Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
CDKL1Q00532 GLUD1P3-202ENST00000508551 200 ntBASIC5.61□□□□□ -1.51
CDKL1Q00532 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.61□□□□□ -1.51
CDKL1Q00532 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC5.61□□□□□ -1.51
CDKL1Q00532 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.61□□□□□ -1.51
CDKL1Q00532 UGT2B24P-201ENST00000514441 1597 ntBASIC5.61□□□□□ -1.51
CDKL1Q00532 Y_RNA.667-201ENST00000516212 107 ntBASIC5.61□□□□□ -1.51
CDKL1Q00532 Vault.2-201ENST00000516519 98 ntBASIC5.61□□□□□ -1.51
CDKL1Q00532 RNA5SP438-201ENST00000516561 112 ntBASIC5.61□□□□□ -1.51
CDKL1Q00532 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.61□□□□□ -1.51
CDKL1Q00532 AC027369.2-201ENST00000528030 440 ntBASIC5.61□□□□□ -1.51
CDKL1Q00532 AP004609.2-201ENST00000532177 190 ntBASIC5.61□□□□□ -1.51
CDKL1Q00532 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.61□□□□□ -1.51
CDKL1Q00532 AC084824.2-201ENST00000548906 345 ntBASIC5.61□□□□□ -1.51
CDKL1Q00532 AC107958.1-201ENST00000556576 290 ntBASIC5.61□□□□□ -1.51
CDKL1Q00532 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CDKL1Q00532 AC096996.1-201ENST00000563813 325 ntBASIC5.61□□□□□ -1.51
CDKL1Q00532 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.61□□□□□ -1.51
CDKL1Q00532 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.61□□□□□ -1.51
CDKL1Q00532 AP005901.4-201ENST00000577336 569 ntBASIC5.61□□□□□ -1.51
CDKL1Q00532 COX6CP7-201ENST00000597056 208 ntBASIC5.61□□□□□ -1.51
CDKL1Q00532 AL035661.1-201ENST00000620459 1144 ntBASIC5.61□□□□□ -1.51
CDKL1Q00532 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.61□□□□□ -1.51
CDKL1Q00532 CASC19-255ENST00000641733 1385 ntBASIC5.61□□□□□ -1.51
CDKL1Q00532 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
CDKL1Q00532 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CDKL1Q00532 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
CDKL1Q00532 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CDKL1Q00532 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.61□□□□□ -1.51
CDKL1Q00532 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.6□□□□□ -1.51
CDKL1Q00532 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.6□□□□□ -1.51
CDKL1Q00532 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
CDKL1Q00532 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
CDKL1Q00532 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
CDKL1Q00532 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CDKL1Q00532 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CDKL1Q00532 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
CDKL1Q00532 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
CDKL1Q00532 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.6□□□□□ -1.51
CDKL1Q00532 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
CDKL1Q00532 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
CDKL1Q00532 SUGT1P2-201ENST00000379452 992 ntBASIC5.6□□□□□ -1.51
CDKL1Q00532 MIR130A-201ENST00000385274 89 ntBASIC5.6□□□□□ -1.51
CDKL1Q00532 AC004386.1-201ENST00000393214 761 ntBASIC5.6□□□□□ -1.51
CDKL1Q00532 MIR1203-201ENST00000408812 85 ntBASIC5.6□□□□□ -1.51
CDKL1Q00532 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC5.6□□□□□ -1.51
CDKL1Q00532 AL357752.1-201ENST00000412817 349 ntBASIC5.6□□□□□ -1.51
CDKL1Q00532 MRPL53P1-201ENST00000414323 319 ntBASIC5.6□□□□□ -1.51
CDKL1Q00532 NIFKP3-201ENST00000417799 865 ntBASIC5.6□□□□□ -1.51
CDKL1Q00532 AL035660.1-201ENST00000422041 222 ntBASIC5.6□□□□□ -1.51
CDKL1Q00532 OR10T1P-201ENST00000424327 947 ntBASIC5.6□□□□□ -1.51
CDKL1Q00532 AC126120.1-201ENST00000431082 470 ntBASIC5.6□□□□□ -1.51
CDKL1Q00532 GAPDHP48-201ENST00000436626 961 ntBASIC5.6□□□□□ -1.51
CDKL1Q00532 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.6□□□□□ -1.51
CDKL1Q00532 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.6□□□□□ -1.51
CDKL1Q00532 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.6□□□□□ -1.51
CDKL1Q00532 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC5.6□□□□□ -1.51
CDKL1Q00532 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.6□□□□□ -1.51
CDKL1Q00532 SNORD125-201ENST00000459538 96 ntBASIC5.6□□□□□ -1.51
CDKL1Q00532 RN7SL197P-201ENST00000466981 299 ntBASIC5.6□□□□□ -1.51
CDKL1Q00532 AP002884.1-201ENST00000479691 655 ntBASIC5.6□□□□□ -1.51
CDKL1Q00532 RPS7P6-201ENST00000485777 579 ntBASIC5.6□□□□□ -1.51
CDKL1Q00532 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC5.6□□□□□ -1.51
CDKL1Q00532 APOBEC3AP1-201ENST00000511396 287 ntBASIC5.6□□□□□ -1.51
CDKL1Q00532 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.6□□□□□ -1.51
CDKL1Q00532 AC021146.10-201ENST00000515628 706 ntBASIC5.6□□□□□ -1.51
CDKL1Q00532 RNA5SP473-201ENST00000516402 125 ntBASIC5.6□□□□□ -1.51
CDKL1Q00532 AC139365.2-201ENST00000517972 253 ntBASIC5.6□□□□□ -1.51
CDKL1Q00532 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC5.6□□□□□ -1.51
CDKL1Q00532 CETN3-206ENST00000522864 738 ntTSL 3 BASIC5.6□□□□□ -1.51
CDKL1Q00532 AC024405.1-201ENST00000532521 1042 ntBASIC5.6□□□□□ -1.51
CDKL1Q00532 DPPA3P2-202ENST00000557188 1219 ntBASIC5.6□□□□□ -1.51
CDKL1Q00532 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.6□□□□□ -1.51
CDKL1Q00532 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.6□□□□□ -1.51
CDKL1Q00532 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CDKL1Q00532 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.6□□□□□ -1.51
CDKL1Q00532 AC018809.2-201ENST00000602436 3823 ntBASIC5.6□□□□□ -1.51
CDKL1Q00532 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.6□□□□□ -1.51
CDKL1Q00532 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.6□□□□□ -1.51
CDKL1Q00532 AC022919.1-201ENST00000624979 626 ntBASIC5.6□□□□□ -1.51
CDKL1Q00532 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.6□□□□□ -1.51
CDKL1Q00532 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.6□□□□□ -1.51
CDKL1Q00532 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.6□□□□□ -1.51
CDKL1Q00532 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
CDKL1Q00532 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.6□□□□□ -1.51
CDKL1Q00532 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.6□□□□□ -1.51
CDKL1Q00532 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CDKL1Q00532 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CDKL1Q00532 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
CDKL1Q00532 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CDKL1Q00532 TET1P1-201ENST00000426627 2301 ntBASIC5.59□□□□□ -1.51
CDKL1Q00532 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CDKL1Q00532 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CDKL1Q00532 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.59□□□□□ -1.51
CDKL1Q00532 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CDKL1Q00532 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
CDKL1Q00532 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC5.59□□□□□ -1.51
CDKL1Q00532 RN7SKP275-201ENST00000364626 301 ntBASIC5.59□□□□□ -1.51
CDKL1Q00532 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
CDKL1Q00532 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms