Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC6.8□□□□□ -1.32
EPHB3P54753 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
EPHB3P54753 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
EPHB3P54753 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
EPHB3P54753 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.8□□□□□ -1.32
EPHB3P54753 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
EPHB3P54753 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC6.8□□□□□ -1.32
EPHB3P54753 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
EPHB3P54753 RNU1-46P-201ENST00000384425 164 ntBASIC6.8□□□□□ -1.32
EPHB3P54753 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
EPHB3P54753 GCNT1P4-201ENST00000404096 329 ntBASIC6.8□□□□□ -1.32
EPHB3P54753 RN7SKP281-201ENST00000410472 352 ntBASIC6.8□□□□□ -1.32
EPHB3P54753 AC104454.1-201ENST00000421341 1401 ntBASIC6.8□□□□□ -1.32
EPHB3P54753 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC6.8□□□□□ -1.32
EPHB3P54753 DPPA2P1-201ENST00000428060 556 ntBASIC6.8□□□□□ -1.32
EPHB3P54753 AC125238.2-201ENST00000430003 1440 ntBASIC6.8□□□□□ -1.32
EPHB3P54753 FTO-202ENST00000431610 707 ntTSL 3 BASIC6.8□□□□□ -1.32
EPHB3P54753 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
EPHB3P54753 AC007679.3-201ENST00000434035 414 ntBASIC6.8□□□□□ -1.32
EPHB3P54753 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC6.8□□□□□ -1.32
EPHB3P54753 AC084290.1-201ENST00000434995 374 ntBASIC6.8□□□□□ -1.32
EPHB3P54753 RPS7P2-201ENST00000435134 607 ntBASIC6.8□□□□□ -1.32
EPHB3P54753 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC6.8□□□□□ -1.32
EPHB3P54753 MTATP6P23-201ENST00000440153 476 ntBASIC6.8□□□□□ -1.32
EPHB3P54753 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC6.8□□□□□ -1.32
EPHB3P54753 PMS2P9-201ENST00000441237 515 ntBASIC6.8□□□□□ -1.32
EPHB3P54753 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC6.8□□□□□ -1.32
EPHB3P54753 RPL12P26-201ENST00000452430 487 ntBASIC6.8□□□□□ -1.32
EPHB3P54753 AC022415.1-202ENST00000486612 523 ntBASIC6.8□□□□□ -1.32
EPHB3P54753 AC022206.1-201ENST00000495947 347 ntBASIC6.8□□□□□ -1.32
EPHB3P54753 AC111000.2-201ENST00000507775 550 ntBASIC6.8□□□□□ -1.32
EPHB3P54753 SNX18P25-201ENST00000510539 758 ntBASIC6.8□□□□□ -1.32
EPHB3P54753 AC074087.1-201ENST00000512059 724 ntBASIC6.8□□□□□ -1.32
EPHB3P54753 ZNF519P4-201ENST00000514008 125 ntBASIC6.8□□□□□ -1.32
EPHB3P54753 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC6.8□□□□□ -1.32
EPHB3P54753 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC6.8□□□□□ -1.32
EPHB3P54753 AC079064.1-201ENST00000528365 362 ntBASIC6.8□□□□□ -1.32
EPHB3P54753 MTCO2P15-201ENST00000532655 656 ntBASIC6.8□□□□□ -1.32
EPHB3P54753 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC6.8□□□□□ -1.32
EPHB3P54753 AC005832.2-201ENST00000538921 1430 ntBASIC6.8□□□□□ -1.32
EPHB3P54753 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
EPHB3P54753 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC6.8□□□□□ -1.32
EPHB3P54753 MIR4719-201ENST00000585233 84 ntBASIC6.8□□□□□ -1.32
EPHB3P54753 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC6.8□□□□□ -1.32
EPHB3P54753 AC105129.3-201ENST00000605455 485 ntBASIC6.8□□□□□ -1.32
EPHB3P54753 AL031775.1-201ENST00000607014 887 ntBASIC6.8□□□□□ -1.32
EPHB3P54753 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC6.8□□□□□ -1.32
EPHB3P54753 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC6.8□□□□□ -1.32
EPHB3P54753 MIR6861-201ENST00000618657 64 ntBASIC6.8□□□□□ -1.32
EPHB3P54753 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC6.8□□□□□ -1.32
EPHB3P54753 AL357140.4-201ENST00000636827 412 ntBASIC6.8□□□□□ -1.32
EPHB3P54753 MIR1910-201ENST00000636955 80 ntBASIC6.8□□□□□ -1.32
EPHB3P54753 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC6.8□□□□□ -1.32
EPHB3P54753 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
EPHB3P54753 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
EPHB3P54753 B3GNT2-202ENST00000405767 2436 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
EPHB3P54753 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
EPHB3P54753 AC114401.1-201ENST00000484222 2084 ntTSL 2 BASIC6.8□□□□□ -1.32
EPHB3P54753 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
EPHB3P54753 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
EPHB3P54753 AL359694.2-201ENST00000567753 1615 ntBASIC6.79□□□□□ -1.32
EPHB3P54753 AL359195.2-201ENST00000623657 4412 ntBASIC6.79□□□□□ -1.32
EPHB3P54753 OR2AH1P-202ENST00000641232 2744 ntBASIC6.79□□□□□ -1.32
EPHB3P54753 ZNF542P-204ENST00000482727 1305 ntBASIC6.79□□□□□ -1.32
EPHB3P54753 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
EPHB3P54753 AL590542.1-201ENST00000449314 1596 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
EPHB3P54753 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC6.79□□□□□ -1.32
EPHB3P54753 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
EPHB3P54753 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
EPHB3P54753 ASAH1-267ENST00000637991 2399 ntTSL 5 BASIC6.79□□□□□ -1.32
EPHB3P54753 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.79□□□□□ -1.32
EPHB3P54753 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
EPHB3P54753 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
EPHB3P54753 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
EPHB3P54753 RNU5B-4P-201ENST00000363508 111 ntBASIC6.79□□□□□ -1.32
EPHB3P54753 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
EPHB3P54753 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC6.79□□□□□ -1.32
EPHB3P54753 SLC9B1P2-201ENST00000398120 1184 ntBASIC6.79□□□□□ -1.32
EPHB3P54753 RNU4-72P-201ENST00000410754 173 ntBASIC6.79□□□□□ -1.32
EPHB3P54753 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC6.79□□□□□ -1.32
EPHB3P54753 GCA-203ENST00000429691 824 ntTSL 3 BASIC6.79□□□□□ -1.32
EPHB3P54753 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC6.79□□□□□ -1.32
EPHB3P54753 AC069154.1-201ENST00000432914 542 ntBASIC6.79□□□□□ -1.32
EPHB3P54753 GAPDHP75-201ENST00000433910 943 ntBASIC6.79□□□□□ -1.32
EPHB3P54753 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC6.79□□□□□ -1.32
EPHB3P54753 GTF2IP14-201ENST00000441415 586 ntBASIC6.79□□□□□ -1.32
EPHB3P54753 AL645936.1-201ENST00000441979 518 ntBASIC6.79□□□□□ -1.32
EPHB3P54753 RPS10P18-201ENST00000442662 495 ntBASIC6.79□□□□□ -1.32
EPHB3P54753 CXCR2P1-202ENST00000443392 1074 ntBASIC6.79□□□□□ -1.32
EPHB3P54753 RPL5P7-201ENST00000444235 813 ntBASIC6.79□□□□□ -1.32
EPHB3P54753 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
EPHB3P54753 RBMY3AP-201ENST00000449381 1145 ntBASIC6.79□□□□□ -1.32
EPHB3P54753 RPL21P18-201ENST00000469899 480 ntBASIC6.79□□□□□ -1.32
EPHB3P54753 CREM-242ENST00000490511 469 ntTSL 2 BASIC6.79□□□□□ -1.32
EPHB3P54753 AP002453.1-201ENST00000492327 668 ntBASIC6.79□□□□□ -1.32
EPHB3P54753 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC6.79□□□□□ -1.32
EPHB3P54753 AC063943.2-201ENST00000495697 534 ntBASIC6.79□□□□□ -1.32
EPHB3P54753 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC6.79□□□□□ -1.32
EPHB3P54753 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC6.79□□□□□ -1.32
EPHB3P54753 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC6.79□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms