Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.53□□□□□ -1.52
PKNOX1P55347 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PKNOX1P55347 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
PKNOX1P55347 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.53□□□□□ -1.52
PKNOX1P55347 LINC02019-201ENST00000608605 2060 ntBASIC5.53□□□□□ -1.52
PKNOX1P55347 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
PKNOX1P55347 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
PKNOX1P55347 AC005042.1-201ENST00000393397 800 ntBASIC5.53□□□□□ -1.52
PKNOX1P55347 AC096921.1-201ENST00000411661 375 ntBASIC5.53□□□□□ -1.52
PKNOX1P55347 GPS2P1-201ENST00000411761 986 ntBASIC5.53□□□□□ -1.52
PKNOX1P55347 AL354890.1-201ENST00000413730 346 ntBASIC5.53□□□□□ -1.52
PKNOX1P55347 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.53□□□□□ -1.52
PKNOX1P55347 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC5.53□□□□□ -1.52
PKNOX1P55347 GAPDHP48-201ENST00000436626 961 ntBASIC5.53□□□□□ -1.52
PKNOX1P55347 AL359265.1-201ENST00000440296 795 ntBASIC5.53□□□□□ -1.52
PKNOX1P55347 TIMM8BP2-201ENST00000445940 251 ntBASIC5.53□□□□□ -1.52
PKNOX1P55347 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC5.53□□□□□ -1.52
PKNOX1P55347 DEFB109A-201ENST00000482450 265 ntBASIC5.53□□□□□ -1.52
PKNOX1P55347 AC021006.1-201ENST00000489849 553 ntBASIC5.53□□□□□ -1.52
PKNOX1P55347 RN7SL193P-201ENST00000491708 276 ntBASIC5.53□□□□□ -1.52
PKNOX1P55347 RBBP4P1-201ENST00000502424 1276 ntBASIC5.53□□□□□ -1.52
PKNOX1P55347 ASNSP4-201ENST00000511103 447 ntBASIC5.53□□□□□ -1.52
PKNOX1P55347 HSD3BP3-201ENST00000514706 994 ntBASIC5.53□□□□□ -1.52
PKNOX1P55347 OR4A17P-201ENST00000526032 904 ntBASIC5.53□□□□□ -1.52
PKNOX1P55347 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC5.53□□□□□ -1.52
PKNOX1P55347 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.53□□□□□ -1.52
PKNOX1P55347 MED21-206ENST00000546323 575 ntTSL 3 BASIC5.53□□□□□ -1.52
PKNOX1P55347 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC5.53□□□□□ -1.52
PKNOX1P55347 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC5.53□□□□□ -1.52
PKNOX1P55347 AC008507.3-201ENST00000585753 472 ntBASIC5.53□□□□□ -1.52
PKNOX1P55347 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC5.53□□□□□ -1.52
PKNOX1P55347 TEX41-293ENST00000630451 690 ntTSL 5 BASIC5.53□□□□□ -1.52
PKNOX1P55347 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.53□□□□□ -1.52
PKNOX1P55347 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
PKNOX1P55347 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.53□□□□□ -1.52
PKNOX1P55347 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.53□□□□□ -1.52
PKNOX1P55347 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.53□□□□□ -1.52
PKNOX1P55347 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
PKNOX1P55347 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
PKNOX1P55347 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PKNOX1P55347 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.53□□□□□ -1.52
PKNOX1P55347 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PKNOX1P55347 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
PKNOX1P55347 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.52□□□□□ -1.53
PKNOX1P55347 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.52□□□□□ -1.53
PKNOX1P55347 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.52□□□□□ -1.53
PKNOX1P55347 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.52□□□□□ -1.53
PKNOX1P55347 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PKNOX1P55347 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PKNOX1P55347 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PKNOX1P55347 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PKNOX1P55347 AC092681.1-201ENST00000297369 291 ntBASIC5.52□□□□□ -1.53
PKNOX1P55347 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.52□□□□□ -1.53
PKNOX1P55347 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.52□□□□□ -1.53
PKNOX1P55347 AC009784.1-201ENST00000426484 460 ntBASIC5.52□□□□□ -1.53
PKNOX1P55347 AC126120.1-201ENST00000431082 470 ntBASIC5.52□□□□□ -1.53
PKNOX1P55347 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC5.52□□□□□ -1.53
PKNOX1P55347 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC5.52□□□□□ -1.53
PKNOX1P55347 PCBP2P1-201ENST00000437262 977 ntBASIC5.52□□□□□ -1.53
PKNOX1P55347 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.52□□□□□ -1.53
PKNOX1P55347 AC093166.3-201ENST00000448785 303 ntBASIC5.52□□□□□ -1.53
PKNOX1P55347 NXT1P1-201ENST00000458481 316 ntBASIC5.52□□□□□ -1.53
PKNOX1P55347 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.52□□□□□ -1.53
PKNOX1P55347 HMGN2P36-201ENST00000529541 409 ntBASIC5.52□□□□□ -1.53
PKNOX1P55347 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC5.52□□□□□ -1.53
PKNOX1P55347 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC5.52□□□□□ -1.53
PKNOX1P55347 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PKNOX1P55347 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC5.52□□□□□ -1.53
PKNOX1P55347 AC090286.3-201ENST00000573133 187 ntBASIC5.52□□□□□ -1.53
PKNOX1P55347 MIR3154-201ENST00000577829 84 ntBASIC5.52□□□□□ -1.53
PKNOX1P55347 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.52□□□□□ -1.53
PKNOX1P55347 AC091167.5-201ENST00000605689 894 ntBASIC5.52□□□□□ -1.53
PKNOX1P55347 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC5.52□□□□□ -1.53
PKNOX1P55347 AC016252.1-201ENST00000609721 474 ntBASIC5.52□□□□□ -1.53
PKNOX1P55347 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.52□□□□□ -1.53
PKNOX1P55347 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.52□□□□□ -1.53
PKNOX1P55347 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.52□□□□□ -1.53
PKNOX1P55347 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.52□□□□□ -1.53
PKNOX1P55347 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PKNOX1P55347 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.52□□□□□ -1.53
PKNOX1P55347 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC5.52□□□□□ -1.53
PKNOX1P55347 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.52□□□□□ -1.53
PKNOX1P55347 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.52□□□□□ -1.53
PKNOX1P55347 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PKNOX1P55347 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
PKNOX1P55347 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.51□□□□□ -1.53
PKNOX1P55347 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PKNOX1P55347 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
PKNOX1P55347 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PKNOX1P55347 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
PKNOX1P55347 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PKNOX1P55347 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
PKNOX1P55347 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PKNOX1P55347 COX6B1P3-201ENST00000312310 260 ntBASIC5.51□□□□□ -1.53
PKNOX1P55347 RNA5SP326-201ENST00000363209 110 ntBASIC5.51□□□□□ -1.53
PKNOX1P55347 RN7SKP81-201ENST00000365603 331 ntBASIC5.51□□□□□ -1.53
PKNOX1P55347 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC5.51□□□□□ -1.53
PKNOX1P55347 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.51□□□□□ -1.53
PKNOX1P55347 BX119904.3-201ENST00000428194 957 ntBASIC5.51□□□□□ -1.53
PKNOX1P55347 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms