Protein–RNA interactions for Protein: P61165

TMEM258, Transmembrane protein 258, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258P61165 CCL4L2-218ENST00000620576 652 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
TMEM258P61165 Metazoa_SRP.177-201ENST00000621099 283 ntBASIC3.16□□□□□ -1.9
TMEM258P61165 AC005086.2-201ENST00000624939 228 ntBASIC3.16□□□□□ -1.9
TMEM258P61165 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC3.16□□□□□ -1.9
TMEM258P61165 OR52B5P-202ENST00000641118 1110 ntBASIC3.16□□□□□ -1.9
TMEM258P61165 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
TMEM258P61165 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC3.16□□□□□ -1.9
TMEM258P61165 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
TMEM258P61165 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
TMEM258P61165 PKD2L2-201ENST00000290431 2202 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
TMEM258P61165 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
TMEM258P61165 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC3.16□□□□□ -1.9
TMEM258P61165 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
TMEM258P61165 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC3.15□□□□□ -1.9
TMEM258P61165 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
TMEM258P61165 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.15□□□□□ -1.9
TMEM258P61165 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.9
TMEM258P61165 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC3.15□□□□□ -1.9
TMEM258P61165 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
TMEM258P61165 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.9
TMEM258P61165 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
TMEM258P61165 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC3.15□□□□□ -1.91
TMEM258P61165 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
TMEM258P61165 Metazoa_SRP.2-201ENST00000359385 269 ntBASIC3.15□□□□□ -1.91
TMEM258P61165 RNA5SP79-201ENST00000365193 109 ntBASIC3.15□□□□□ -1.91
TMEM258P61165 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
TMEM258P61165 RN7SKP216-201ENST00000411050 312 ntBASIC3.15□□□□□ -1.91
TMEM258P61165 FXNP2-201ENST00000411625 547 ntBASIC3.15□□□□□ -1.91
TMEM258P61165 AL008626.1-201ENST00000412357 775 ntTSL 2 BASIC3.15□□□□□ -1.91
TMEM258P61165 RPL6P29-201ENST00000414863 865 ntBASIC3.15□□□□□ -1.91
TMEM258P61165 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.15□□□□□ -1.91
TMEM258P61165 MICU1-204ENST00000418483 1212 ntTSL 2 BASIC3.15□□□□□ -1.91
TMEM258P61165 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC3.15□□□□□ -1.91
TMEM258P61165 SLC4A1APP1-201ENST00000419995 602 ntBASIC3.15□□□□□ -1.91
TMEM258P61165 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC3.15□□□□□ -1.91
TMEM258P61165 PROSER3-203ENST00000421853 650 ntAPPRIS ALT2 TSL 3 BASIC3.15□□□□□ -1.91
TMEM258P61165 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC3.15□□□□□ -1.91
TMEM258P61165 PPIAP13-201ENST00000434706 478 ntBASIC3.15□□□□□ -1.91
TMEM258P61165 AC009365.1-201ENST00000436379 751 ntTSL 2 BASIC3.15□□□□□ -1.91
TMEM258P61165 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC3.15□□□□□ -1.91
TMEM258P61165 AC079781.1-201ENST00000441505 394 ntBASIC3.15□□□□□ -1.91
TMEM258P61165 ATP6V1G1P3-201ENST00000442568 280 ntBASIC3.15□□□□□ -1.91
TMEM258P61165 AL161636.2-201ENST00000445179 927 ntBASIC3.15□□□□□ -1.91
TMEM258P61165 MRPL48P1-201ENST00000445390 636 ntBASIC3.15□□□□□ -1.91
TMEM258P61165 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.15□□□□□ -1.91
TMEM258P61165 MIR3681HG-207ENST00000451644 623 ntTSL 3 BASIC3.15□□□□□ -1.91
TMEM258P61165 AC007690.1-201ENST00000451924 468 ntBASIC3.15□□□□□ -1.91
TMEM258P61165 IGHV3-64-201ENST00000454421 431 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
TMEM258P61165 RPL38P3-201ENST00000484463 213 ntBASIC3.15□□□□□ -1.91
TMEM258P61165 ZNF695-204ENST00000487338 826 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
TMEM258P61165 AC073073.1-201ENST00000493920 463 ntBASIC3.15□□□□□ -1.91
TMEM258P61165 AC121161.2-201ENST00000502566 659 ntTSL 3 BASIC3.15□□□□□ -1.91
TMEM258P61165 HSD17B11-203ENST00000507286 851 ntTSL 5 BASIC3.15□□□□□ -1.91
TMEM258P61165 AC116049.2-201ENST00000508572 754 ntTSL 4 BASIC3.15□□□□□ -1.91
TMEM258P61165 LINC01411-206ENST00000515513 770 ntTSL 5 BASIC3.15□□□□□ -1.91
TMEM258P61165 RNU7-179P-201ENST00000516608 68 ntBASIC3.15□□□□□ -1.91
TMEM258P61165 MIR2114-201ENST00000516645 80 ntBASIC3.15□□□□□ -1.91
TMEM258P61165 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC3.15□□□□□ -1.91
TMEM258P61165 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC3.15□□□□□ -1.91
TMEM258P61165 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC3.15□□□□□ -1.91
TMEM258P61165 TMEM269-202ENST00000536543 983 ntAPPRIS P2 TSL 5 BASIC3.15□□□□□ -1.91
TMEM258P61165 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.15□□□□□ -1.91
TMEM258P61165 AC140847.2-201ENST00000545923 501 ntTSL 3 BASIC3.15□□□□□ -1.91
TMEM258P61165 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC3.15□□□□□ -1.91
TMEM258P61165 COG4-212ENST00000564653 590 ntTSL 5 BASIC3.15□□□□□ -1.91
TMEM258P61165 AC019294.2-203ENST00000569596 594 ntTSL 3 BASIC3.15□□□□□ -1.91
TMEM258P61165 AP005328.1-202ENST00000580781 776 ntTSL 3 BASIC3.15□□□□□ -1.91
TMEM258P61165 RNU4ATAC-201ENST00000580972 127 ntBASIC3.15□□□□□ -1.91
TMEM258P61165 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC3.15□□□□□ -1.91
TMEM258P61165 SNRPCP20-201ENST00000588011 210 ntBASIC3.15□□□□□ -1.91
TMEM258P61165 AC020914.4-201ENST00000597690 277 ntBASIC3.15□□□□□ -1.91
TMEM258P61165 VN1R81P-201ENST00000602085 372 ntBASIC3.15□□□□□ -1.91
TMEM258P61165 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC3.15□□□□□ -1.91
TMEM258P61165 AL139220.2-217ENST00000609027 940 ntTSL 5 BASIC3.15□□□□□ -1.91
TMEM258P61165 AC006547.1-211ENST00000609191 828 ntTSL 5 BASIC3.15□□□□□ -1.91
TMEM258P61165 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC3.15□□□□□ -1.91
TMEM258P61165 AL445670.1-201ENST00000618889 801 ntBASIC3.15□□□□□ -1.91
TMEM258P61165 AC005086.4-201ENST00000623065 213 ntBASIC3.15□□□□□ -1.91
TMEM258P61165 AC012629.4-201ENST00000623327 259 ntBASIC3.15□□□□□ -1.91
TMEM258P61165 AP003400.2-201ENST00000624036 666 ntBASIC3.15□□□□□ -1.91
TMEM258P61165 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC3.15□□□□□ -1.91
TMEM258P61165 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.15□□□□□ -1.91
TMEM258P61165 MTCO1P14-201ENST00000441695 1559 ntBASIC3.15□□□□□ -1.91
TMEM258P61165 SAMMSON-226ENST00000642089 1582 ntBASIC3.15□□□□□ -1.91
TMEM258P61165 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
TMEM258P61165 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC3.15□□□□□ -1.91
TMEM258P61165 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
TMEM258P61165 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
TMEM258P61165 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC3.14□□□□□ -1.91
TMEM258P61165 AC017007.4-201ENST00000503353 1352 ntBASIC3.14□□□□□ -1.91
TMEM258P61165 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
TMEM258P61165 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
TMEM258P61165 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
TMEM258P61165 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
TMEM258P61165 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
TMEM258P61165 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
TMEM258P61165 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
TMEM258P61165 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC3.14□□□□□ -1.91
TMEM258P61165 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
TMEM258P61165 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms