Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC3.89□□□□□ -1.79
SCXQ7RTU7 AC093591.2-201ENST00000565254 3843 ntBASIC3.89□□□□□ -1.79
SCXQ7RTU7 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC3.89□□□□□ -1.79
SCXQ7RTU7 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC3.89□□□□□ -1.79
SCXQ7RTU7 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC3.89□□□□□ -1.79
SCXQ7RTU7 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC3.89□□□□□ -1.79
SCXQ7RTU7 AP001357.1-201ENST00000586304 1053 ntBASIC3.89□□□□□ -1.79
SCXQ7RTU7 AP002884.5-201ENST00000595053 1132 ntBASIC3.89□□□□□ -1.79
SCXQ7RTU7 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC3.89□□□□□ -1.79
SCXQ7RTU7 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC3.89□□□□□ -1.79
SCXQ7RTU7 AC011445.2-201ENST00000599274 173 ntBASIC3.89□□□□□ -1.79
SCXQ7RTU7 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC3.89□□□□□ -1.79
SCXQ7RTU7 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
SCXQ7RTU7 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC3.89□□□□□ -1.79
SCXQ7RTU7 Z83820.1-201ENST00000456978 1499 ntBASIC3.89□□□□□ -1.79
SCXQ7RTU7 CR382285.2-201ENST00000624662 1495 ntBASIC3.89□□□□□ -1.79
SCXQ7RTU7 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
SCXQ7RTU7 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
SCXQ7RTU7 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SCXQ7RTU7 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SCXQ7RTU7 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SCXQ7RTU7 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC3.89□□□□□ -1.79
SCXQ7RTU7 PSG10P-201ENST00000501199 1500 ntBASIC3.89□□□□□ -1.79
SCXQ7RTU7 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC3.89□□□□□ -1.79
SCXQ7RTU7 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SCXQ7RTU7 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SCXQ7RTU7 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SCXQ7RTU7 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC3.89□□□□□ -1.79
SCXQ7RTU7 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SCXQ7RTU7 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC3.89□□□□□ -1.79
SCXQ7RTU7 AC093671.1-201ENST00000624981 2929 ntBASIC3.88□□□□□ -1.79
SCXQ7RTU7 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SCXQ7RTU7 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
SCXQ7RTU7 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SCXQ7RTU7 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC3.88□□□□□ -1.79
SCXQ7RTU7 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SCXQ7RTU7 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SCXQ7RTU7 AL355834.1-201ENST00000556602 3965 ntBASIC3.88□□□□□ -1.79
SCXQ7RTU7 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SCXQ7RTU7 AL513548.1-201ENST00000562904 1724 ntBASIC3.88□□□□□ -1.79
SCXQ7RTU7 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
SCXQ7RTU7 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SCXQ7RTU7 OR52B3P-201ENST00000314715 928 ntBASIC3.88□□□□□ -1.79
SCXQ7RTU7 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
SCXQ7RTU7 TMSB4XP4-201ENST00000323496 618 ntBASIC3.88□□□□□ -1.79
SCXQ7RTU7 TMSB4XP2-201ENST00000335179 210 ntBASIC3.88□□□□□ -1.79
SCXQ7RTU7 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
SCXQ7RTU7 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
SCXQ7RTU7 AL121835.1-201ENST00000404250 354 ntBASIC3.88□□□□□ -1.79
SCXQ7RTU7 AL589994.1-201ENST00000404962 340 ntBASIC3.88□□□□□ -1.79
SCXQ7RTU7 RNA5SP178-201ENST00000410380 128 ntBASIC3.88□□□□□ -1.79
SCXQ7RTU7 RN7SKP206-201ENST00000410823 293 ntBASIC3.88□□□□□ -1.79
SCXQ7RTU7 RNU6-233P-201ENST00000410845 141 ntBASIC3.88□□□□□ -1.79
SCXQ7RTU7 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC3.88□□□□□ -1.79
SCXQ7RTU7 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC3.88□□□□□ -1.79
SCXQ7RTU7 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC3.88□□□□□ -1.79
SCXQ7RTU7 AC079922.1-201ENST00000443291 359 ntBASIC3.88□□□□□ -1.79
SCXQ7RTU7 TRIM60P16-201ENST00000444048 694 ntBASIC3.88□□□□□ -1.79
SCXQ7RTU7 GAPDHP23-201ENST00000444823 993 ntBASIC3.88□□□□□ -1.79
SCXQ7RTU7 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC3.88□□□□□ -1.79
SCXQ7RTU7 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC3.88□□□□□ -1.79
SCXQ7RTU7 AC092865.4-201ENST00000477936 615 ntBASIC3.88□□□□□ -1.79
SCXQ7RTU7 PPIAP19-201ENST00000486414 492 ntBASIC3.88□□□□□ -1.79
SCXQ7RTU7 RN7SL101P-201ENST00000496350 279 ntBASIC3.88□□□□□ -1.79
SCXQ7RTU7 RN7SL284P-201ENST00000498823 275 ntBASIC3.88□□□□□ -1.79
SCXQ7RTU7 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
SCXQ7RTU7 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC3.88□□□□□ -1.79
SCXQ7RTU7 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC3.88□□□□□ -1.79
SCXQ7RTU7 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC3.88□□□□□ -1.79
SCXQ7RTU7 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC3.88□□□□□ -1.79
SCXQ7RTU7 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC3.88□□□□□ -1.79
SCXQ7RTU7 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC3.88□□□□□ -1.79
SCXQ7RTU7 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
SCXQ7RTU7 AC079600.1-201ENST00000550326 297 ntBASIC3.88□□□□□ -1.79
SCXQ7RTU7 AL358913.1-201ENST00000554342 121 ntBASIC3.88□□□□□ -1.79
SCXQ7RTU7 AL121579.2-201ENST00000555466 590 ntBASIC3.88□□□□□ -1.79
SCXQ7RTU7 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC3.88□□□□□ -1.79
SCXQ7RTU7 STARD6-202ENST00000577499 696 ntTSL 2 BASIC3.88□□□□□ -1.79
SCXQ7RTU7 AP005119.1-201ENST00000580956 292 ntBASIC3.88□□□□□ -1.79
SCXQ7RTU7 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC3.88□□□□□ -1.79
SCXQ7RTU7 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC3.88□□□□□ -1.79
SCXQ7RTU7 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
SCXQ7RTU7 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC3.88□□□□□ -1.79
SCXQ7RTU7 AC008555.7-201ENST00000605008 583 ntBASIC3.88□□□□□ -1.79
SCXQ7RTU7 AL645933.2-201ENST00000606743 1207 ntBASIC3.88□□□□□ -1.79
SCXQ7RTU7 AL356608.1-201ENST00000610034 820 ntBASIC3.88□□□□□ -1.79
SCXQ7RTU7 MIR6793-201ENST00000612376 63 ntBASIC3.88□□□□□ -1.79
SCXQ7RTU7 AC127024.6-201ENST00000621598 424 ntBASIC3.88□□□□□ -1.79
SCXQ7RTU7 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC3.88□□□□□ -1.79
SCXQ7RTU7 AL136228.1-201ENST00000622221 319 ntBASIC3.88□□□□□ -1.79
SCXQ7RTU7 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC3.88□□□□□ -1.79
SCXQ7RTU7 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC3.88□□□□□ -1.79
SCXQ7RTU7 5S_rRNA.28-201ENST00000638107 119 ntBASIC3.88□□□□□ -1.79
SCXQ7RTU7 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC3.88□□□□□ -1.79
SCXQ7RTU7 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SCXQ7RTU7 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SCXQ7RTU7 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC3.88□□□□□ -1.79
SCXQ7RTU7 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SCXQ7RTU7 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SCXQ7RTU7 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms