Protein–RNA interactions for Protein: Q3LFD5

USP41, Putative ubiquitin carboxyl-terminal hydrolase 41, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP41Q3LFD5 OR11H2-202ENST00000641517 1085 ntBASIC6.25□□□□□ -1.41
USP41Q3LFD5 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
USP41Q3LFD5 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
USP41Q3LFD5 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
USP41Q3LFD5 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
USP41Q3LFD5 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC6.25□□□□□ -1.41
USP41Q3LFD5 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
USP41Q3LFD5 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
USP41Q3LFD5 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
USP41Q3LFD5 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
USP41Q3LFD5 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
USP41Q3LFD5 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.25□□□□□ -1.41
USP41Q3LFD5 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC6.25□□□□□ -1.41
USP41Q3LFD5 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
USP41Q3LFD5 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
USP41Q3LFD5 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
USP41Q3LFD5 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
USP41Q3LFD5 NLRP3P1-201ENST00000622303 1785 ntBASIC6.24□□□□□ -1.41
USP41Q3LFD5 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
USP41Q3LFD5 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
USP41Q3LFD5 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.24□□□□□ -1.41
USP41Q3LFD5 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
USP41Q3LFD5 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
USP41Q3LFD5 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
USP41Q3LFD5 AC083799.1-201ENST00000366451 910 ntBASIC6.24□□□□□ -1.41
USP41Q3LFD5 BX510359.3-201ENST00000422168 306 ntBASIC6.24□□□□□ -1.41
USP41Q3LFD5 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6.24□□□□□ -1.41
USP41Q3LFD5 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC6.24□□□□□ -1.41
USP41Q3LFD5 AL663074.2-201ENST00000440621 479 ntBASIC6.24□□□□□ -1.41
USP41Q3LFD5 AC023141.8-201ENST00000442554 208 ntBASIC6.24□□□□□ -1.41
USP41Q3LFD5 EEF1B2P6-201ENST00000445713 673 ntBASIC6.24□□□□□ -1.41
USP41Q3LFD5 NDUFA5P8-201ENST00000449019 346 ntBASIC6.24□□□□□ -1.41
USP41Q3LFD5 MTCYBP14-201ENST00000457471 715 ntBASIC6.24□□□□□ -1.41
USP41Q3LFD5 snoU13.29-201ENST00000459370 104 ntBASIC6.24□□□□□ -1.41
USP41Q3LFD5 AC110749.1-201ENST00000462007 357 ntBASIC6.24□□□□□ -1.41
USP41Q3LFD5 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC6.24□□□□□ -1.41
USP41Q3LFD5 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC6.24□□□□□ -1.41
USP41Q3LFD5 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC6.24□□□□□ -1.41
USP41Q3LFD5 IGLV3-30-201ENST00000524362 298 ntBASIC6.24□□□□□ -1.41
USP41Q3LFD5 HMGB1P42-201ENST00000532126 553 ntBASIC6.24□□□□□ -1.41
USP41Q3LFD5 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC6.24□□□□□ -1.41
USP41Q3LFD5 AL049874.4-201ENST00000557593 255 ntBASIC6.24□□□□□ -1.41
USP41Q3LFD5 AC067805.1-201ENST00000559344 470 ntBASIC6.24□□□□□ -1.41
USP41Q3LFD5 AC093524.1-201ENST00000564266 1094 ntBASIC6.24□□□□□ -1.41
USP41Q3LFD5 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC6.24□□□□□ -1.41
USP41Q3LFD5 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC6.24□□□□□ -1.41
USP41Q3LFD5 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC6.24□□□□□ -1.41
USP41Q3LFD5 AP000864.1-201ENST00000609424 650 ntBASIC6.24□□□□□ -1.41
USP41Q3LFD5 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC6.24□□□□□ -1.41
USP41Q3LFD5 AC022919.1-201ENST00000624979 626 ntBASIC6.24□□□□□ -1.41
USP41Q3LFD5 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
USP41Q3LFD5 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
USP41Q3LFD5 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.24□□□□□ -1.41
USP41Q3LFD5 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
USP41Q3LFD5 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
USP41Q3LFD5 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
USP41Q3LFD5 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC6.24□□□□□ -1.41
USP41Q3LFD5 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
USP41Q3LFD5 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.24□□□□□ -1.41
USP41Q3LFD5 AC083837.1-201ENST00000565297 2994 ntBASIC6.24□□□□□ -1.41
USP41Q3LFD5 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
USP41Q3LFD5 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
USP41Q3LFD5 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
USP41Q3LFD5 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC6.23□□□□□ -1.41
USP41Q3LFD5 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
USP41Q3LFD5 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.23□□□□□ -1.41
USP41Q3LFD5 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
USP41Q3LFD5 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC6.23□□□□□ -1.41
USP41Q3LFD5 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
USP41Q3LFD5 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC6.23□□□□□ -1.41
USP41Q3LFD5 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
USP41Q3LFD5 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
USP41Q3LFD5 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.23□□□□□ -1.41
USP41Q3LFD5 GNG5P2-201ENST00000372054 207 ntBASIC6.23□□□□□ -1.41
USP41Q3LFD5 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
USP41Q3LFD5 FAM204CP-201ENST00000424489 642 ntBASIC6.23□□□□□ -1.41
USP41Q3LFD5 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.23□□□□□ -1.41
USP41Q3LFD5 RPS12P17-201ENST00000438591 377 ntBASIC6.23□□□□□ -1.41
USP41Q3LFD5 XKRYP6-201ENST00000440468 1116 ntBASIC6.23□□□□□ -1.41
USP41Q3LFD5 XKRYP3-201ENST00000442113 1116 ntBASIC6.23□□□□□ -1.41
USP41Q3LFD5 CUBNP2-201ENST00000443534 1139 ntBASIC6.23□□□□□ -1.41
USP41Q3LFD5 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC6.23□□□□□ -1.41
USP41Q3LFD5 PFN1P6-201ENST00000476786 399 ntBASIC6.23□□□□□ -1.41
USP41Q3LFD5 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC6.23□□□□□ -1.41
USP41Q3LFD5 AC112184.1-201ENST00000505179 312 ntBASIC6.23□□□□□ -1.41
USP41Q3LFD5 SCARNA6.1-201ENST00000516989 238 ntBASIC6.23□□□□□ -1.41
USP41Q3LFD5 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC6.23□□□□□ -1.41
USP41Q3LFD5 AC087272.1-201ENST00000523624 533 ntBASIC6.23□□□□□ -1.41
USP41Q3LFD5 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC6.23□□□□□ -1.41
USP41Q3LFD5 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC6.23□□□□□ -1.41
USP41Q3LFD5 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC6.23□□□□□ -1.41
USP41Q3LFD5 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC6.23□□□□□ -1.41
USP41Q3LFD5 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
USP41Q3LFD5 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
USP41Q3LFD5 CU639417.4-201ENST00000623928 207 ntBASIC6.23□□□□□ -1.41
USP41Q3LFD5 AL118508.4-201ENST00000624142 1176 ntBASIC6.23□□□□□ -1.41
USP41Q3LFD5 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC6.23□□□□□ -1.41
USP41Q3LFD5 DCN-218ENST00000551354 2924 ntTSL 3 BASIC6.23□□□□□ -1.41
USP41Q3LFD5 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
USP41Q3LFD5 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms