LRRC28Q86X40 AC097063.1-201ENST00000426714 1797 ntBASIC5.11□□□□□ -1.59
LRRC28Q86X40 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
LRRC28Q86X40 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
LRRC28Q86X40 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LRRC28Q86X40 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
LRRC28Q86X40 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
LRRC28Q86X40 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.1□□□□□ -1.59
LRRC28Q86X40 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.1□□□□□ -1.59
LRRC28Q86X40 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
LRRC28Q86X40 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.1□□□□□ -1.59
LRRC28Q86X40 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
LRRC28Q86X40 RN7SKP78-201ENST00000364711 318 ntBASIC5.1□□□□□ -1.59
LRRC28Q86X40 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
LRRC28Q86X40 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.1□□□□□ -1.59
LRRC28Q86X40 AL133482.1-201ENST00000415988 498 ntBASIC5.1□□□□□ -1.59
LRRC28Q86X40 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.1□□□□□ -1.59
LRRC28Q86X40 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
LRRC28Q86X40 ING3-204ENST00000431467 1447 ntTSL 2 BASIC5.1□□□□□ -1.59
LRRC28Q86X40 AL359265.1-201ENST00000440296 795 ntBASIC5.1□□□□□ -1.59
LRRC28Q86X40 EIF5AP4-201ENST00000441206 465 ntBASIC5.1□□□□□ -1.59
LRRC28Q86X40 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
LRRC28Q86X40 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.1□□□□□ -1.59
LRRC28Q86X40 ZNF619P1-201ENST00000446539 752 ntBASIC5.1□□□□□ -1.59
LRRC28Q86X40 NPM1P19-201ENST00000450070 712 ntBASIC5.1□□□□□ -1.59
LRRC28Q86X40 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
LRRC28Q86X40 AC104164.1-201ENST00000460282 590 ntBASIC5.1□□□□□ -1.59
LRRC28Q86X40 RN7SL72P-201ENST00000460697 269 ntBASIC5.1□□□□□ -1.59
LRRC28Q86X40 NDUFA5P5-201ENST00000468361 342 ntBASIC5.1□□□□□ -1.59
LRRC28Q86X40 AC020633.1-201ENST00000468439 2247 ntBASIC5.1□□□□□ -1.59
LRRC28Q86X40 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.1□□□□□ -1.59
LRRC28Q86X40 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC5.1□□□□□ -1.59
LRRC28Q86X40 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.1□□□□□ -1.59
LRRC28Q86X40 RN7SKP238-201ENST00000516483 249 ntBASIC5.1□□□□□ -1.59
LRRC28Q86X40 AC008627.1-201ENST00000517511 1704 ntBASIC5.1□□□□□ -1.59
LRRC28Q86X40 OR4A17P-201ENST00000526032 904 ntBASIC5.1□□□□□ -1.59
LRRC28Q86X40 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC5.1□□□□□ -1.59
LRRC28Q86X40 AC027026.1-201ENST00000532323 742 ntBASIC5.1□□□□□ -1.59
LRRC28Q86X40 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
LRRC28Q86X40 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.1□□□□□ -1.59
LRRC28Q86X40 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
LRRC28Q86X40 LINC00556-201ENST00000569603 412 ntBASIC5.1□□□□□ -1.59
LRRC28Q86X40 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC5.1□□□□□ -1.59
LRRC28Q86X40 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.1□□□□□ -1.59
LRRC28Q86X40 AC006363.1-201ENST00000603806 463 ntBASIC5.1□□□□□ -1.59
LRRC28Q86X40 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.1□□□□□ -1.59
LRRC28Q86X40 MIR6861-201ENST00000618657 64 ntBASIC5.1□□□□□ -1.59
LRRC28Q86X40 AC129778.1-202ENST00000623812 261 ntBASIC5.1□□□□□ -1.59
LRRC28Q86X40 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.1□□□□□ -1.59
LRRC28Q86X40 AL591379.1-207ENST00000635982 261 ntBASIC5.1□□□□□ -1.59
LRRC28Q86X40 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.1□□□□□ -1.59
LRRC28Q86X40 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC5.1□□□□□ -1.59
LRRC28Q86X40 ABCC13-202ENST00000463099 3842 ntBASIC5.1□□□□□ -1.59
LRRC28Q86X40 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
LRRC28Q86X40 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
LRRC28Q86X40 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
LRRC28Q86X40 HSPA8P14-201ENST00000552265 1805 ntBASIC5.09□□□□□ -1.59
LRRC28Q86X40 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
LRRC28Q86X40 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
LRRC28Q86X40 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.09□□□□□ -1.59
LRRC28Q86X40 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.09□□□□□ -1.59
LRRC28Q86X40 FBXL21-201ENST00000297158 1305 ntBASIC5.09□□□□□ -1.59
LRRC28Q86X40 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
LRRC28Q86X40 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
LRRC28Q86X40 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
LRRC28Q86X40 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.09□□□□□ -1.59
LRRC28Q86X40 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.09□□□□□ -1.59
LRRC28Q86X40 AC099677.3-201ENST00000427081 395 ntBASIC5.09□□□□□ -1.59
LRRC28Q86X40 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC5.09□□□□□ -1.59
LRRC28Q86X40 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.09□□□□□ -1.59
LRRC28Q86X40 DNAJA1P5-201ENST00000440278 943 ntBASIC5.09□□□□□ -1.59
LRRC28Q86X40 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.09□□□□□ -1.59
LRRC28Q86X40 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC5.09□□□□□ -1.59
LRRC28Q86X40 AL161722.1-201ENST00000446972 1032 ntBASIC5.09□□□□□ -1.59
LRRC28Q86X40 AC005077.1-201ENST00000449226 375 ntBASIC5.09□□□□□ -1.59
LRRC28Q86X40 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.09□□□□□ -1.59
LRRC28Q86X40 RNU1-88P-201ENST00000459274 128 ntBASIC5.09□□□□□ -1.59
LRRC28Q86X40 SNORD125-201ENST00000459538 96 ntBASIC5.09□□□□□ -1.59
LRRC28Q86X40 EIF3LP3-201ENST00000495197 822 ntBASIC5.09□□□□□ -1.59
LRRC28Q86X40 AC025458.1-201ENST00000506046 166 ntBASIC5.09□□□□□ -1.59
LRRC28Q86X40 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC5.09□□□□□ -1.59
LRRC28Q86X40 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.09□□□□□ -1.59
LRRC28Q86X40 MIR2117-201ENST00000516780 80 ntBASIC5.09□□□□□ -1.59
LRRC28Q86X40 TRIM77BP-201ENST00000524985 1119 ntBASIC5.09□□□□□ -1.59
LRRC28Q86X40 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC5.09□□□□□ -1.59
LRRC28Q86X40 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC5.09□□□□□ -1.59
LRRC28Q86X40 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.09□□□□□ -1.59
LRRC28Q86X40 AP005119.1-201ENST00000580956 292 ntBASIC5.09□□□□□ -1.59
LRRC28Q86X40 AC005244.1-201ENST00000582566 339 ntBASIC5.09□□□□□ -1.59
LRRC28Q86X40 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC5.09□□□□□ -1.59
LRRC28Q86X40 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC5.09□□□□□ -1.59
LRRC28Q86X40 AC067773.1-201ENST00000603284 1094 ntBASIC5.09□□□□□ -1.59
LRRC28Q86X40 AC108865.2-201ENST00000606881 432 ntBASIC5.09□□□□□ -1.59
LRRC28Q86X40 AL365181.4-201ENST00000609800 547 ntBASIC5.09□□□□□ -1.59
LRRC28Q86X40 AC008833.1-201ENST00000611633 691 ntBASIC5.09□□□□□ -1.59
LRRC28Q86X40 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.09□□□□□ -1.59
LRRC28Q86X40 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.09□□□□□ -1.59
LRRC28Q86X40 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.09□□□□□ -1.59
LRRC28Q86X40 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms