Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RFX4Q33E94 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC5.28□□□□□ -1.56
RFX4Q33E94 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.28□□□□□ -1.56
RFX4Q33E94 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC5.28□□□□□ -1.56
RFX4Q33E94 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RFX4Q33E94 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.28□□□□□ -1.56
RFX4Q33E94 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.28□□□□□ -1.56
RFX4Q33E94 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.28□□□□□ -1.56
RFX4Q33E94 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RFX4Q33E94 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RFX4Q33E94 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.28□□□□□ -1.56
RFX4Q33E94 AC006206.1-201ENST00000544842 3387 ntBASIC5.28□□□□□ -1.56
RFX4Q33E94 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
RFX4Q33E94 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
RFX4Q33E94 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.28□□□□□ -1.56
RFX4Q33E94 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
RFX4Q33E94 AC133552.1-201ENST00000569988 4007 ntBASIC5.27□□□□□ -1.57
RFX4Q33E94 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.27□□□□□ -1.57
RFX4Q33E94 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RFX4Q33E94 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RFX4Q33E94 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
RFX4Q33E94 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
RFX4Q33E94 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RFX4Q33E94 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RFX4Q33E94 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
RFX4Q33E94 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RFX4Q33E94 OR9K1P-201ENST00000326513 941 ntBASIC5.27□□□□□ -1.57
RFX4Q33E94 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
RFX4Q33E94 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
RFX4Q33E94 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.27□□□□□ -1.57
RFX4Q33E94 SNORA48.4-201ENST00000391089 134 ntBASIC5.27□□□□□ -1.57
RFX4Q33E94 AC005042.1-201ENST00000393397 800 ntBASIC5.27□□□□□ -1.57
RFX4Q33E94 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
RFX4Q33E94 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC5.27□□□□□ -1.57
RFX4Q33E94 KIF4CP-201ENST00000422742 1279 ntBASIC5.27□□□□□ -1.57
RFX4Q33E94 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.27□□□□□ -1.57
RFX4Q33E94 AC073465.2-201ENST00000440938 498 ntBASIC5.27□□□□□ -1.57
RFX4Q33E94 BMS1P10-201ENST00000443754 1120 ntBASIC5.27□□□□□ -1.57
RFX4Q33E94 AC007383.1-201ENST00000445875 636 ntBASIC5.27□□□□□ -1.57
RFX4Q33E94 TAAR4P-201ENST00000454843 1039 ntBASIC5.27□□□□□ -1.57
RFX4Q33E94 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.27□□□□□ -1.57
RFX4Q33E94 NXT1P1-201ENST00000458481 316 ntBASIC5.27□□□□□ -1.57
RFX4Q33E94 RN7SL269P-201ENST00000467795 305 ntBASIC5.27□□□□□ -1.57
RFX4Q33E94 AP000797.2-201ENST00000475768 606 ntBASIC5.27□□□□□ -1.57
RFX4Q33E94 RN7SL612P-201ENST00000497704 295 ntBASIC5.27□□□□□ -1.57
RFX4Q33E94 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC5.27□□□□□ -1.57
RFX4Q33E94 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.27□□□□□ -1.57
RFX4Q33E94 AC116917.1-201ENST00000520558 305 ntBASIC5.27□□□□□ -1.57
RFX4Q33E94 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC5.27□□□□□ -1.57
RFX4Q33E94 AC079064.1-201ENST00000528365 362 ntBASIC5.27□□□□□ -1.57
RFX4Q33E94 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.27□□□□□ -1.57
RFX4Q33E94 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.27□□□□□ -1.57
RFX4Q33E94 BTG1P1-201ENST00000540396 508 ntBASIC5.27□□□□□ -1.57
RFX4Q33E94 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.27□□□□□ -1.57
RFX4Q33E94 AC007346.1-201ENST00000569208 867 ntBASIC5.27□□□□□ -1.57
RFX4Q33E94 AC004232.2-201ENST00000574245 821 ntBASIC5.27□□□□□ -1.57
RFX4Q33E94 RN7SL230P-201ENST00000580835 303 ntBASIC5.27□□□□□ -1.57
RFX4Q33E94 AC073333.2-201ENST00000603589 769 ntBASIC5.27□□□□□ -1.57
RFX4Q33E94 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.27□□□□□ -1.57
RFX4Q33E94 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.27□□□□□ -1.57
RFX4Q33E94 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.27□□□□□ -1.57
RFX4Q33E94 AL021918.2-201ENST00000613415 194 ntBASIC5.27□□□□□ -1.57
RFX4Q33E94 HTR1DP1-201ENST00000616500 888 ntBASIC5.27□□□□□ -1.57
RFX4Q33E94 FAM27E2-201ENST00000619668 403 ntBASIC5.27□□□□□ -1.57
RFX4Q33E94 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
RFX4Q33E94 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.27□□□□□ -1.57
RFX4Q33E94 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RFX4Q33E94 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.27□□□□□ -1.57
RFX4Q33E94 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
RFX4Q33E94 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
RFX4Q33E94 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
RFX4Q33E94 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
RFX4Q33E94 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
RFX4Q33E94 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RFX4Q33E94 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RFX4Q33E94 HSPA8P14-201ENST00000552265 1805 ntBASIC5.26□□□□□ -1.57
RFX4Q33E94 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.26□□□□□ -1.57
RFX4Q33E94 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC5.26□□□□□ -1.57
RFX4Q33E94 AL360270.2-201ENST00000562952 5985 ntBASIC5.26□□□□□ -1.57
RFX4Q33E94 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC5.26□□□□□ -1.57
RFX4Q33E94 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
RFX4Q33E94 AL355581.1-201ENST00000415964 830 ntTSL 2 BASIC5.26□□□□□ -1.57
RFX4Q33E94 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.26□□□□□ -1.57
RFX4Q33E94 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.26□□□□□ -1.57
RFX4Q33E94 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC5.26□□□□□ -1.57
RFX4Q33E94 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.26□□□□□ -1.57
RFX4Q33E94 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.26□□□□□ -1.57
RFX4Q33E94 DEFA9P-201ENST00000433042 285 ntBASIC5.26□□□□□ -1.57
RFX4Q33E94 AL353662.1-201ENST00000439099 327 ntBASIC5.26□□□□□ -1.57
RFX4Q33E94 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.26□□□□□ -1.57
RFX4Q33E94 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC5.26□□□□□ -1.57
RFX4Q33E94 OR52E3P-201ENST00000452083 936 ntBASIC5.26□□□□□ -1.57
RFX4Q33E94 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.26□□□□□ -1.57
RFX4Q33E94 RN7SL362P-201ENST00000494228 267 ntBASIC5.26□□□□□ -1.57
RFX4Q33E94 USP9YP2-201ENST00000504503 1000 ntBASIC5.26□□□□□ -1.57
RFX4Q33E94 AC113367.2-201ENST00000505749 160 ntBASIC5.26□□□□□ -1.57
RFX4Q33E94 AC074255.1-201ENST00000511259 501 ntBASIC5.26□□□□□ -1.57
RFX4Q33E94 USP9YP1-201ENST00000513521 1002 ntBASIC5.26□□□□□ -1.57
RFX4Q33E94 RNA5SP441-201ENST00000516809 88 ntBASIC5.26□□□□□ -1.57
RFX4Q33E94 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms