Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC6.5□□□□□ -1.37
HMGCS2P54868 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC6.5□□□□□ -1.37
HMGCS2P54868 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC6.5□□□□□ -1.37
HMGCS2P54868 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
HMGCS2P54868 MIR4311-201ENST00000580794 100 ntBASIC6.5□□□□□ -1.37
HMGCS2P54868 RN7SL708P-201ENST00000580952 299 ntBASIC6.5□□□□□ -1.37
HMGCS2P54868 SETP3-201ENST00000581726 813 ntBASIC6.5□□□□□ -1.37
HMGCS2P54868 AC116651.1-201ENST00000609724 556 ntBASIC6.5□□□□□ -1.37
HMGCS2P54868 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
HMGCS2P54868 AC068870.2-201ENST00000620635 389 ntBASIC6.5□□□□□ -1.37
HMGCS2P54868 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
HMGCS2P54868 AC119674.1-217ENST00000641942 1086 ntBASIC6.5□□□□□ -1.37
HMGCS2P54868 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
HMGCS2P54868 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC6.5□□□□□ -1.37
HMGCS2P54868 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
HMGCS2P54868 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
HMGCS2P54868 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
HMGCS2P54868 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
HMGCS2P54868 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
HMGCS2P54868 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
HMGCS2P54868 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
HMGCS2P54868 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
HMGCS2P54868 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
HMGCS2P54868 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC6.49□□□□□ -1.37
HMGCS2P54868 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.49□□□□□ -1.37
HMGCS2P54868 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.49□□□□□ -1.37
HMGCS2P54868 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
HMGCS2P54868 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
HMGCS2P54868 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
HMGCS2P54868 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.49□□□□□ -1.37
HMGCS2P54868 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
HMGCS2P54868 AL137918.1-201ENST00000624542 1922 ntBASIC6.49□□□□□ -1.37
HMGCS2P54868 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
HMGCS2P54868 MIR551A-201ENST00000385042 96 ntBASIC6.49□□□□□ -1.37
HMGCS2P54868 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC6.49□□□□□ -1.37
HMGCS2P54868 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC6.49□□□□□ -1.37
HMGCS2P54868 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC6.49□□□□□ -1.37
HMGCS2P54868 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
HMGCS2P54868 RPS18P6-201ENST00000476880 458 ntBASIC6.49□□□□□ -1.37
HMGCS2P54868 AC079080.1-201ENST00000479841 822 ntBASIC6.49□□□□□ -1.37
HMGCS2P54868 TOMM22P4-201ENST00000511318 336 ntBASIC6.49□□□□□ -1.37
HMGCS2P54868 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC6.49□□□□□ -1.37
HMGCS2P54868 AL121594.2-201ENST00000541658 472 ntBASIC6.49□□□□□ -1.37
HMGCS2P54868 OR11J2P-201ENST00000555298 907 ntBASIC6.49□□□□□ -1.37
HMGCS2P54868 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC6.49□□□□□ -1.37
HMGCS2P54868 MIR4301-201ENST00000577203 66 ntBASIC6.49□□□□□ -1.37
HMGCS2P54868 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC6.49□□□□□ -1.37
HMGCS2P54868 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC6.49□□□□□ -1.37
HMGCS2P54868 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC6.49□□□□□ -1.37
HMGCS2P54868 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC6.49□□□□□ -1.37
HMGCS2P54868 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC6.49□□□□□ -1.37
HMGCS2P54868 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
HMGCS2P54868 AC005725.1-201ENST00000577346 2607 ntBASIC6.49□□□□□ -1.37
HMGCS2P54868 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.49□□□□□ -1.37
HMGCS2P54868 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC6.49□□□□□ -1.37
HMGCS2P54868 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC6.49□□□□□ -1.37
HMGCS2P54868 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
HMGCS2P54868 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
HMGCS2P54868 AL162456.1-201ENST00000634535 2006 ntBASIC6.49□□□□□ -1.37
HMGCS2P54868 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
HMGCS2P54868 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.48□□□□□ -1.37
HMGCS2P54868 MAK-202ENST00000354489 3941 ntTSL 5 BASIC6.48□□□□□ -1.37
HMGCS2P54868 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.48□□□□□ -1.37
HMGCS2P54868 AC007998.4-201ENST00000612496 2533 ntBASIC6.48□□□□□ -1.37
HMGCS2P54868 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
HMGCS2P54868 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
HMGCS2P54868 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC6.48□□□□□ -1.37
HMGCS2P54868 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
HMGCS2P54868 CDY3P-201ENST00000454543 1618 ntBASIC6.48□□□□□ -1.37
HMGCS2P54868 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC6.48□□□□□ -1.37
HMGCS2P54868 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
HMGCS2P54868 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
HMGCS2P54868 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC6.48□□□□□ -1.37
HMGCS2P54868 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
HMGCS2P54868 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
HMGCS2P54868 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
HMGCS2P54868 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
HMGCS2P54868 RNA5SP339-201ENST00000390987 122 ntBASIC6.48□□□□□ -1.37
HMGCS2P54868 LINC01687-201ENST00000416327 795 ntTSL 3 BASIC6.48□□□□□ -1.37
HMGCS2P54868 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC6.48□□□□□ -1.37
HMGCS2P54868 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC6.48□□□□□ -1.37
HMGCS2P54868 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC6.48□□□□□ -1.37
HMGCS2P54868 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC6.48□□□□□ -1.37
HMGCS2P54868 AL645937.3-201ENST00000453647 936 ntBASIC6.48□□□□□ -1.37
HMGCS2P54868 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC6.48□□□□□ -1.37
HMGCS2P54868 TRBV5-2-201ENST00000489095 273 ntBASIC6.48□□□□□ -1.37
HMGCS2P54868 AC078899.1-201ENST00000521432 1185 ntBASIC6.48□□□□□ -1.37
HMGCS2P54868 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC6.48□□□□□ -1.37
HMGCS2P54868 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC6.48□□□□□ -1.37
HMGCS2P54868 AP002884.5-201ENST00000595053 1132 ntBASIC6.48□□□□□ -1.37
HMGCS2P54868 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC6.48□□□□□ -1.37
HMGCS2P54868 Mico1.1-201ENST00000611698 204 ntBASIC6.48□□□□□ -1.37
HMGCS2P54868 WWOX-217ENST00000620008 450 ntTSL 2 BASIC6.48□□□□□ -1.37
HMGCS2P54868 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC6.48□□□□□ -1.37
HMGCS2P54868 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
HMGCS2P54868 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
HMGCS2P54868 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
HMGCS2P54868 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.48□□□□□ -1.37
HMGCS2P54868 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
HMGCS2P54868 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms